RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Snrnp48Q9D361 337 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Fam90a1bQ9D4F3 419 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Cldn22Q9D7U6 220 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Serpinb9bQ9DAV6 377 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Ndst3Q9EQH7 873 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Slc13a1Q9JHI4 594 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Rasgrp2Q9QUG9 608 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Rbck1Q9WUB0 508 aa18.28■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Gm20721E9Q2U8 318 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Sdc4O35988 198 aaKnown RBP18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Stam2O88811 523 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 P01669 111 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Yap1P46938 488 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 AdslP54822 484 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 CstaP56567 97 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Grid2ipQ0QWG9 1203 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Trim71Q1PSW8 855 aaKnown RBP18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Arid5aQ3U108 590 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Parp3Q3ULW8 533 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 RhocQ62159 193 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Chst10Q6PGK7 356 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Slc41a1Q8BJA2 512 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Mapkap1Q8BKH7 522 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Plin5Q8BVZ1 463 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Fnbp1lQ8K012 605 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Myoz3Q8R4E4 245 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Rxfp2Q91ZZ5 737 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Retreg3Q9CQV4 466 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Slc39a5Q9D856 535 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Trip4Q9QXN3 581 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Ern2Q9Z2E3 911 aa18.27■□□□□ 0.52
Chmp6-201ENSMUST00000026434 Gm5930D3Z257 264 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Ldb2O55203 373 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Igf2bp1O88477 577 aaKnown RBP18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Coro1aO89053 461 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Aff3P51827 1254 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Wbp2P97765 261 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Ak8Q32M07 479 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Foxr1Q3UTB7 268 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 StradaQ3UUJ4 431 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Dusp16Q6PCP3 660 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Ints7Q7TQK1 966 aaKnown RBP18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Dnajc6Q80TZ3 938 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 C5ar2Q8BW93 344 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Tmem154Q8C4Q9 181 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 TdrpQ8C5P7 182 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Pcyox1lQ8C7K6 495 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Lrif1Q8CDD9 755 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Ca12Q8CI85 354 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Ccdc71Q8VEG0 433 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Tekt2Q922G7 430 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Ndufb5Q9CQH3 189 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Rex1bdQ9CYZ6 169 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 PigqQ9QYT7 581 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 B9d1Q9R1S0 204 aa18.26■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Eif2b3B1AUN2 452 aaKnown RBP18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Zfp846G3X996 541 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Pknox1O70477 436 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 AldoaP05064 364 aaKnown RBP18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 KitP05532 979 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 PolP11369 1281 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 PfklP12382 780 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Mthfd2P18155 350 aaKnown RBP18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Smpdl3bP58242 456 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Inpp5jP59644 1003 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 AurkaP97477 395 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Pfdn6Q03958 127 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Cdkl4Q3TZA2 342 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Gpr174Q3U507 335 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Mansc4Q3UU94 337 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Marveld2Q3UZP0 555 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Zfp956Q3UZY6 572 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 1810049J17RikQ3V2G9 153 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Xkr5Q5GH66 676 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Olfr213Q7TS32 327 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Rassf6Q80UQ2 353 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Insig1Q8BGI3 259 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Gpr21Q8BX79 349 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Pdcd2lQ8C5N5 364 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 VitQ8VHI5 650 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Ndc80Q9D0F1 642 aaKnown RBP18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Tubb3Q9ERD7 450 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Cdkl2Q9QUK0 568 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Itgb1bp2Q9R000 350 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 SrcapA0A087WQ44 3271 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Zmynd12A2BGJ5 363 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 A630010A05RikA9C473 232 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Mtx3D3YTP3 312 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Fbxl18E9PYR1 771 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Gm8257E9Q8R3 264 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Tsga10ipF7A1F0 157 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Nsmce4aG3XA30 381 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Galnt1O08912 559 aaKnown RBP18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Nrg3O35181 713 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 P04214 136 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 PrnpP04925 254 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 AlplP09242 524 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 CremP27699 357 aa18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Tial1P70318 392 aaKnown RBP18.25■□□□□ 0.51
Chmp6-201ENSMUST00000026434 Lrrc47Q505F5 581 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms