RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 Q9H521 79 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 ZBTB26Q9HCK0 441 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 UTP6Q9NYH9 597 aaKnown RBP25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 TBC1D30Q9Y2I9 924 aa25.1■■□□□ 1.61
RUNDC3A-201ENST00000225441 H7C4K7 107 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 IRAK2O43187 625 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 DLX3O60479 287 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 VCLP18206 1134 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 BDNFP23560 247 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 PEX19P40855 299 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 CD151P48509 253 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 NUDT2P50583 147 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 SLC39A12Q504Y0 691 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 SFT2D3Q587I9 215 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 PIGGQ5H8A4 983 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 AFMIDQ63HM1 303 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 SPATA2LQ8IUW3 424 aaPredicted RBP25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 LSMEM2Q8N112 164 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 PQLC1Q8N2U9 271 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 ICA1LQ8NDH6 482 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 KCTD4Q8WVF5 259 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 PGLYRP2Q96PD5 576 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 TREX1Q9NSU2 369 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 NDUFA13Q9P0J0 144 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 ZDHHC2Q9UIJ5 367 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 WASH4PA8MWX3 477 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 MAFKO60675 156 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 ATP5F1P24539 256 aaPredicted RBP25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 TRIP10Q15642 601 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 PSMD5Q16401 504 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 ANKS3Q6ZW76 656 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 CELF6Q96J87 481 aaKnown RBP25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 RANBP9Q96S59 729 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 SH3GL3Q99963 347 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 SHCBP1LQ9BZQ2 653 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 ARNT2Q9HBZ2 717 aa25.09■■□□□ 1.61
RUNDC3A-201ENST00000225441 AIM2O14862 343 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 PHGDHO43175 533 aaKnown RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 DENRO43583 198 aaKnown RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 TBC1D4O60343 1298 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 CCR1P32246 355 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 GALNT1Q10472 559 aaPredicted RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 MSLNQ13421 630 aaPredicted RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 NFE2Q16621 373 aaPredicted RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 ZNF423Q2M1K9 1284 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 USP41Q3LFD5 358 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 TCHHL1Q5QJ38 904 aaPredicted RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 RWDD4Q6NW29 188 aaKnown RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 SLC41A1Q8IVJ1 513 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 TMEM169Q96HH4 297 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 ABHD8Q96I13 439 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 TUBGCP5Q96RT8 1024 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 SMOC2Q9H3U7 446 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 WDR55Q9H6Y2 383 aaPredicted RBP25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 CLIC5Q9NZA1 410 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 UBP1Q9NZI7 540 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 SNX10Q9Y5X0 201 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 NLRC5Q86WI3 1866 aa25.08■■□□□ 1.61
RUNDC3A-201ENST00000225441 DFFAO00273 331 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 VAPBO95292 243 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 ABCG1P45844 678 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 MAPRE2Q15555 327 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 RANBP10Q6VN20 620 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 KDM1BQ8NB78 822 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 CEP70Q8NHQ1 597 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 SHKBP1Q8TBC3 707 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 TSPAN17Q96FV3 270 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 ZBED2Q9BTP6 218 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 FICDQ9BVA6 458 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 EML4Q9HC35 981 aaKnown RBP25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 SPG21Q9NZD8 308 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 XPR1Q9UBH6 696 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC4A7Q9Y6M7 1214 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 RNASEH1O60930 286 aaKnown RBP25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 PEX2P28328 305 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 ALDH1A3P47895 512 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 RABGGTBP53611 331 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 SLC12A2P55011 1212 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 MMEL1Q495T6 779 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 RARS2Q5T160 578 aaKnown RBP25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 ADCY4Q8NFM4 1077 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 DTNAQ9Y4J8 743 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 INSL6Q9Y581 213 aa25.07■■□□□ 1.6
RUNDC3A-201ENST00000225441 PAPSS2O95340 614 aaPredicted RBP25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 PENKP01210 267 aaPredicted RBP25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 CAPNS1P04632 268 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 ME2P23368 584 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 EPHA3P29320 983 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 PSMD8P48556 350 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 HSPA13P48723 471 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 CLCN5P51795 746 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 LPCAT4Q643R3 524 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 NAIF1Q69YI7 327 aaPredicted RBP25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 PRSS55Q6UWB4 352 aaPredicted RBP25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 RSPO2Q6UXX9 243 aaPredicted RBP25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 HERC6Q8IVU3 1022 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 FIBCD1Q8N539 461 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 IPMKQ8NFU5 416 aa25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 SPDYE1Q8NFV5 336 aaPredicted RBP25.06■■□□□ 1.6
RUNDC3A-201ENST00000225441 FUBP3Q96I24 572 aaKnown RBP eCLIP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms