RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Col2a1P28481 1487 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Vmn2r24D3YUI0 854 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Matn2O08746 956 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Pde9aO70628 534 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Lamp1P11438 406 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Fdft1P53798 416 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 AxlQ00993 888 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Eml1Q05BC3 814 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Nomo1Q6GQT9 1214 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 AtminQ6P9S1 818 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Far2Q7TNT2 515 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Tmtc3Q8BRH0 920 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Prkaa2Q8BRK8 552 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 UstQ8BUB6 407 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Ctxn3Q8BXZ0 80 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Exd1Q8CDF7 570 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Tspan8Q8R3G9 235 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Gstm4Q8R5I6 218 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 NamptQ99KQ4 491 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Ddx50Q99MJ9 734 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Ndufaf7Q9CWG8 436 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Chaf1bQ9D0N7 572 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Gsdmdc1Q9D8T2 487 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 IgtpQ9DCE9 423 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Tlr6Q9EPW9 795 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Mmp19Q9JHI0 527 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 CtsmQ9JL96 333 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Spag6Q9JLI7 507 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Gm4756A0A140LIS8 335 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Phf11cB4XVP9 339 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Ism2D3Z6A3 493 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Gm17175E9Q528 179 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Cd151O35566 253 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Slc6a20bO88575 635 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Mbl1P39039 239 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Pold1P52431 1105 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Rnf157Q3TEL6 685 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 MogQ61885 246 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Sez6lQ6P1D5 963 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Olfr698Q7TRN4 311 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Cxcr1Q810W6 351 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Gtf3c4Q8BMQ2 817 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 4932411N23RikQ8C0S0 470 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Thop1Q8C1A5 687 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Prrg2Q8R182 198 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Slc6a20aQ8VDB9 592 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Pramel1Q99MW3 458 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 NoctO35710 429 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Gjd2O54851 321 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Oaz1P54369 227 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Smpdl3bP58242 456 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Pim3P58750 326 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 YwhahP68510 246 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Ifi47Q61635 420 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Stmnd1Q6P3A1 279 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Amigo1Q80ZD8 492 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 B3galnt2Q8BG28 504 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Ppme1Q8BVQ5 386 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Sfrp1Q8C4U3 314 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Rsph1Q8VIG3 301 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Mrps2Q924T2 291 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Rnf31Q924T7 1066 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Snrpb2Q9CQI7 225 aaKnown RBP11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Zscan12Q9Z1D7 501 aa11.53□□□□□ -0.56
Herc4-201ENSMUST00000020258 Trbv4A0A075B5I2 113 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Olfr566A0A1B0GST0 319 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Phf11bB4XVQ1 276 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Gm3259D3YUK0 475 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Sema3aO08665 772 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Fpr-rs3O88537 343 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 HunkO88866 714 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 PhexP70669 749 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Dnajb14Q149L6 379 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Wdr36Q3TAQ9 899 aaKnown RBP11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 MlipQ5FW52 269 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Fscn1Q61553 493 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Mppe1Q80XL7 396 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Arl5aQ80ZU0 179 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Zfp418Q8BFS8 652 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Frs2Q8C180 508 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Fam78aQ8C552 283 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Treml1Q8K558 317 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Ace2Q8R0I0 805 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Impg1Q8R1W8 798 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Rem2Q8VEL9 341 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Fam192aQ91WE2 254 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Rmnd5bQ91YQ7 393 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Fndc8Q9D2H8 321 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Plscr2Q9DCW2 307 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 M1apQ9Z0E1 529 aa11.52□□□□□ -0.56
Herc4-201ENSMUST00000020258 Col4a5Q63ZW6 1691 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Supt3B0QZW4 406 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Slc4a5E9Q3M5 1116 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Vmn2r61L7N2B8 865 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Ap3d1O54774 1199 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Itga11P61622 1188 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Tp53i13Q5F267 385 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Serpina3gQ5I2A0 440 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Mapk10Q61831 464 aa11.52□□□□□ -0.57
Herc4-201ENSMUST00000020258 Nim1kQ8BHI9 436 aa11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms