RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Pcdha2Q91Y17 948 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Emc3Q99KI3 261 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tma16Q9CR02 221 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Xpo7Q9EPK7 1087 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ccdc86Q9JJ89 426 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 NumbQ9QZS3 653 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pds5aQ6A026 1332 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 CitP49025 2055 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Chil5A0A0G2JDS2 431 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rap1gapA2ALS5 663 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm12666A2AMD0 254 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Stpg3A2RSX4 306 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Olfr237-ps1K9J725 310 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 BhmtO35490 407 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Hoxd4P10628 250 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Spp1P10923 294 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tulp2P46686 562 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Alox5P48999 674 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 UrosP51163 265 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gpc4P51655 557 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ndufs6P52503 116 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gabrb2P63137 512 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Vps45P97390 570 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 CrtamQ149L7 389 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 GsapQ3TCV3 858 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Cdk10Q3UMM4 360 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Znf579Q80VM4 562 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 AardQ811W1 167 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 SvopQ8BFT9 548 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Echs1Q8BH95 290 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Snx17Q8BVL3 470 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slc8a2Q8K596 921 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ero1bQ8R2E9 467 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Olfr985Q8VGB4 311 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Q9CXL3 195 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Dcun1d5Q9CXV9 237 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Bcas2Q9D287 225 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 ApipQ9WVQ5 241 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Trip11E9Q512 1976 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm6657A0A1B0GRJ3 277 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Celf5D3Z4T1 395 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pgbd1E9Q492 415 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Lrrc31F6VYM1 502 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm8909G3UXE9 396 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pabpc4lG5E8X2 370 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Galnt1O08912 559 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 CaluO35887 315 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 LtfP08071 707 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Hdac2P70288 488 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ugt3a1Q3UP75 523 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Itga7Q61738 1179 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Jak3Q62137 1100 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Trim24Q64127 1051 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Q6GQV0 436 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 RimklbQ80WS1 387 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Palm2Q8BR92 376 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tprg1Q8CB49 279 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mamdc2Q8CG85 686 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Aqp12Q8CHJ2 290 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Alg9Q8VDI9 611 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Atp13a2Q9CTG6 1169 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mau2Q9D2X5 619 aaKnown RBP11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 CabyrQ9D424 453 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Akt3Q9WUA6 479 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tle2Q9WVB2 767 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Bcl10Q9Z0H7 233 aa11.59□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mocs3A2BDX3 460 aaKnown RBP11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 9330159F19RikD3Z623 648 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Shoc2O88520 582 aaKnown RBP11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 DhfrP00375 187 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Mtnd4P03911 459 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 ChgbP16014 677 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 TP20293 436 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Psmb9P28076 219 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Cfl2P45591 166 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Rad54lP70270 747 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Parp8Q3UD82 852 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Krt76Q3UV17 594 aaKnown RBP11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 EndouQ3V188 412 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Prkaa1Q5EG47 559 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 G2e3Q5RJY2 716 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Far2Q7TNT2 515 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Fbxo44Q8BK26 255 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Tgif2Q8C0Y1 237 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Ebf4Q8K4J2 599 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Mtss1Q8R1S4 759 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 McmbpQ8R3C0 642 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Gpn2Q8VEJ1 310 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Zfp623Q9CY99 499 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Tmed11Q9D2R4 215 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Phf6Q9D4J7 364 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Ca5bQ9QZA0 317 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Mta2Q9R190 668 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Rbck1Q9WUB0 508 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Fam171a2A2A699 822 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Tbkbp1A2A9T0 611 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Tldc2A2ACG1 198 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Timm44O35857 452 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Zp3P10761 424 aa11.58□□□□□ -0.56
Sdc1-201ENSMUST00000020911 Ppm1bP36993 390 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms