RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 A0A0G2JS52 829 aa24.03■■□□□ 1.44
PHGDH-227ENST00000641811 MYT1Q01538 1121 aa24.03■■□□□ 1.44
PHGDH-227ENST00000641811 UPF1Q92900 1129 aaKnown RBP eCLIP24.03■■□□□ 1.44
PHGDH-227ENST00000641811 FYB1O15117 783 aa24.02■■□□□ 1.44
PHGDH-227ENST00000641811 COG3Q96JB2 828 aa24.02■■□□□ 1.44
PHGDH-227ENST00000641811 GGNBP2Q9H3C7 697 aa24.02■■□□□ 1.44
PHGDH-227ENST00000641811 FBLN1P23142 703 aa24■■□□□ 1.43
PHGDH-227ENST00000641811 BRWD3Q6RI45 1802 aa24■■□□□ 1.43
PHGDH-227ENST00000641811 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
PHGDH-227ENST00000641811 RGPD5Q99666 1765 aa23.98■■□□□ 1.43
PHGDH-227ENST00000641811 CRB1P82279 1406 aa23.95■■□□□ 1.42
PHGDH-227ENST00000641811 TOM1L2Q6ZVM7 507 aa23.95■■□□□ 1.42
PHGDH-227ENST00000641811 KRT27Q7Z3Y8 459 aa23.95■■□□□ 1.42
PHGDH-227ENST00000641811 TCP11L2Q8N4U5 519 aa23.95■■□□□ 1.42
PHGDH-227ENST00000641811 LTN1O94822 1766 aa23.95■■□□□ 1.42
PHGDH-227ENST00000641811 WDR17Q8IZU2 1322 aa23.94■■□□□ 1.42
PHGDH-227ENST00000641811 THSD7AQ9UPZ6 1657 aa23.94■■□□□ 1.42
PHGDH-227ENST00000641811 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
PHGDH-227ENST00000641811 CSB-PGBD3P0DP91 1061 aa23.93■■□□□ 1.42
PHGDH-227ENST00000641811 BARGINQ6ZT62 677 aa23.93■■□□□ 1.42
PHGDH-227ENST00000641811 PANK3Q9H999 370 aa23.93■■□□□ 1.42
PHGDH-227ENST00000641811 KIF20BQ96Q89 1820 aa23.93■■□□□ 1.42
PHGDH-227ENST00000641811 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
PHGDH-227ENST00000641811 ABCC6O95255 1503 aa23.91■■□□□ 1.42
PHGDH-227ENST00000641811 FAM182BQ5T319 152 aa23.91■■□□□ 1.42
PHGDH-227ENST00000641811 RRS1Q15050 365 aaKnown RBP23.9■■□□□ 1.42
PHGDH-227ENST00000641811 THRAP3Q9Y2W1 955 aaKnown RBP23.9■■□□□ 1.42
PHGDH-227ENST00000641811 EP400Q96L91 3159 aa23.89■■□□□ 1.42
PHGDH-227ENST00000641811 IP6K1Q92551 441 aa23.89■■□□□ 1.41
PHGDH-227ENST00000641811 CGNL1Q0VF96 1302 aa23.88■■□□□ 1.41
PHGDH-227ENST00000641811 ANKRD24Q8TF21 1146 aa23.88■■□□□ 1.41
PHGDH-227ENST00000641811 ERBB3P21860 1342 aa23.87■■□□□ 1.41
PHGDH-227ENST00000641811 AMPHP49418 695 aa23.87■■□□□ 1.41
PHGDH-227ENST00000641811 CARD10Q9BWT7 1032 aa23.87■■□□□ 1.41
PHGDH-227ENST00000641811 HOXC9P31274 260 aa23.86■■□□□ 1.41
PHGDH-227ENST00000641811 LTV1Q96GA3 475 aaPredicted RBP23.86■■□□□ 1.41
PHGDH-227ENST00000641811 NLRP2Q9NX02 1062 aa23.85■■□□□ 1.41
PHGDH-227ENST00000641811 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
PHGDH-227ENST00000641811 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
PHGDH-227ENST00000641811 WASHC2AQ641Q2 1341 aa23.82■■□□□ 1.4
PHGDH-227ENST00000641811 CCDC7Q96M83 1385 aa23.81■■□□□ 1.4
PHGDH-227ENST00000641811 PARP4Q9UKK3 1724 aaKnown RBP23.8■■□□□ 1.4
PHGDH-227ENST00000641811 EMILIN1Q9Y6C2 1016 aa23.8■■□□□ 1.4
PHGDH-227ENST00000641811 RTL1A6NKG5 1358 aa23.79■■□□□ 1.4
PHGDH-227ENST00000641811 TNNT2P45379 298 aaPredicted RBP23.79■■□□□ 1.4
PHGDH-227ENST00000641811 CCDC125Q86Z20 511 aa23.79■■□□□ 1.4
PHGDH-227ENST00000641811 PEAK1Q9H792 1746 aa23.79■■□□□ 1.4
PHGDH-227ENST00000641811 DISP2A7MBM2 1401 aa23.78■■□□□ 1.4
PHGDH-227ENST00000641811 KNSTRNQ9Y448 316 aa23.78■■□□□ 1.4
PHGDH-227ENST00000641811 WNK3Q9BYP7 1800 aa23.77■■□□□ 1.4
PHGDH-227ENST00000641811 DDB1Q16531 1140 aa23.77■■□□□ 1.4
PHGDH-227ENST00000641811 HSP90AB2PQ58FF8 381 aa23.77■■□□□ 1.4
PHGDH-227ENST00000641811 LRRC37A3O60309 1634 aa23.77■■□□□ 1.4
PHGDH-227ENST00000641811 PPM1GO15355 546 aaPredicted RBP23.76■■□□□ 1.39
PHGDH-227ENST00000641811 CDCA7Q9BWT1 371 aaPredicted RBP23.76■■□□□ 1.39
PHGDH-227ENST00000641811 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
PHGDH-227ENST00000641811 FAM196AQ6ZSG2 479 aa23.75■■□□□ 1.39
PHGDH-227ENST00000641811 FLT4P35916 1363 aa23.75■■□□□ 1.39
PHGDH-227ENST00000641811 DEFB132Q7Z7B7 95 aa23.74■■□□□ 1.39
PHGDH-227ENST00000641811 SF3B2Q13435 895 aaKnown RBP23.73■■□□□ 1.39
PHGDH-227ENST00000641811 POLKQ9UBT6 870 aa23.73■■□□□ 1.39
PHGDH-227ENST00000641811 INSRP06213 1382 aa23.73■■□□□ 1.39
PHGDH-227ENST00000641811 PER1O15534 1290 aaPredicted RBP23.72■■□□□ 1.39
PHGDH-227ENST00000641811 IL2RBP14784 551 aa23.72■■□□□ 1.39
PHGDH-227ENST00000641811 AMER1Q5JTC6 1135 aaPredicted RBP23.72■■□□□ 1.39
PHGDH-227ENST00000641811 MORC1Q86VD1 984 aa23.72■■□□□ 1.39
PHGDH-227ENST00000641811 MARCH10Q8NA82 808 aaPredicted RBP23.72■■□□□ 1.39
PHGDH-227ENST00000641811 NSD2O96028 1365 aa23.72■■□□□ 1.39
PHGDH-227ENST00000641811 RGPD2P0DJD1 1756 aa23.72■■□□□ 1.39
PHGDH-227ENST00000641811 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
PHGDH-227ENST00000641811 EXOC5O00471 708 aa23.71■■□□□ 1.39
PHGDH-227ENST00000641811 TRIM37O94972 964 aa23.71■■□□□ 1.39
PHGDH-227ENST00000641811 NBPF6Q5VWK0 638 aa23.71■■□□□ 1.39
PHGDH-227ENST00000641811 NBPF4Q96M43 638 aa23.71■■□□□ 1.39
PHGDH-227ENST00000641811 MAP2P11137 1827 aaKnown RBP23.7■■□□□ 1.39
PHGDH-227ENST00000641811 FAM208AQ9UK61 1670 aaKnown RBP23.7■■□□□ 1.39
PHGDH-227ENST00000641811 USHBP1Q8N6Y0 703 aa23.7■■□□□ 1.38
PHGDH-227ENST00000641811 SMG6Q86US8 1419 aaKnown RBP23.68■■□□□ 1.38
PHGDH-227ENST00000641811 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
PHGDH-227ENST00000641811 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
PHGDH-227ENST00000641811 RGPD1P0DJD0 1748 aa23.66■■□□□ 1.38
PHGDH-227ENST00000641811 CNGB1Q14028 1251 aaPredicted RBP23.65■■□□□ 1.38
PHGDH-227ENST00000641811 CC2D1BQ5T0F9 858 aaKnown RBP23.65■■□□□ 1.38
PHGDH-227ENST00000641811 TNS1Q9HBL0 1735 aaKnown RBP23.64■■□□□ 1.38
PHGDH-227ENST00000641811 BAG6P46379 1132 aa23.64■■□□□ 1.37
PHGDH-227ENST00000641811 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-227ENST00000641811 MEGF6O75095 1541 aa23.63■■□□□ 1.37
PHGDH-227ENST00000641811 APBA3O96018 575 aa23.62■■□□□ 1.37
PHGDH-227ENST00000641811 PTF1AQ7RTS3 328 aa23.62■■□□□ 1.37
PHGDH-227ENST00000641811 EIF4A2Q14240 407 aaKnown RBP23.6■■□□□ 1.37
PHGDH-227ENST00000641811 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
PHGDH-227ENST00000641811 EYA1Q99502 592 aa23.59■■□□□ 1.37
PHGDH-227ENST00000641811 RAPGEF4Q8WZA2 1011 aa23.58■■□□□ 1.37
PHGDH-227ENST00000641811 SBF2Q86WG5 1849 aa23.58■■□□□ 1.37
PHGDH-227ENST00000641811 BCL9O00512 1426 aa23.58■■□□□ 1.36
PHGDH-227ENST00000641811 EZH2Q15910 746 aaKnown RBP23.57■■□□□ 1.36
PHGDH-227ENST00000641811 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
PHGDH-227ENST00000641811 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
PHGDH-227ENST00000641811 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
PHGDH-227ENST00000641811 CAMKK2Q96RR4 588 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms