RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Reep3Q99KK1 254 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pfdn1Q9CWM4 122 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cldn22Q9D7U6 220 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Copg1Q9QZE5 874 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ly6iQ9WU67 134 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 M1apQ9Z0E1 529 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm28363A0A087WQW2 129 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm6509A0A0J9YUV1 481 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 TprnA2AI08 749 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gbp4A4UUI3 631 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 SprtnG3X912 497 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm6351K9J7D1 481 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Hes2O54792 157 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 AprtP08030 180 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tas2r16P59529 299 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 WasP70315 520 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Smad5P97454 465 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pecam1Q08481 727 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Slc45a4Q0P5V9 785 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Dnajb14Q149L6 379 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Srbd1Q497V5 1015 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mief2Q5NCS9 454 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Kcnh1Q60603 989 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Fnip1Q68FD7 1165 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Abcg2Q7TMS5 657 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 DdnQ80TS7 710 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Eme1Q8BJW7 570 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rnh1Q91VI7 456 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 B4galt3Q91YY2 395 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Oas1cQ924S2 362 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Wdr12Q9JJA4 423 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Plod3Q9R0E1 741 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Oas1eA0A0J9YV76 386 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Klhl32A2AJX0 620 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ifi213D3Z5G0 586 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Icam1P13597 537 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 TankP70347 448 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Fcrl5Q68SN8 596 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mapk15Q80Y86 549 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 SvopQ8BFT9 548 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cdhr5Q8VHF2 831 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Agpat3Q9D517 376 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 IqccA2ADZ8 418 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Prrt4B2RU40 902 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm10722F6VLK5 217 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Hspa1bP17879 642 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 MafbP54841 323 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cyp2c37P56654 490 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 HpcaP84075 193 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 NogP97466 232 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 PamP97467 979 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 CtscP97821 462 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Larp7Q05CL8 570 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ppp1r26Q6A025 1163 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rpl10Q6ZWV3 214 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tgm6Q8BM11 706 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Slc18a2Q8BRU6 517 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gsto2Q8K2Q2 248 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Actr8Q8R2S9 624 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 NclnQ8VCM8 563 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 WwoxQ91WL8 414 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Trim12aQ99PQ1 284 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tbc1d15Q9CXF4 671 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Znf687Q9D2D7 1237 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Asap1Q9QWY8 1147 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gon4lQ9DB00 2260 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Svs4P18419 113 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rpl36P47964 105 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 SiaeP70665 541 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Trim40Q3UWA4 246 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Olfr464Q5SW48 313 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Stmnd1Q6P3A1 279 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Sephs1Q8BH69 392 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tyw1Q8BJM7 721 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 AA792892Q8C6S1 278 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 HnrnplQ8R081 586 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Stx19Q8R1Q0 292 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Olfr1494Q8VGP8 315 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 LiasQ99M04 373 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Htra1Q9R118 480 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Deaf1Q9Z1T5 566 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 P01740 135 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Chrm1P12657 460 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 IppP28575 584 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Vps26aP40336 327 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gp1bbP56400 206 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Tmem173Q3TBT3 378 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Zmat1Q3V0C1 714 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ccdc185Q3V118 621 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Kansl1lQ5DTI6 991 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Nfe2l2Q60795 597 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Msi1Q61474 362 aaKnown RBP12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rtl3Q6P1Y1 553 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mab21L3Q8CI17 429 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mkl1Q8K4J6 964 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 IlkapQ8R0F6 392 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 NeproQ8R2U2 564 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Olfr1352Q8VGX5 309 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Slc5a2Q923I7 670 aa12.81□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Trim39Q9ESN2 488 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms