RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mtx3D3YTP3 312 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 JundP15066 341 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gsdmc2Q2KHK6 480 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Olfml2bQ3V1G4 746 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Bcl2l1Q64373 233 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Eme1Q8BJW7 570 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Wnt9aQ8R5M2 365 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 LiasQ99M04 373 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 CenpsQ9D084 142 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ddx59Q9DBN9 619 aa15.64■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Prdm8Q8BZ97 687 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Dennd1cQ8CFK6 786 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pax3P24610 479 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Nedd8P29595 81 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Scrn3Q3TMH2 418 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ntrk1Q3UFB7 799 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ddx4Q61496 702 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 VwdeQ6DFV8 926 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Q6PAC4 1279 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rnf208Q8K0W3 265 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 LipmQ8K2A6 422 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mkl1Q8K4J6 964 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mzt2Q9CQ25 159 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 PompQ9CQT5 141 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Piwil1Q9JMB7 862 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Nrf1Q9WU00 503 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Bscl2Q9Z2E9 383 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Catsperg2C6KI89 1145 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Grk4O70291 574 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cxcr3O88410 367 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Il3P01586 166 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 HadhQ61425 314 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gpbp1l1Q6NZP2 473 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Inpp4bQ6P1Y8 924 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Wdtc1Q80ZK9 677 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mark1Q8VHJ5 795 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ddx21Q9JIK5 851 aaKnown RBP15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 AmacrO09174 381 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mcpt1P11034 246 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Egfl8Q6GUQ1 293 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 4930503B20RikQ80ZP0 234 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Stk32aQ8BGW6 398 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cpsf7Q8BTV2 471 aaKnown RBP15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pnpla8Q8K1N1 776 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pcdhga4Q91XY4 930 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Lysmd3Q99LE3 305 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Clcn2Q9R0A1 908 aa15.63■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cntnap3E9PY62 1287 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cldn5O54942 218 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 CkmP07310 381 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tap1P21958 724 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Smpdl3aP70158 445 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Usp7Q6A4J8 1103 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 SvoplQ6PDF3 494 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Arhgap28Q8BN58 729 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Taf10Q8K0H5 218 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Snapc1Q8K0S9 389 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Olfr345Q8VGK4 311 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Pcdh18Q8VHR0 1134 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cyp4a29A0A087WPC3 509 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm3147A0A0J9YU88 481 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm10424A0A0J9YVD0 481 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm7971J3QMM8 481 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Asna1O54984 348 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 TpbpaP13438 124 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Q5EBG8 199 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Cyp3a16Q64481 504 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Chst10Q6PGK7 356 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tspan18Q80WR1 248 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Slc17a6Q8BLE7 582 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Clptm1lQ8BXA5 539 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mab21L3Q8CI17 429 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Dlk2Q8K1E3 382 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Itm2cQ91VK4 269 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tmco1Q921L3 188 aaKnown RBP15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Hmg20aQ9DC33 346 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gmeb1Q9JL60 562 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Epm2aQ9WUA5 330 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm28897A0A087WP44 222 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ssxb8B1AY40 170 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Dnase1l3O55070 310 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ap2a1P17426 977 aaKnown RBP15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Grb7Q03160 535 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Trafd1Q3UDK1 580 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 GapdhsQ64467 440 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Olfr792Q7TRH9 311 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Epm2aip1Q8VEH5 606 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tas1r2Q925I4 843 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 TheglQ9DA15 459 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Ddi1Q9DAF3 408 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 RhojQ9ER71 214 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Clcn5Q9WVD4 746 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 LipaQ9Z0M5 397 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 HaspinQ9Z0R0 754 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Rpl9-ps1S4R1R7 191 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Gm3164L7N2B9 238 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Tbxas1P36423 533 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 TfamP40630 243 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Mapk1P63085 358 aa15.62■□□□□ 0.09
Ccdc88b-201ENSMUST00000113440 Nlrc4Q3UP24 1024 aa15.62■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms