RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Zfp566Q8VCI1 386 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 DdoQ922Z0 341 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Spag6Q9JLI7 507 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Aqp5Q9WTY4 265 aa16.54■□□□□ 0.24
Shh-201ENSMUST00000002708 Dennd4aE9Q8V6 1869 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Phf11A6H5X4 337 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 P01670 111 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 P01671 111 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 P01672 111 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 RxrgP28705 463 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Gdf7P43029 461 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Ldb1P70662 411 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Mc1rQ01727 315 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Trim75Q3UWZ0 467 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Elmo2Q8BHL5 732 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Sfrp1Q8C4U3 314 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 HscbQ8K3A0 234 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 GcshQ91WK5 170 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Serpina3nQ91WP6 418 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Lims2Q91XD2 341 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 RhojQ9ER71 214 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Akap5D3YVF0 745 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Rhox2gL7MUB9 191 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Atn1O35126 1175 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Psmc3O88685 442 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Mup5P11591 180 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Stat5aP42230 793 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 HpcaP84075 193 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Gm4981Q3ULJ8 291 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Dnajc1Q61712 552 aaKnown RBP16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr295Q7TS08 309 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Lrfn2Q80TG9 788 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Serpina3bQ8BYY9 420 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Wdr11Q8K1X1 1223 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Gfm2Q8R2Q4 779 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Sh3d19Q91X43 789 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Mccc1Q99MR8 717 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Ccdc97Q9DBT3 340 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Mgea5Q9EQQ9 916 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Il20Q9JKV9 176 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Trpc4Q9QUQ5 974 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Slfn2Q9Z0I6 378 aa16.53■□□□□ 0.24
Shh-201ENSMUST00000002708 Gbp6A0A0G2JDV3 611 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Olfr1049A2ARZ0 308 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Skint6A7XUZ6 1240 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Cyp2w1E9Q816 493 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Vmn2r5K7N788 911 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Kpna6O35345 536 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 CrymO54983 313 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 P01740 135 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Atxn1lP0C7T6 687 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 ArsaP50428 506 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 InhbcP55104 352 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Pla2g5P97391 137 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Sdr16c6Q05A13 316 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Cog7Q3UM29 770 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 DazlQ64368 298 aaKnown RBP16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Pcdhga7Q6DD96 935 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Cyp2d40Q6P8N9 338 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Dpp9Q8BVG4 862 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Traf3ip2Q8N7N6 555 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Tnfaip8l2Q9D8Y7 184 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Q9D9D9 101 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Rnft1Q9DCN7 395 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Msl3Q9WVG9 525 aa16.52■□□□□ 0.24
Shh-201ENSMUST00000002708 Vmn2r27D3YUK6 857 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Sema6aO35464 1031 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 BhmtO35490 407 aaKnown RBP16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 ZfrO88532 1074 aaKnown RBP16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Adra2bP30545 450 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc45a4Q0P5V9 785 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Ankrd13bQ5F259 626 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Alkbh8Q80Y20 664 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Nmur2Q8BZ39 395 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Ston2Q8BZ60 895 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 DeraQ91YP3 318 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Cdyl2Q9D5D8 503 aa16.52■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm6509A0A0J9YUV1 481 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc4a9E9PUP3 929 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Serpine3E9Q6A2 401 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm6351K9J7D1 481 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Stt3aP46978 705 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Csrp3P50462 194 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Kpna2P52293 529 aaKnown RBP16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 GaaP70699 953 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 OxtrP97926 388 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Tespa1Q3U132 458 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Ubtfl1Q3USZ2 394 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Akap14Q3V0I7 536 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Rslcan18Q7M6X5 460 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Kctd13Q8BGV7 329 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 DrgxQ8BYH0 263 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Ttc34Q8C0Q3 554 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Ppp4r1Q8K2V1 951 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Slc30a5Q8R4H9 761 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 PclafQ9CQX4 110 aaKnown RBP16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 CtsjQ9R014 334 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm14401A2ARV7 303 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm8369E9PZI3 166 aa16.51■□□□□ 0.23
Shh-201ENSMUST00000002708 Gm5145F8VQ88 278 aa16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms