RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Cyb561d2Q9WUE3 222 aa21.34■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Pcm1Q9R0L6 2025 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Myo18aQ9JMH9 2050 aaKnown RBP21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 4933424G06RikA0A140LIP3 267 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fbxl18E9PYR1 771 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cd9P40240 226 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 ItgavP43406 1044 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cnr2P47936 347 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 PtpaP58389 323 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Rin3P59729 980 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Trim71Q1PSW8 855 aaKnown RBP21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Zbtb16Q3UQ17 673 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Q6GQU0 248 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Zbtb24Q80X44 710 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Exoc3l1Q8BI71 739 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 SheQ8BSD5 492 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Pglyrp2Q8VCS0 530 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ubox5Q925F4 539 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Nt5c3aQ9D020 331 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Actn2Q9JI91 894 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Orc3Q9JK30 715 aaKnown RBP21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cyp3a41aQ9JMA7 504 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Asb4Q9WV71 426 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tnrc18Q80WC3 2878 aa21.33■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Acnat1A2AKK5 416 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Adamts14E9PX39 1209 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gm7275E9Q1B3 247 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Rfx2P48379 717 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Trim43bP86448 445 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Fbxw18Q3TSA9 469 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ppp1r7Q3UM45 361 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Zdhhc18Q5Y5T2 380 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Foxj1Q61660 421 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Hs3st2Q673U1 367 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Scd4Q6T707 353 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Olfr366Q7TRY4 309 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Dennd1cQ8CFK6 786 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 PygbQ8CI94 843 aaKnown RBP21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 DlstQ9D2G2 454 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Sema4fQ9Z123 777 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Rps6kb2Q9Z1M4 485 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Myo10F8VQB6 2062 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 SpaarA0A1B0GSZ0 75 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Vmn2r104E9Q2J5 860 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ccdc149F6V035 524 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Pdcd2P46718 343 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Arhgap44Q5SSM3 814 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gbp4Q61107 620 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 CcnhQ61458 323 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Spa17Q62252 149 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Pnma8aQ80VM8 430 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Nup93Q8BJ71 819 aaKnown RBP21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 CptpQ8BS40 216 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cpsf7Q8BTV2 471 aaKnown RBP21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Zfp398Q8BV16 643 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Znf668Q8K2R5 619 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Impg1Q8R1W8 798 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Syt12Q920N7 421 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 PdiltQ9DAN1 588 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ap4b1Q9WV76 738 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ror1Q9Z139 937 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 H2afb2S4R1M3 115 aa21.32■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cep85lA0A1W2P884 806 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Olfr742A2RTP5 311 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cylc2B1AWN8 422 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Tnk2O54967 1055 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ptger3P30557 365 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Nat9Q3UG98 241 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Dyrk2Q5U4C9 599 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cxcl17Q5UW37 119 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Arcn1Q5XJY5 511 aaKnown RBP21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Htr1aQ64264 421 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Elp6Q8BK75 266 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Fam221bQ8C627 487 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 MmaaQ8C7H1 415 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 AmotQ8VHG2 1126 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Serpina3nQ91WP6 418 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Dnajc3Q91YW3 504 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 GzmnQ920S1 248 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 AdprmQ99KS6 340 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 AadacQ99PG0 398 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Kif9Q9WV04 790 aa21.31■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gm14459A2BI73 179 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ttll11A4Q9F4 727 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ankrd34aB2RW11 495 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Adcy1O88444 1118 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Igf2bp1O88477 577 aaKnown RBP21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 CblP22682 913 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Sult1e1P49891 295 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ap1s1P61967 158 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Psmb4P99026 264 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Zmym5Q3U2E2 627 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 1810049J17RikQ3V2G9 153 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Amer3Q6NS69 780 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ccdc85bQ6PDY0 202 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gm6377Q8BHV4 303 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Aph1bQ8C7N7 257 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Trpm8Q8R4D5 1104 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Pcdha6Q91Y14 946 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Lpgat1Q91YX5 370 aa21.3■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms