RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CDKL1Q00532 357 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 FAM171A1Q5VUB5 890 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 SCUBE3Q8IX30 993 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 RNF168Q8IYW5 571 aaPredicted RBP20.71■□□□□ 0.91
SNX3-201ENST00000230085 ZNF567Q8N184 647 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 ADAMTS16Q8TE57 1224 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 NT5C3BQ969T7 300 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 RCN3Q96D15 328 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 ZNF560Q96MR9 790 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 MRPL1Q9BYD6 325 aaKnown RBP20.71■□□□□ 0.91
SNX3-201ENST00000230085 ACE2Q9BYF1 805 aaPredicted RBP20.71■□□□□ 0.91
SNX3-201ENST00000230085 PRDM12Q9H4Q4 367 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 LRRC4Q9HBW1 653 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 BFARQ9NZS9 450 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 RSL24D1Q9UHA3 163 aaKnown RBP20.71■□□□□ 0.91
SNX3-201ENST00000230085 REV3LO60673 3130 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 TCAF2A6NFQ2 919 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 TRIM64A6NGJ6 449 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 HNRNPRO43390 633 aaKnown RBP20.7■□□□□ 0.9
SNX3-201ENST00000230085 NPHS1O60500 1241 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 H6PDO95479 791 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 PSMB4P28070 264 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 AIF1P55008 147 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 ERVFC1P60507 584 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 BST2Q10589 180 aaKnown RBP20.7■□□□□ 0.9
SNX3-201ENST00000230085 ANO4Q32M45 955 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 MGAT5BQ3V5L5 792 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 INTS6LQ5JSJ4 861 aaKnown RBP20.7■□□□□ 0.9
SNX3-201ENST00000230085 CHSY3Q70JA7 882 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 Q7L0L9 218 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 ANKRD52Q8NB46 1076 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 SUSD3Q96L08 255 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 SENP8Q96LD8 212 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 CNBD2Q96M20 576 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 LGMNQ99538 433 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 COPS7BQ9H9Q2 264 aaPredicted RBP20.7■□□□□ 0.9
SNX3-201ENST00000230085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.7■□□□□ 0.9
SNX3-201ENST00000230085 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.7■□□□□ 0.9
SNX3-201ENST00000230085 PTBP2Q9UKA9 531 aaKnown RBP20.7■□□□□ 0.9
SNX3-201ENST00000230085 VWA8A3KMH1 1905 aa20.7■□□□□ 0.9
SNX3-201ENST00000230085 NCAM2O15394 837 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 MTSS1O43312 755 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 BMP10O95393 424 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 SOD2P04179 222 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 SBK3P0C264 359 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 GOT1P17174 413 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 TFE3P19532 575 aaPredicted RBP20.69■□□□□ 0.9
SNX3-201ENST00000230085 BCAT1P54687 386 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 RHDQ02161 417 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 SLC25A52Q3SY17 297 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 SV2CQ496J9 727 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 HACD2Q6Y1H2 254 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 CCDC185Q8N715 623 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 EFCAB3Q8N7B9 438 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 C12orf29Q8N999 325 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 KLHL32Q96NJ5 620 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 PNPLA3Q9NST1 481 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 TIMM13Q9Y5L4 95 aaPredicted RBP20.69■□□□□ 0.9
SNX3-201ENST00000230085 SNX9Q9Y5X1 595 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.69■□□□□ 0.9
SNX3-201ENST00000230085 TRPC5OSA6NMA1 111 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 H3BNH8 94 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 M0QZQ0 153 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 ZSCAN9O15535 394 aaPredicted RBP20.69■□□□□ 0.9
SNX3-201ENST00000230085 MPSTP25325 297 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 TKTP29401 623 aaKnown RBP20.69■□□□□ 0.9
SNX3-201ENST00000230085 DPP6P42658 865 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 MATKP42679 507 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 UBE3AQ05086 875 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 IFRD2Q12894 506 aaPredicted RBP20.69■□□□□ 0.9
SNX3-201ENST00000230085 MPP3Q13368 585 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 TRIM25Q14258 630 aaKnown RBP20.69■□□□□ 0.9
SNX3-201ENST00000230085 MAPRE2Q15555 327 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 CRYBG2Q8N1P7 616 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 PELI3Q8N2H9 469 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 TSPAN14Q8NG11 270 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 ANKRD60Q9BZ19 345 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 VPS45Q9NRW7 570 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 VANGL2Q9ULK5 521 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 PCDHGB4Q9UN71 923 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 PCDHGB5Q9Y5G0 923 aa20.69■□□□□ 0.9
SNX3-201ENST00000230085 TCRBV3S1A0A5B6 114 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 RNASEH2AO75792 299 aaKnown RBP20.68■□□□□ 0.9
SNX3-201ENST00000230085 LTFP02788 710 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 IRS1P35568 1242 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 ELAVL2Q12926 359 aaKnown RBP20.68■□□□□ 0.9
SNX3-201ENST00000230085 ART3Q13508 389 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 PPP2R5DQ14738 602 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 KCTD21Q4G0X4 260 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 ARL13AQ5H913 290 aaPredicted RBP20.68■□□□□ 0.9
SNX3-201ENST00000230085 RTP2Q5QGT7 225 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 PPM1LQ5SGD2 360 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 C6orf52Q5T4I8 152 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 PACRGLQ8N7B6 248 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 AUTS2Q8WXX7 1259 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 ZNF669Q96BR6 464 aaPredicted RBP20.68■□□□□ 0.9
SNX3-201ENST00000230085 VPS39Q96JC1 886 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 FAR2Q96K12 515 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 TCF25Q9BQ70 676 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 RHOJQ9H4E5 214 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms