RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Mtnd3P03899 115 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Nme2Q01768 152 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 AY358078Q6UY53 465 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Nucks1Q80XU3 234 aaKnown RBP17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Krt222Q8CCX5 294 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ttc23Q8CHY7 488 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Il17cQ8K4C5 194 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Slc26a5Q99NH7 744 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 ItpaQ9D892 198 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 ParvbQ9ES46 365 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 PnkpQ9JLV6 522 aaKnown RBP17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Map3k14Q9WUL6 942 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Vmn2r84D3YWE3 849 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Zbtb10E9Q8X5 861 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Nccrp1G3X9C2 266 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 E230025N22RikG5E8S3 482 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Nfatc2ipO09130 412 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 NoctO35710 429 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Kif2aP28740 705 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ckmt1P30275 418 aaKnown RBP17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Smpdl3bP58242 456 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 SgcgP82348 291 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Mmp7Q10738 264 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 CenplQ3U3S3 329 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ccdc34Q3UI66 367 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ddx3xQ62167 662 aaKnown RBP17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Q8BGK9 164 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gtf3c4Q8BMQ2 817 aaKnown RBP17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pabpc5Q8C7D3 381 aaKnown RBP17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Rnf222Q8CEF8 211 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Unc5bQ8K1S3 945 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Atpaf2Q91YY4 289 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cwc15Q9JHS9 229 aaKnown RBP17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 ReckQ9Z0J1 971 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pck1Q9Z2V4 622 aa17.06■□□□□ 0.32
Trim54-201ENSMUST00000013771 Wdr49A0A0N4SUK7 710 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Stpg3A2RSX4 306 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Armt1A6H630 439 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gp1baO35930 734 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cxcr3O88410 367 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gdf5P43027 495 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Il12bP43432 335 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 GckP52792 465 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cul4aQ3TCH7 759 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ntrk1Q3UFB7 799 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Trmt10cQ3UFY8 414 aaKnown RBP17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Lsmem1Q3UQS2 128 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pnliprp1Q5BKQ4 473 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 SpdyaQ5IBH7 310 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Clasp2Q8BRT1 1286 aaKnown RBP17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Sfrp1Q8C4U3 314 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Crispld1Q8CGD2 500 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 RhoqQ8R527 205 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Caap1Q8VDY9 356 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Olfr398Q8VFY0 314 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Lrrc26Q91W20 331 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pcdhgb4Q91XX6 912 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Mgrn1Q9D074 532 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 ToporslQ9D2F8 683 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Llcfc1Q9D9P8 108 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Prl8a6Q9DAY2 240 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Rnf32Q9JIT1 368 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Grm3Q9QYS2 879 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Nfu1Q9QZ23 255 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Adam24Q9R160 761 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 ArntlQ9WTL8 632 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pex11bQ9Z210 259 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Mzf1S4R1L6 814 aa17.05■□□□□ 0.32
Trim54-201ENSMUST00000013771 Zfp850J3QPC5 689 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Il13ra1O09030 424 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ifnb1P01575 182 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Timp2P25785 220 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Fpr1P33766 364 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 PnmtP40935 295 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ndst2P52850 883 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cdkl4Q3TZA2 342 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Fam35aQ3UEN2 891 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Q3UZV7 1028 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Atp1a2Q6PIE5 1020 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Olfr320Q7TRZ4 306 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Zswim6Q80TB7 1207 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Zmpste24Q80W54 475 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 H2-M10.5Q85ZW7 330 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Prox2Q8BII1 593 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Bpifb2Q8C1E1 462 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ulbp1Q8HWA3 334 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Hdac8Q8VH37 377 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cdhr1Q8VHP6 859 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Creld1Q91XD7 420 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Bcl7aQ9CXE2 210 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cfap57Q9D180 1249 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cdkn2aipnlQ9D211 116 aaKnown RBP17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Il1rl2Q9ERS7 574 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Tubd1Q9R1K7 455 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Zscan4eA0A1B0GRE8 505 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cylc2B1AWN8 422 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ptar1E9QAB6 424 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Akap1O08715 857 aaKnown RBP17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 Kif3cO35066 796 aa17.04■□□□□ 0.32
Trim54-201ENSMUST00000013771 CaluO35887 315 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms