RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 FSCBQ5H9T9 825 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 LRRC8EQ6NSJ5 796 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 FBXO46Q6PJ61 603 aaPredicted RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 Q6ZNB5 142 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 SPATA6LQ8N4H0 392 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 DNAJC1Q96KC8 554 aaKnown RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 NDNQ99608 321 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 OLFM1Q99784 485 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 GATA5Q9BWX5 397 aaPredicted RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 MUC3BQ9H195 1237 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 SUDS3Q9H7L9 328 aaPredicted RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 ARMCX1Q9P291 453 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 MARCH4Q9P2E8 410 aaPredicted RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 STK38LQ9Y2H1 464 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 PTPRSQ13332 1948 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 A0A087X1B8 175 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 TMEM114B3SHH9 223 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 TGM5O43548 720 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 BUD23O43709 281 aaKnown RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 HNRNPCL1O60812 293 aaKnown RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 TBL1XO60907 577 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 CTSAP10619 480 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 ALOX15P16050 662 aaPredicted RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 HDCP19113 662 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 PTPN4P29074 926 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 TUBB3Q13509 450 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 RIPK1Q13546 671 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 LAMB3Q13751 1172 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 LDB1Q86U70 411 aaPredicted RBP18.59■□□□□ 0.57
HOXC11-201ENST00000243082 RNF135Q8IUD6 432 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 LMNTD2Q8IXW0 634 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 SCYL1Q96KG9 808 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 CPQQ9Y646 472 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 CAPN14A8MX76 684 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 H2AFYO75367 372 aaKnown RBP18.58■□□□□ 0.56
HOXC11-201ENST00000243082 ZMPSTE24O75844 475 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 PRLP01236 227 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 ATP5BP06576 529 aaKnown RBP18.58■□□□□ 0.56
HOXC11-201ENST00000243082 ZNF783Q6ZMS7 281 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 GAREM2Q75VX8 874 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 OR13C4Q8NGS5 318 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 SREK1Q8WXA9 508 aaKnown RBP18.58■□□□□ 0.56
HOXC11-201ENST00000243082 RILPQ96NA2 401 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 TBC1D10AQ9BXI6 508 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 STN1Q9H668 368 aaKnown RBP18.58■□□□□ 0.56
HOXC11-201ENST00000243082 RIMKLBQ9ULI2 386 aa18.58■□□□□ 0.56
HOXC11-201ENST00000243082 SNAP91O60641 907 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 ATP6V1G2O95670 118 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 MZF1P28698 734 aaPredicted RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 SLC12A2P55011 1212 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 CREMQ03060 361 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 LIPMQ5VYY2 423 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 SPNS2Q8IVW8 549 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 CARNMT1Q8N4J0 409 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 HEXDCQ8WVB3 486 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 MOCOSQ96EN8 888 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 RAB3IPQ96QF0 476 aaPredicted RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 SCUBE2Q9NQ36 999 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 IGSF5Q9NSI5 407 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 XPR1Q9UBH6 696 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 ASB3Q9Y575 518 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 SPO11Q9Y5K1 396 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 OBSL1O75147 1896 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 A8MUI8 341 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 H0Y626 953 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 DLX3O60479 287 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 CCDC22O60826 627 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 RPP40O75818 363 aaKnown RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 GOT2P00505 430 aaKnown RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 SERPINA6P08185 405 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 CES1P23141 567 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 GABRR2P28476 465 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 CA8P35219 290 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 CYP4F8P98187 520 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 SNCBQ16143 134 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 TSNAXIP1Q2TAA8 658 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 HECTD2Q5U5R9 776 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 LILRA6Q6PI73 481 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 LINGO4Q6UY18 593 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 TREML1Q86YW5 311 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 HS6ST3Q8IZP7 471 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 ZNF781Q8N8C0 355 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 GPR150Q8NGU9 434 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 TMA16Q96EY4 203 aaKnown RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 NUDCD1Q96RS6 583 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 TDRD1Q9BXT4 1180 aaKnown RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 LRRC3Q9BY71 257 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 UNKQ9C0B0 810 aaKnown RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 TLE6Q9H808 572 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 IL23AQ9NPF7 189 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 DNAJC28Q9NX36 388 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 ARIH1Q9Y4X5 557 aaPredicted RBP18.57■□□□□ 0.56
HOXC11-201ENST00000243082 OR51B4Q9Y5P0 310 aa18.57■□□□□ 0.56
HOXC11-201ENST00000243082 CCDC162PA2VCL2 907 aa18.56■□□□□ 0.56
HOXC11-201ENST00000243082 HSPA4LO95757 839 aa18.56■□□□□ 0.56
HOXC11-201ENST00000243082 PDHA1P08559 390 aa18.56■□□□□ 0.56
HOXC11-201ENST00000243082 CALB2P22676 271 aa18.56■□□□□ 0.56
HOXC11-201ENST00000243082 IDH3AP50213 366 aa18.56■□□□□ 0.56
HOXC11-201ENST00000243082 PRKAA2P54646 552 aa18.56■□□□□ 0.56
HOXC11-201ENST00000243082 NSUN2Q08J23 767 aaKnown RBP eCLIP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms