RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MAP3K6O95382 1288 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
VPREB3-201ENST00000248948 CPP00450 1065 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 C6P13671 934 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 TGM2P21980 687 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 CA4P22748 312 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 CES1P23141 567 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 PMLP29590 882 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 NR2C2P49116 596 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 IFI35P80217 286 aaPredicted RBP12.86□□□□□ -0.35
VPREB3-201ENST00000248948 RALGDSQ12967 914 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 TFDP2Q14188 446 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 PDK1Q15118 436 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 SHBQ15464 509 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 PPP2R5EQ16537 467 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 TFDP3Q5H9I0 405 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 SPOCD1Q6ZMY3 1216 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 DPPA4Q7L190 304 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 KIAA1328Q86T90 577 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 SLC22A18ASQ8N1D0 253 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 PAF1Q8N7H5 531 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 ACRBPQ8NEB7 543 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 OR13H1Q8NG92 308 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 EXD1Q8NHP7 514 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
VPREB3-201ENST00000248948 CDC6Q99741 560 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 WRAP53Q9BUR4 548 aaKnown RBP12.86□□□□□ -0.35
VPREB3-201ENST00000248948 GOLPH3Q9H4A6 298 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 NOD2Q9HC29 1040 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 CA5BQ9Y2D0 317 aa12.86□□□□□ -0.35
VPREB3-201ENST00000248948 PTPRBP23467 1997 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 CEP295Q9C0D2 2601 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 MMP20O60882 483 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 NEBLO76041 1014 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 PGLSO95336 258 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 CCNB1P14635 433 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 IGFALSP35858 605 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 CLDN2P57739 230 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 PFN3P60673 137 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 MAXP61244 160 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 IL9RQ01113 521 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-201ENST00000248948 TRAF2Q12933 501 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 N4BP2L1Q5TBK1 243 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-201ENST00000248948 MFSD7Q6UXD7 560 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 BZW1Q7L1Q6 419 aaKnown RBP12.85□□□□□ -0.35
VPREB3-201ENST00000248948 PARGQ86W56 976 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 TP53I13Q8NBR0 393 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-201ENST00000248948 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 SETD7Q8WTS6 366 aaKnown RBP12.85□□□□□ -0.35
VPREB3-201ENST00000248948 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 MCCC1Q96RQ3 725 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-201ENST00000248948 SEMA3CQ99985 751 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 SALL4Q9UJQ4 1053 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 HEY1Q9Y5J3 304 aa12.85□□□□□ -0.35
VPREB3-201ENST00000248948 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-201ENST00000248948 hCG_1818297A0A087WSY0 165 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 POM121BA6NF01 834 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 PSMD11O00231 422 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 KCNK3O14649 394 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 FZD6O60353 706 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPREB3-201ENST00000248948 TRIM16O95361 564 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 HLA-DQB2P05538 268 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 ITGAVP06756 1048 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 ELFN1P0C7U0 828 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 TNNT1P13805 278 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 CTNNA2P26232 953 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 LIG3P49916 1009 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 COPS2P61201 443 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 YPEL5P62699 121 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 SIM1P81133 766 aaPredicted RBP12.84□□□□□ -0.35
VPREB3-201ENST00000248948 SHC2P98077 582 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 KIF5AQ12840 1032 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 IRF4Q15306 451 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 TRIP6Q15654 476 aaKnown RBP12.84□□□□□ -0.35
VPREB3-201ENST00000248948 ARMC12Q5T9G4 340 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 Q6ZSR6 202 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 USP45Q70EL2 814 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 KANSL1Q7Z3B3 1105 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 RCOR2Q8IZ40 523 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 LRRC57Q8N9N7 239 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 BMFQ96LC9 184 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 CAMK1GQ96NX5 476 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 LGMNQ99538 433 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
VPREB3-201ENST00000248948 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPREB3-201ENST00000248948 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 PHTF1Q9UMS5 762 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms