RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C MSC7P38694 644 aa8.91□□□□□ -0.98
ATG17YLR423C TIM54P47045 478 aa8.91□□□□□ -0.98
ATG17YLR423C HDA2Q06629 674 aa8.91□□□□□ -0.98
ATG17YLR423C BDF2Q07442 638 aa8.91□□□□□ -0.98
ATG17YLR423C SPC42P36094 363 aa8.9□□□□□ -0.98
ATG17YLR423C SPF1P39986 1215 aaKnown RBP8.9□□□□□ -0.98
ATG17YLR423C PRK1P40494 810 aa8.9□□□□□ -0.98
ATG17YLR423C LSB6P42951 607 aa8.9□□□□□ -0.98
ATG17YLR423C RPN4Q03465 531 aa8.9□□□□□ -0.98
ATG17YLR423C TY1A-MR1Q04215 440 aa8.9□□□□□ -0.98
ATG17YLR423C SPO20Q04359 397 aa8.9□□□□□ -0.98
ATG17YLR423C CCP1P00431 361 aa8.89□□□□□ -0.99
ATG17YLR423C CEM1P39525 442 aa8.89□□□□□ -0.99
ATG17YLR423C NEO1P40527 1151 aa8.89□□□□□ -0.99
ATG17YLR423C DOS2P54858 310 aa8.89□□□□□ -0.99
ATG17YLR423C YDR444WQ04093 687 aa8.89□□□□□ -0.99
ATG17YLR423C CIT2P08679 460 aa8.88□□□□□ -0.99
ATG17YLR423C TFA2P36145 328 aa8.88□□□□□ -0.99
ATG17YLR423C ATG14P38270 344 aa8.88□□□□□ -0.99
ATG17YLR423C HUL5P53119 910 aa8.88□□□□□ -0.99
ATG17YLR423C EEB1Q02891 456 aa8.88□□□□□ -0.99
ATG17YLR423C TY1A-DR2Q03964 440 aaKnown RBP8.88□□□□□ -0.99
ATG17YLR423C SOG2Q08817 791 aa8.88□□□□□ -0.99
ATG17YLR423C DED1P06634 604 aaKnown RBP8.87□□□□□ -0.99
ATG17YLR423C YKL069WP36088 180 aa8.87□□□□□ -0.99
ATG17YLR423C PBP2P38151 413 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
ATG17YLR423C TYW3P53177 273 aa8.87□□□□□ -0.99
ATG17YLR423C YNR065CP53751 1116 aa8.87□□□□□ -0.99
ATG17YLR423C SIW14P53965 281 aa8.87□□□□□ -0.99
ATG17YLR423C LCB5Q06147 687 aaKnown RBP8.87□□□□□ -0.99
ATG17YLR423C YDR461C-AQ2V2P7 80 aa8.87□□□□□ -0.99
ATG17YLR423C MRP10O75012 95 aa8.86□□□□□ -0.99
ATG17YLR423C HTS1P07263 546 aaKnown RBP8.86□□□□□ -0.99
ATG17YLR423C VMA4P22203 233 aaKnown RBP8.86□□□□□ -0.99
ATG17YLR423C MTR4P47047 1073 aaKnown RBP8.86□□□□□ -0.99
ATG17YLR423C GUP1P53154 560 aa8.86□□□□□ -0.99
ATG17YLR423C SRC1Q03707 834 aa8.86□□□□□ -0.99
ATG17YLR423C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
ATG17YLR423C HVG1P0CE11 249 aa8.85□□□□□ -0.99
ATG17YLR423C MET22P32179 357 aa8.85□□□□□ -0.99
ATG17YLR423C AMN1P38285 549 aaPredicted RBP8.85□□□□□ -0.99
ATG17YLR423C EXO5P38289 585 aa8.85□□□□□ -0.99
ATG17YLR423C GNP1P48813 663 aa8.85□□□□□ -0.99
ATG17YLR423C TRP2P00899 507 aaKnown RBP8.84□□□□□ -0.99
ATG17YLR423C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
ATG17YLR423C LYP1P32487 611 aa8.84□□□□□ -0.99
ATG17YLR423C RRP14P36080 434 aaKnown RBP8.84□□□□□ -0.99
ATG17YLR423C ENT3P47160 408 aa8.84□□□□□ -0.99
ATG17YLR423C UTP22P53254 1237 aaPredicted RBP8.84□□□□□ -0.99
ATG17YLR423C SPO75Q07798 868 aa8.84□□□□□ -0.99
ATG17YLR423C RER2P35196 286 aa8.83□□□□□ -1
ATG17YLR423C TAT2P38967 592 aa8.83□□□□□ -1
ATG17YLR423C LEM3P42838 414 aa8.83□□□□□ -1
ATG17YLR423C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.83□□□□□ -1 RIP-Chip
ATG17YLR423C ROD1Q02805 837 aa8.83□□□□□ -1
ATG17YLR423C EST2Q06163 884 aa8.83□□□□□ -1
ATG17YLR423C OSH2Q12451 1283 aa8.83□□□□□ -1
ATG17YLR423C LYS5P50113 272 aa8.82□□□□□ -1
ATG17YLR423C SOK2P53438 785 aaPredicted RBP8.82□□□□□ -1
ATG17YLR423C ALG12P53730 551 aa8.82□□□□□ -1
ATG17YLR423C HAS1Q03532 505 aaKnown RBP8.82□□□□□ -1
ATG17YLR423C SYT1Q06836 1226 aa8.82□□□□□ -1
ATG17YLR423C REC8Q12188 680 aa8.82□□□□□ -1
ATG17YLR423C HEM13P11353 328 aaKnown RBP8.81□□□□□ -1
ATG17YLR423C ABD1P32783 436 aaPredicted RBP8.81□□□□□ -1
ATG17YLR423C RDH54P38086 958 aa8.81□□□□□ -1
ATG17YLR423C TY1A-LR4P0C2I8 440 aaKnown RBP8.8□□□□□ -1
ATG17YLR423C TY1A-DR6P0CX70 440 aa8.8□□□□□ -1
ATG17YLR423C TY1A-ER1P0CX71 440 aa8.8□□□□□ -1
ATG17YLR423C TY1A-LR2P0CX72 440 aa8.8□□□□□ -1
ATG17YLR423C TY1A-PLP0CX73 440 aa8.8□□□□□ -1
ATG17YLR423C TY1A-JR1P0CX74 440 aa8.8□□□□□ -1
ATG17YLR423C TY1A-LR3P0CX75 440 aa8.8□□□□□ -1
ATG17YLR423C TY1A-ML2P0CX76 440 aa8.8□□□□□ -1
ATG17YLR423C AGP1P25376 633 aa8.8□□□□□ -1
ATG17YLR423C YBR184WP38299 523 aa8.8□□□□□ -1
ATG17YLR423C YIR007WP40566 764 aa8.8□□□□□ -1
ATG17YLR423C BUD6P41697 788 aa8.8□□□□□ -1
ATG17YLR423C YIG1Q08956 461 aa8.8□□□□□ -1
ATG17YLR423C TY1A-GR1Q12085 440 aa8.8□□□□□ -1
ATG17YLR423C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.8□□□□□ -1
ATG17YLR423C TY1A-OLQ92392 440 aaKnown RBP8.8□□□□□ -1
ATG17YLR423C SBA1P28707 216 aaKnown RBP8.79□□□□□ -1
ATG17YLR423C MRP8P35719 219 aa8.79□□□□□ -1
ATG17YLR423C FPR3P38911 411 aaKnown RBP8.79□□□□□ -1
ATG17YLR423C HXT13P39924 564 aa8.79□□□□□ -1
ATG17YLR423C YGR125WP53273 1036 aa8.79□□□□□ -1
ATG17YLR423C HXT17P53631 564 aa8.79□□□□□ -1
ATG17YLR423C HXT15P54854 567 aa8.79□□□□□ -1
ATG17YLR423C IOC4Q04213 475 aa8.79□□□□□ -1
ATG17YLR423C YLR225CQ05948 407 aaKnown RBP8.79□□□□□ -1
ATG17YLR423C ADD66P36040 267 aa8.78□□□□□ -1
ATG17YLR423C SLS1P42900 643 aa8.78□□□□□ -1
ATG17YLR423C CAF120P53836 1060 aa8.78□□□□□ -1
ATG17YLR423C SPO71Q03868 1245 aa8.78□□□□□ -1
ATG17YLR423C FLC1Q08967 793 aa8.78□□□□□ -1
ATG17YLR423C MET6P05694 767 aaKnown RBP8.77□□□□□ -1.01
ATG17YLR423C INO1P11986 533 aa8.77□□□□□ -1.01
ATG17YLR423C SYP1P25623 870 aaKnown RBP8.77□□□□□ -1.01
ATG17YLR423C MKK2P32491 506 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms