RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 NLRP13Q86W25 1043 aa14.35□□□□□ -0.11
PHGDH-212ENST00000641247 LRRC37A3O60309 1634 aa14.33□□□□□ -0.11
PHGDH-212ENST00000641247 BCL9O00512 1426 aa14.33□□□□□ -0.11
PHGDH-212ENST00000641247 GIGYF1O75420 1035 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-212ENST00000641247 AATKQ6ZMQ8 1374 aa14.33□□□□□ -0.12
PHGDH-212ENST00000641247 RGPD3A6NKT7 1758 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-212ENST00000641247 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
PHGDH-212ENST00000641247 GPR162Q16538 588 aa14.32□□□□□ -0.12
PHGDH-212ENST00000641247 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
PHGDH-212ENST00000641247 SBF2Q86WG5 1849 aa14.31□□□□□ -0.12
PHGDH-212ENST00000641247 NLRP6P59044 892 aa14.3□□□□□ -0.12
PHGDH-212ENST00000641247 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
PHGDH-212ENST00000641247 WDR17Q8IZU2 1322 aa14.3□□□□□ -0.12
PHGDH-212ENST00000641247 MAP3K5Q99683 1374 aa14.3□□□□□ -0.12
PHGDH-212ENST00000641247 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
PHGDH-212ENST00000641247 LRRC4BQ9NT99 713 aa14.29□□□□□ -0.12
PHGDH-212ENST00000641247 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
PHGDH-212ENST00000641247 NLGN2Q8NFZ4 835 aa14.28□□□□□ -0.12
PHGDH-212ENST00000641247 EXOC5O00471 708 aa14.27□□□□□ -0.13
PHGDH-212ENST00000641247 ARHGEF25Q86VW2 580 aa14.27□□□□□ -0.13
PHGDH-212ENST00000641247 CARD10Q9BWT7 1032 aa14.27□□□□□ -0.13
PHGDH-212ENST00000641247 CABP1Q9NZU7 370 aa14.27□□□□□ -0.13
PHGDH-212ENST00000641247 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.13
PHGDH-212ENST00000641247 PPIP5K1Q6PFW1 1433 aa14.26□□□□□ -0.13
PHGDH-212ENST00000641247 NBPF1Q3BBV0 1214 aa14.26□□□□□ -0.13
PHGDH-212ENST00000641247 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
PHGDH-212ENST00000641247 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
PHGDH-212ENST00000641247 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-212ENST00000641247 ITSN1Q15811 1721 aa14.26□□□□□ -0.13
PHGDH-212ENST00000641247 SLIT3O75094 1523 aa14.25□□□□□ -0.13
PHGDH-212ENST00000641247 COL18A1P39060 1754 aa14.25□□□□□ -0.13
PHGDH-212ENST00000641247 YBX3P16989 372 aaKnown RBP eCLIP14.25□□□□□ -0.132e-7■□□□□ 10.4
PHGDH-212ENST00000641247 SRPK2P78362 688 aaKnown RBP14.25□□□□□ -0.13
PHGDH-212ENST00000641247 SHANK3Q9BYB0 1731 aa14.24□□□□□ -0.13
PHGDH-212ENST00000641247 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
PHGDH-212ENST00000641247 SOX12O15370 315 aa14.23□□□□□ -0.13
PHGDH-212ENST00000641247 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
PHGDH-212ENST00000641247 CHD4Q14839 1912 aa14.23□□□□□ -0.13
PHGDH-212ENST00000641247 USP6P35125 1406 aa14.23□□□□□ -0.13
PHGDH-212ENST00000641247 PAPPAQ13219 1627 aa14.23□□□□□ -0.13
PHGDH-212ENST00000641247 KCNQ4P56696 695 aa14.22□□□□□ -0.13
PHGDH-212ENST00000641247 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
PHGDH-212ENST00000641247 STAC3Q96MF2 364 aa14.21□□□□□ -0.13
PHGDH-212ENST00000641247 CPSF1Q10570 1443 aaKnown RBP14.21□□□□□ -0.13
PHGDH-212ENST00000641247 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-212ENST00000641247 RAB3GAP2Q9H2M9 1393 aa14.19□□□□□ -0.14
PHGDH-212ENST00000641247 TTC21BQ7Z4L5 1316 aa14.18□□□□□ -0.14
PHGDH-212ENST00000641247 CEP350Q5VT06 3117 aa14.18□□□□□ -0.14
PHGDH-212ENST00000641247 TNS2Q63HR2 1409 aa14.18□□□□□ -0.14
PHGDH-212ENST00000641247 SLC16A10Q8TF71 515 aa14.18□□□□□ -0.14
PHGDH-212ENST00000641247 ATP10DQ9P241 1426 aa14.17□□□□□ -0.14
PHGDH-212ENST00000641247 POLD1P28340 1107 aa14.17□□□□□ -0.14
PHGDH-212ENST00000641247 CCDC7Q96M83 1385 aa14.17□□□□□ -0.14
PHGDH-212ENST00000641247 WNK3Q9BYP7 1800 aa14.17□□□□□ -0.14
PHGDH-212ENST00000641247 HSPA6P17066 643 aa14.16□□□□□ -0.14
PHGDH-212ENST00000641247 PIK3C2AO00443 1686 aa14.16□□□□□ -0.14
PHGDH-212ENST00000641247 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-212ENST00000641247 NHSQ6T4R5 1651 aa14.15□□□□□ -0.14
PHGDH-212ENST00000641247 KCNH5Q8NCM2 988 aa14.15□□□□□ -0.14
PHGDH-212ENST00000641247 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
PHGDH-212ENST00000641247 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
PHGDH-212ENST00000641247 TRPM1Q7Z4N2 1603 aa14.13□□□□□ -0.15
PHGDH-212ENST00000641247 IL2RBP14784 551 aa14.13□□□□□ -0.15
PHGDH-212ENST00000641247 COL23A1Q86Y22 540 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-212ENST00000641247 ZNF526Q8TF50 670 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-212ENST00000641247 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
PHGDH-212ENST00000641247 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
PHGDH-212ENST00000641247 ERBB3P21860 1342 aa14.13□□□□□ -0.15
PHGDH-212ENST00000641247 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
PHGDH-212ENST00000641247 RGPD5Q99666 1765 aa14.12□□□□□ -0.15
PHGDH-212ENST00000641247 GPBP1L1Q9HC44 474 aaPredicted RBP14.12□□□□□ -0.15
PHGDH-212ENST00000641247 NFAT5O94916 1531 aa14.11□□□□□ -0.15
PHGDH-212ENST00000641247 SLC27A3Q5K4L6 730 aa14.11□□□□□ -0.15
PHGDH-212ENST00000641247 ABCC6O95255 1503 aa14.1□□□□□ -0.15
PHGDH-212ENST00000641247 COL24A1Q17RW2 1714 aa14.1□□□□□ -0.15
PHGDH-212ENST00000641247 MSL1Q68DK7 614 aa14.1□□□□□ -0.15
PHGDH-212ENST00000641247 DDX54Q8TDD1 881 aaKnown RBP14.1□□□□□ -0.15
PHGDH-212ENST00000641247 ADCY9O60503 1353 aa14.09□□□□□ -0.15
PHGDH-212ENST00000641247 BTAF1O14981 1849 aa14.09□□□□□ -0.15
PHGDH-212ENST00000641247 PRIM1P49642 420 aaKnown RBP14.09□□□□□ -0.15
PHGDH-212ENST00000641247 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-212ENST00000641247 KIF3CO14782 793 aa14.08□□□□□ -0.16
PHGDH-212ENST00000641247 DNAJC5GQ8N7S2 189 aa14.08□□□□□ -0.16
PHGDH-212ENST00000641247 ANKRD24Q8TF21 1146 aa14.08□□□□□ -0.16
PHGDH-212ENST00000641247 NSD2O96028 1365 aa14.08□□□□□ -0.16
PHGDH-212ENST00000641247 WWC3Q9ULE0 1092 aa14.07□□□□□ -0.16
PHGDH-212ENST00000641247 TTC21AQ8NDW8 1320 aa14.07□□□□□ -0.16
PHGDH-212ENST00000641247 MSH5O43196 834 aa14.06□□□□□ -0.16
PHGDH-212ENST00000641247 NME9Q86XW9 330 aa14.06□□□□□ -0.16
PHGDH-212ENST00000641247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
PHGDH-212ENST00000641247 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-212ENST00000641247 AMIGO3Q86WK7 504 aa14.04□□□□□ -0.16
PHGDH-212ENST00000641247 CD2APQ9Y5K6 639 aa14.04□□□□□ -0.16
PHGDH-212ENST00000641247 EVC2Q86UK5 1308 aa14.04□□□□□ -0.16
PHGDH-212ENST00000641247 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
PHGDH-212ENST00000641247 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
PHGDH-212ENST00000641247 CCNL1Q9UK58 526 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-212ENST00000641247 KTN1Q86UP2 1357 aaKnown RBP14.03□□□□□ -0.16
PHGDH-212ENST00000641247 TUBGCP6Q96RT7 1819 aa14.02□□□□□ -0.16
PHGDH-212ENST00000641247 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms