RNA–Protein interactions for RNA: YIL072W

HOP1, Transcript of Meiosis-specific protein required for chromosome synapsis, yeast

Gene HOP1, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOP1	YIL072W	YJL181W	P46987	611 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	BUD9	P53226	547 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	NOG1	Q02892	647 aa	Known RBP	4.21	□□□□□ -1.74
HOP1	YIL072W	HAS1	Q03532	505 aa	Known RBP	4.21	□□□□□ -1.74
HOP1	YIL072W	HTS1	P07263	546 aa	Known RBP	4.21	□□□□□ -1.74
HOP1	YIL072W	TAF13	P11747	167 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	CYC8	P14922	966 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	SHU2	P38957	223 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	LSB6	P42951	607 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	YGR122W	P53272	402 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	SOK2	P53438	785 aa	Predicted RBP	4.21	□□□□□ -1.74
HOP1	YIL072W	RMD1	Q03441	430 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	OXR1	Q08952	273 aa		4.21	□□□□□ -1.74
HOP1	YIL072W	PRP40	P33203	583 aa	Known RBP	4.2	□□□□□ -1.74
HOP1	YIL072W	YMR187C	Q03236	431 aa		4.2	□□□□□ -1.74
HOP1	YIL072W	YOL098C	Q12496	1037 aa		4.2	□□□□□ -1.74
HOP1	YIL072W	PGM1	P33401	570 aa	Known RBP	4.19	□□□□□ -1.74
HOP1	YIL072W	MDJ1	P35191	511 aa		4.19	□□□□□ -1.74
HOP1	YIL072W	TED1	P40533	473 aa		4.19	□□□□□ -1.74
HOP1	YIL072W	IOC3	P43596	787 aa		4.19	□□□□□ -1.74
HOP1	YIL072W	ARI1	P53111	347 aa	Known RBP	4.19	□□□□□ -1.74
HOP1	YIL072W	FAR11	P53917	953 aa		4.19	□□□□□ -1.74
HOP1	YIL072W	YLL054C	Q12244	843 aa		4.19	□□□□□ -1.74
HOP1	YIL072W	TY1A-NL1	Q12391	440 aa	Known RBP	4.19	□□□□□ -1.74
HOP1	YIL072W	YCK2	P23292	546 aa	Known RBP	4.18	□□□□□ -1.74
HOP1	YIL072W	SPC42	P36094	363 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	RRM3	P38766	723 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	YPL109C	Q02981	657 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	FPR4	Q06205	392 aa	Predicted RBP	4.18	□□□□□ -1.74
HOP1	YIL072W	ELG1	Q12050	791 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	RAD2	P07276	1031 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	HEM13	P11353	328 aa	Known RBP	4.18	□□□□□ -1.74
HOP1	YIL072W	MAE1	P36013	669 aa	Known RBP	4.18	□□□□□ -1.74
HOP1	YIL072W	PIC2	P40035	300 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	ENT3	P47160	408 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	MEC3	Q02574	474 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	DAL4	Q04895	635 aa		4.18	□□□□□ -1.74
HOP1	YIL072W	SSF2	Q12153	453 aa	Predicted RBP	4.18	□□□□□ -1.74
HOP1	YIL072W	MCM5	P29496	775 aa	Known RBP	4.17	□□□□□ -1.74
HOP1	YIL072W	PEP7	P32609	515 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	BRN1	P38170	754 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	NEO1	P40527	1151 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	MAD1	P40957	749 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	CCT8	P47079	568 aa	Known RBP	4.17	□□□□□ -1.74
HOP1	YIL072W	MON1	P53129	644 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	UTP22	P53254	1237 aa	Predicted RBP	4.17	□□□□□ -1.74
HOP1	YIL072W	DOS2	P54858	310 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	ADI1	Q03677	179 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	MTC5	Q03897	1148 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	ESF1	Q06344	628 aa	Known RBP	4.17	□□□□□ -1.74
HOP1	YIL072W	MCD1	Q12158	566 aa		4.17	□□□□□ -1.74
HOP1	YIL072W	RSC6	P25632	483 aa		4.16	□□□□□ -1.74
HOP1	YIL072W	EXO5	P38289	585 aa		4.16	□□□□□ -1.74
HOP1	YIL072W	ULP1	Q02724	621 aa		4.16	□□□□□ -1.74
HOP1	YIL072W	SEC23	P15303	768 aa	Known RBP	4.16	□□□□□ -1.74
HOP1	YIL072W	VMA4	P22203	233 aa	Known RBP	4.16	□□□□□ -1.74
HOP1	YIL072W	TAT2	P38967	592 aa		4.16	□□□□□ -1.74
HOP1	YIL072W	NCE103	P53615	221 aa		4.16	□□□□□ -1.74
HOP1	YIL072W	YOR223W	Q12015	292 aa		4.16	□□□□□ -1.74
HOP1	YIL072W	RDH54	P38086	958 aa		4.15	□□□□□ -1.75
HOP1	YIL072W	RNH70	P53331	553 aa		4.15	□□□□□ -1.75
HOP1	YIL072W	CIT2	P08679	460 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	CLN2	P20438	545 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	PET112	P33893	541 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	MNR2	P35724	969 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	TAT1	P38085	619 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	NMD2	P38798	1089 aa	Known RBP	4.14	□□□□□ -1.75
HOP1	YIL072W	RKM2	Q03942	479 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	REC8	Q12188	680 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	PRE9	P23638	258 aa	Known RBP	4.14	□□□□□ -1.75
HOP1	YIL072W	DUT1	P33317	147 aa		4.14	□□□□□ -1.75
HOP1	YIL072W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-DR6	P0CX70	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-ER1	P0CX71	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-LR2	P0CX72	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-PL	P0CX73	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-JR1	P0CX74	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-LR3	P0CX75	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-ML2	P0CX76	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	ERS1	P17261	260 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	YKL077W	P36081	392 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	SLN1	P39928	1220 aa	Predicted RBP	4.13	□□□□□ -1.75
HOP1	YIL072W	PRY1	P47032	299 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	NSE3	Q05541	303 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-GR1	Q12085	440 aa		4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.13	□□□□□ -1.75
HOP1	YIL072W	TY1A-OL	Q92392	440 aa	Known RBP	4.13	□□□□□ -1.75
HOP1	YIL072W	MSH3	P25336	1018 aa		4.12	□□□□□ -1.75
HOP1	YIL072W	SRP40	P32583	406 aa	Predicted RBP	4.12	□□□□□ -1.75
HOP1	YIL072W	BUD6	P41697	788 aa		4.12	□□□□□ -1.75
HOP1	YIL072W	GNP1	P48813	663 aa		4.12	□□□□□ -1.75
HOP1	YIL072W	YPL034W	Q03083	165 aa		4.12	□□□□□ -1.75
HOP1	YIL072W	SAF1	P38352	637 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	NEM1	P38757	446 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	MRPS18	P42847	217 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	MTR4	P47047	1073 aa	Known RBP	4.11	□□□□□ -1.75
HOP1	YIL072W	FAA4	P47912	694 aa	Known RBP	4.11	□□□□□ -1.75
HOP1	YIL072W	RPN4	Q03465	531 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	WRS1	Q12109	432 aa	Known RBP	4.11	□□□□□ -1.75
HOP1	YIL072W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms