RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 C9IYK1 514 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 ZNF37AP17032 561 aaPredicted RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 RCVRNP35243 200 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 DPP6P42658 865 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 NR2C2P49116 596 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 GJA9P57773 515 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 SIM2Q14190 667 aaPredicted RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 MAP1SQ66K74 1059 aaPredicted RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 ANGPTL8Q6UXH0 198 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 HM13Q8TCT9 377 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 DMRTB1Q96MA1 342 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 MUS81Q96NY9 551 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 C2orf40Q9H1Z8 148 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 OLAHQ9NV23 265 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 CACNA2D2Q9NY47 1150 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 KIF17Q9P2E2 1029 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.4□□□□□ -0.42
USP30-201ENST00000257548 ANGPTL3Q9Y5C1 460 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 SNX8Q9Y5X2 465 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 KANSL1LA0AUZ9 987 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 PGK2P07205 417 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 TPSB2P20231 275 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 TUFMP49411 452 aaKnown RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 MAPRE1Q15691 268 aaKnown RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 AASDHQ4L235 1098 aaPredicted RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 IER5Q5VY09 327 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 FAM91A1Q658Y4 838 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 C15orf52Q6ZUT6 534 aaKnown RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 PIWIL4Q7Z3Z4 852 aaKnown RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 FAM110BQ8TC76 370 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 TMEM74Q96NL1 305 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 ACO2Q99798 780 aaKnown RBP12.4□□□□□ -0.42
USP30-201ENST00000257548 CDT1Q9H211 546 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 EPB41L1Q9H4G0 881 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 MRGBPQ9NV56 204 aa12.4□□□□□ -0.42
USP30-201ENST00000257548 LAMA3Q16787 3333 aa12.4□□□□□ -0.43
USP30-201ENST00000257548 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 RGL2O15211 777 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 SYNCRIPO60506 623 aaKnown RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 PRDX6P30041 224 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 RAB10P61026 200 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ATP6AP1LQ52LC2 224 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 ESRP1Q6NXG1 681 aaKnown RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 ITFG1Q8TB96 612 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 FEM1AQ9BSK4 669 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 RIBC2Q9H4K1 309 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 PNPLA8Q9NP80 782 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 SCHIP1Q9P0W5 487 aaPredicted RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 MAFGO15525 162 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 SNAP91O60641 907 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 GCATO75600 419 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 PIRTP0C851 137 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ZNF24P17028 368 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 CYP4F2P78329 520 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 CYP4F3Q08477 520 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 VAC14Q08AM6 782 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 CDH17Q12864 832 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 TUBB3Q13509 450 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 SQLEQ14534 574 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ARMCX2Q7L311 632 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 HEXDCQ8WVB3 486 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 MOCS1Q9NZB8 636 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 IPO11Q9UI26 975 aaKnown RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 KRBA1A5PL33 1030 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 A8MV72 311 aaPredicted RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 CLDN5O00501 218 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 AURKAO14965 403 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 FKBP9O95302 570 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ZNF26P17031 533 aaPredicted RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 S100A1P23297 94 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ATP5F1P24539 256 aaPredicted RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 EMP3P54852 163 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 MAP3K7CLP57077 242 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 CLCQ05315 142 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 FPGSQ05932 587 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 FKBP9P1Q75LS8 142 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 SLC22A16Q86VW1 577 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ATPAF2Q8N5M1 289 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 RDM1Q8NG50 284 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 SLC10A4Q96EP9 437 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 MRPL45Q9BRJ2 306 aaKnown RBP12.39□□□□□ -0.43
USP30-201ENST00000257548 CEP44Q9C0F1 390 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 RUBCNLQ9H714 662 aa12.39□□□□□ -0.43
USP30-201ENST00000257548 ADAMTSL1Q8N6G6 1762 aa12.38□□□□□ -0.43
USP30-201ENST00000257548 PDZK1P1A8MUH7 402 aa12.38□□□□□ -0.43
USP30-201ENST00000257548 VWA5AO00534 786 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms