RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LTN1O94822 1766 aa20.97■□□□□ 0.95
PHGDH-231ENST00000641939 USP35Q9P2H5 1018 aa20.95■□□□□ 0.94
PHGDH-231ENST00000641939 OVOS2A0A0J9YW53 1432 aa20.95■□□□□ 0.94
PHGDH-231ENST00000641939 OVOS2Q6IE36 1432 aa20.95■□□□□ 0.94
PHGDH-231ENST00000641939 ABCC6O95255 1503 aa20.94■□□□□ 0.94
PHGDH-231ENST00000641939 AXIN2Q9Y2T1 843 aa20.94■□□□□ 0.94
PHGDH-231ENST00000641939 HSPA5P11021 654 aaKnown RBP20.93■□□□□ 0.94
PHGDH-231ENST00000641939 TCP11L2Q8N4U5 519 aa20.93■□□□□ 0.94
PHGDH-231ENST00000641939 CRB1P82279 1406 aa20.93■□□□□ 0.94
PHGDH-231ENST00000641939 BARGINQ6ZT62 677 aa20.92■□□□□ 0.94
PHGDH-231ENST00000641939 CCDC125Q86Z20 511 aa20.92■□□□□ 0.94
PHGDH-231ENST00000641939 THRAP3Q9Y2W1 955 aaKnown RBP20.92■□□□□ 0.94
PHGDH-231ENST00000641939 KIF20BQ96Q89 1820 aa20.91■□□□□ 0.94
PHGDH-231ENST00000641939 COG3Q96JB2 828 aa20.9■□□□□ 0.94
PHGDH-231ENST00000641939 WDR17Q8IZU2 1322 aa20.89■□□□□ 0.93
PHGDH-231ENST00000641939 TOM1L2Q6ZVM7 507 aa20.89■□□□□ 0.93
PHGDH-231ENST00000641939 BLMP54132 1417 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-231ENST00000641939 PARP4Q9UKK3 1724 aaKnown RBP20.88■□□□□ 0.93
PHGDH-231ENST00000641939 WNK3Q9BYP7 1800 aa20.88■□□□□ 0.93
PHGDH-231ENST00000641939 FYB1O15117 783 aa20.86■□□□□ 0.93
PHGDH-231ENST00000641939 CSB-PGBD3P0DP91 1061 aa20.86■□□□□ 0.93
PHGDH-231ENST00000641939 POLR3GLQ9BT43 218 aa20.86■□□□□ 0.93
PHGDH-231ENST00000641939 CARD14Q9BXL6 1004 aa20.85■□□□□ 0.93
PHGDH-231ENST00000641939 GGNBP2Q9H3C7 697 aa20.84■□□□□ 0.93
PHGDH-231ENST00000641939 NSD3Q9BZ95 1437 aa20.84■□□□□ 0.93
PHGDH-231ENST00000641939 PDE3BQ13370 1112 aa20.83■□□□□ 0.93
PHGDH-231ENST00000641939 SF3B2Q13435 895 aaKnown RBP20.83■□□□□ 0.93
PHGDH-231ENST00000641939 FAM182BQ5T319 152 aa20.83■□□□□ 0.93
PHGDH-231ENST00000641939 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.93
PHGDH-231ENST00000641939 RGPD1P0DJD0 1748 aa20.83■□□□□ 0.92
PHGDH-231ENST00000641939 ERBB3P21860 1342 aa20.82■□□□□ 0.92
PHGDH-231ENST00000641939 LRRC37A3O60309 1634 aa20.81■□□□□ 0.92
PHGDH-231ENST00000641939 FAM196AQ6ZSG2 479 aa20.8■□□□□ 0.92
PHGDH-231ENST00000641939 IP6K1Q92551 441 aa20.8■□□□□ 0.92
PHGDH-231ENST00000641939 CCDC7Q96M83 1385 aa20.8■□□□□ 0.92
PHGDH-231ENST00000641939 MAP3K19Q56UN5 1328 aa20.79■□□□□ 0.92
PHGDH-231ENST00000641939 FBLN1P23142 703 aa20.79■□□□□ 0.92
PHGDH-231ENST00000641939 ANKRD24Q8TF21 1146 aa20.79■□□□□ 0.92
PHGDH-231ENST00000641939 CDCA7Q9BWT1 371 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-231ENST00000641939 FAM208AQ9UK61 1670 aaKnown RBP20.79■□□□□ 0.92
PHGDH-231ENST00000641939 C11orf95C9JLR9 678 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-231ENST00000641939 AMPHP49418 695 aa20.77■□□□□ 0.92
PHGDH-231ENST00000641939 DDB1Q16531 1140 aa20.77■□□□□ 0.92
PHGDH-231ENST00000641939 NLRP2Q9NX02 1062 aa20.77■□□□□ 0.92
PHGDH-231ENST00000641939 TNS1Q9HBL0 1735 aaKnown RBP20.77■□□□□ 0.92
PHGDH-231ENST00000641939 DISP2A7MBM2 1401 aa20.77■□□□□ 0.91
PHGDH-231ENST00000641939 CGNL1Q0VF96 1302 aa20.77■□□□□ 0.91
PHGDH-231ENST00000641939 RRS1Q15050 365 aaKnown RBP20.76■□□□□ 0.91
PHGDH-231ENST00000641939 DEFB132Q7Z7B7 95 aa20.76■□□□□ 0.91
PHGDH-231ENST00000641939 RTL1A6NKG5 1358 aa20.75■□□□□ 0.91
PHGDH-231ENST00000641939 HOXC9P31274 260 aa20.75■□□□□ 0.91
PHGDH-231ENST00000641939 ANKRD26Q9UPS8 1709 aa20.75■□□□□ 0.91
PHGDH-231ENST00000641939 BAG6P46379 1132 aa20.74■□□□□ 0.91
PHGDH-231ENST00000641939 PEAK1Q9H792 1746 aa20.74■□□□□ 0.91
PHGDH-231ENST00000641939 RGPD2P0DJD1 1756 aa20.73■□□□□ 0.91
PHGDH-231ENST00000641939 LTV1Q96GA3 475 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-231ENST00000641939 PANK3Q9H999 370 aa20.73■□□□□ 0.91
PHGDH-231ENST00000641939 MAP2P11137 1827 aaKnown RBP20.73■□□□□ 0.91
PHGDH-231ENST00000641939 SBF2Q86WG5 1849 aa20.73■□□□□ 0.91
PHGDH-231ENST00000641939 OVOS2A0A0G2JMS6 1433 aa20.72■□□□□ 0.91
PHGDH-231ENST00000641939 TRIM37O94972 964 aa20.72■□□□□ 0.91
PHGDH-231ENST00000641939 EXOC5O00471 708 aa20.71■□□□□ 0.91
PHGDH-231ENST00000641939 KIF7Q2M1P5 1343 aa20.7■□□□□ 0.9
PHGDH-231ENST00000641939 KIF24Q5T7B8 1368 aa20.7■□□□□ 0.9
PHGDH-231ENST00000641939 IL2RBP14784 551 aa20.69■□□□□ 0.9
PHGDH-231ENST00000641939 MARCH10Q8NA82 808 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-231ENST00000641939 TNS2Q63HR2 1409 aa20.69■□□□□ 0.9
PHGDH-231ENST00000641939 FLT4P35916 1363 aa20.68■□□□□ 0.9
PHGDH-231ENST00000641939 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
PHGDH-231ENST00000641939 EN1Q05925 392 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-231ENST00000641939 INSRP06213 1382 aa20.67■□□□□ 0.9
PHGDH-231ENST00000641939 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
PHGDH-231ENST00000641939 EMILIN1Q9Y6C2 1016 aa20.66■□□□□ 0.9
PHGDH-231ENST00000641939 BCL9O00512 1426 aa20.65■□□□□ 0.9
PHGDH-231ENST00000641939 NSD2O96028 1365 aa20.65■□□□□ 0.9
PHGDH-231ENST00000641939 APBA3O96018 575 aa20.65■□□□□ 0.9
PHGDH-231ENST00000641939 HSP90AB2PQ58FF8 381 aa20.65■□□□□ 0.9
PHGDH-231ENST00000641939 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.89
PHGDH-231ENST00000641939 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-231ENST00000641939 CAMKK2Q96RR4 588 aa20.62■□□□□ 0.89
PHGDH-231ENST00000641939 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
PHGDH-231ENST00000641939 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-231ENST00000641939 EZH2Q15910 746 aaKnown RBP20.61■□□□□ 0.89
PHGDH-231ENST00000641939 NBPF6Q5VWK0 638 aa20.61■□□□□ 0.89
PHGDH-231ENST00000641939 NBPF4Q96M43 638 aa20.61■□□□□ 0.89
PHGDH-231ENST00000641939 POLKQ9UBT6 870 aa20.61■□□□□ 0.89
PHGDH-231ENST00000641939 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-231ENST00000641939 RREB1Q92766 1687 aa20.6■□□□□ 0.89
PHGDH-231ENST00000641939 RGPD3A6NKT7 1758 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-231ENST00000641939 RGPD4Q7Z3J3 1758 aa20.59■□□□□ 0.89
PHGDH-231ENST00000641939 WASHC2AQ641Q2 1341 aa20.59■□□□□ 0.89
PHGDH-231ENST00000641939 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
PHGDH-231ENST00000641939 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.88
PHGDH-231ENST00000641939 MEGF6O75095 1541 aa20.58■□□□□ 0.88
PHGDH-231ENST00000641939 NHSQ6T4R5 1651 aa20.58■□□□□ 0.88
PHGDH-231ENST00000641939 MORC1Q86VD1 984 aa20.57■□□□□ 0.88
PHGDH-231ENST00000641939 SRCAPQ6ZRS2 3230 aa20.56■□□□□ 0.88
PHGDH-231ENST00000641939 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
PHGDH-231ENST00000641939 NUP188Q5SRE5 1749 aa20.56■□□□□ 0.88
PHGDH-231ENST00000641939 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms