RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Chmp2aQ9DB34 222 aa12.84□□□□□ -0.35
Prpf40a-206ENSMUST00000209364 Vmn1r65Q9EPS7 332 aa12.84□□□□□ -0.35
Prpf40a-206ENSMUST00000209364 Fgf22Q9ESS2 162 aa12.84□□□□□ -0.35
Prpf40a-206ENSMUST00000209364 Pi16Q9ET66 489 aa12.84□□□□□ -0.35
Prpf40a-206ENSMUST00000209364 Scamp5Q9JKD3 235 aa12.84□□□□□ -0.35
Prpf40a-206ENSMUST00000209364 Homer2Q9QWW1 354 aa12.84□□□□□ -0.35
Prpf40a-206ENSMUST00000209364 Map3k6Q9WTR2 1291 aa12.84□□□□□ -0.35
Prpf40a-206ENSMUST00000209364 Olfr625-ps1A0A140T8L4 321 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Calhm3J3QMI4 347 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 BhmtO35490 407 aaKnown RBP12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Icam1P13597 537 aaKnown RBP12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Tsta3P23591 321 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 DckP43346 260 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Psma2P49722 234 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 EsrrgP62509 458 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Traf6P70196 530 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Pdss1Q33DR2 409 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Tmem247Q497K7 211 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Krt32Q62168 407 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Ndrg1Q62433 394 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Trim24Q64127 1051 aaKnown RBP12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 N6amt1Q6SKR2 214 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Trpm4Q7TN37 1213 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Krr1Q8BGA5 380 aaKnown RBP12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Znf76Q8BMU0 568 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Clec1aQ8BWY2 269 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 CopaQ8CIE6 1224 aaKnown RBP12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Cnot6Q8K3P5 557 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Vmn1r213Q8R278 384 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Slc35f5Q8R314 524 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Olfr617Q8VGA1 318 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Eif2b2Q99LD9 351 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Abtb1Q99LJ2 478 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Grk2Q99MK8 689 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Ergic3Q9CQE7 383 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Tssk3Q9D2E1 268 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Dnajb4Q9D832 337 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 ParvbQ9ES46 365 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Epm2aQ9WUA5 330 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 CN725425A0A087WRU1 652 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Veph1A1A535 833 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Fam171a2A2A699 822 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Gm8113E0CXS8 587 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Zfp788E9Q980 884 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Fbrsl1E9Q9T0 1031 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 FaahO08914 579 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Vps45P97390 570 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 McuQ3UMR5 350 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Ces5aQ6AW46 575 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Olfr295Q7TS08 309 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Tmem202Q80W35 275 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Slc7a4Q8BLQ7 635 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Fra10ac1Q8BP78 315 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Cops7bQ8BV13 264 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Stx16Q8BVI5 326 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Pde10aQ8CA95 790 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Defb19Q8K3I8 83 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Tas1r2Q925I4 843 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Rnf11Q9QYK7 154 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Asb4Q9WV71 426 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Pex11bQ9Z210 259 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 PtprfA2A8L5 1898 aa12.83□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Btbd35f21A0A140T8Q5 498 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Fibcd1A2AV25 459 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Zscan4bE9Q3G0 505 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Vmn1r39G3UWE6 305 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Btbd35f22J3QN64 498 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Ercc2O08811 760 aaKnown RBP12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Dnmt3bO88509 859 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Tuba4aP68368 448 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Pecam1Q08481 727 aaKnown RBP12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Fubp3Q3TIX6 575 aaKnown RBP12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Alkbh5Q3TSG4 395 aaKnown RBP12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Slc17a7Q3TXX4 560 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Trim67Q505D9 768 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Fbxw2Q60584 422 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 DbhQ64237 622 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Cfap97Q6ZPR1 541 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Pdk1Q8BFP9 434 aaKnown RBP12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Gemin8Q8BHE1 238 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Clrn3Q8BHH8 226 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Lacc1Q8BZT9 430 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Rmnd1Q8CI78 450 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Fcho1Q8K285 873 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Ppa2Q91VM9 330 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Cyp2c70Q91W64 489 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Mrpl1Q99N96 336 aaKnown RBP12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Mcm8Q9CWV1 833 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 S100a14Q9D2Q8 104 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Q9D9D9 101 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Erap1Q9EQH2 930 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Stk19Q9JHN8 254 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Gm7682A0A0J9YUM1 481 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Gm29133A0A1B0GT72 266 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 IsxA1A546 240 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Gm13212B1ASQ7 799 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Klhl4B1AZR0 717 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Osbpl8B9EJ86 889 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Ccdc62E9PVD1 701 aa12.82□□□□□ -0.36
Prpf40a-206ENSMUST00000209364 Dsg3O35902 993 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 70.8 ms