RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 OR10Q1Q8NGQ4 319 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 SPPL2BQ8TCT7 592 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 HASPINQ8TF76 798 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 CDCA5Q96FF9 252 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 CCDC138Q96M89 665 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 TKTL2Q9H0I9 626 aa16.85■□□□□ 0.29
CTDP1-201ENST00000075430 UTP6Q9NYH9 597 aaKnown RBP16.85■□□□□ 0.29
CTDP1-201ENST00000075430 RECQL4O94761 1208 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 CLCN2P51788 898 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 SNX16P57768 344 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 CDK18Q07002 472 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 DNAJC14Q6Y2X3 702 aaPredicted RBP16.84■□□□□ 0.29
CTDP1-201ENST00000075430 TMCO5AQ8N6Q1 288 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 BRD8Q9H0E9 1235 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 UNC93B1Q9H1C4 597 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
CTDP1-201ENST00000075430 OR12D3Q9UGF7 316 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 MID2Q9UJV3 735 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 KPNA6O60684 536 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 ALOX15P16050 662 aaPredicted RBP16.84■□□□□ 0.29
CTDP1-201ENST00000075430 PRDX6P30041 224 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 MAGEA6P43360 314 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 IST1P53990 364 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 SLC26A9Q7LBE3 791 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 APPL2Q8NEU8 664 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 RHOJQ9H4E5 214 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 MID1IP1Q9NPA3 183 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 STAP1Q9ULZ2 295 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 PIN4Q9Y237 131 aaKnown RBP16.84■□□□□ 0.29
CTDP1-201ENST00000075430 A0A0J9YYE9 177 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 TRPC5OSA6NMA1 111 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 ATICP31939 592 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 GGT5P36269 586 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 FPGSQ05932 587 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 RAB39AQ14964 217 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 ELMSAN1Q6PJG2 1045 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 RBM12BQ8IXT5 1001 aaKnown RBP16.84■□□□□ 0.29
CTDP1-201ENST00000075430 ANKRD52Q8NB46 1076 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 PABPC5Q96DU9 382 aaKnown RBP16.84■□□□□ 0.29
CTDP1-201ENST00000075430 PLEKHA8Q96JA3 519 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 YIPF2Q9BWQ6 316 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 ASB7Q9H672 318 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 FANCEQ9HB96 536 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 AASSQ9UDR5 926 aa16.84■□□□□ 0.29
CTDP1-201ENST00000075430 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.83■□□□□ 0.29
CTDP1-201ENST00000075430 I6L893 689 aaPredicted RBP16.83■□□□□ 0.29
CTDP1-201ENST00000075430 AP1G1O43747 822 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 FASP25445 335 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 HMOX2P30519 316 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 PFKFB4Q16877 469 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 WSCD1Q658N2 575 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 C4orf22Q6V702 233 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 TFAP2DQ7Z6R9 452 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 RETREG3Q86VR2 466 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 ERO1BQ86YB8 467 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 CENPSQ8N2Z9 138 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 SH3RF2Q8TEC5 729 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 NSUN5Q96P11 429 aaKnown RBP16.83■□□□□ 0.29
CTDP1-201ENST00000075430 TCF12Q99081 682 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 EPB41L1Q9H4G0 881 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 SEMA4BQ9NPR2 832 aaPredicted RBP16.83■□□□□ 0.29
CTDP1-201ENST00000075430 POLE4Q9NR33 117 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 TRIM17Q9Y577 477 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 CORINQ9Y5Q5 1042 aa16.83■□□□□ 0.29
CTDP1-201ENST00000075430 UBA6A0AVT1 1052 aaPredicted RBP16.83■□□□□ 0.28
CTDP1-201ENST00000075430 GFAPP14136 432 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 CDH17Q12864 832 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 SPIDRQ14159 915 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 TRIM16LQ309B1 348 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 TSTD2Q5T7W7 516 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 TICAM1Q8IUC6 712 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 TRPC4APQ8TEL6 797 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 GPATCH1Q9BRR8 931 aaKnown RBP16.83■□□□□ 0.28
CTDP1-201ENST00000075430 WDCPQ9H6R7 721 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 MPP6Q9NZW5 540 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 FBXO5Q9UKT4 447 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 TRAF6Q9Y4K3 522 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 PROZP22891 400 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 PSMA4P25789 261 aaKnown RBP16.83■□□□□ 0.28
CTDP1-201ENST00000075430 ADRA1BP35368 520 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 ENPEPQ07075 957 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 MERTKQ12866 999 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 SLC25A52Q3SY17 297 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 TMEM135Q86UB9 458 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 STK32CQ86UX6 486 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 ANKRD13AQ8IZ07 590 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 ZBTB8BQ8NAP8 495 aaPredicted RBP16.83■□□□□ 0.28
CTDP1-201ENST00000075430 BEST2Q8NFU1 509 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 HDAC10Q969S8 669 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 ZFP42Q96MM3 310 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 U3KQV3 271 aa16.83■□□□□ 0.28
CTDP1-201ENST00000075430 IL7RP16871 459 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 GRB7Q14451 532 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 PDZD4Q76G19 769 aaPredicted RBP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 DHRSXQ8N5I4 330 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 HMGCLL1Q8TB92 370 aa16.82■□□□□ 0.28
CTDP1-201ENST00000075430 DUS2Q9NX74 493 aaKnown RBP16.82■□□□□ 0.28
CTDP1-201ENST00000075430 SLAMF8Q9P0V8 285 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms