RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 RTL1A6NKG5 1358 aa12.35□□□□□ -0.43
SCARB2-225ENST00000640900 MTHFSP49914 203 aa12.35□□□□□ -0.43
SCARB2-225ENST00000640900 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
SCARB2-225ENST00000640900 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
SCARB2-225ENST00000640900 LMO7Q8WWI1 1683 aa12.34□□□□□ -0.43
SCARB2-225ENST00000640900 SPATA31A6Q5VVP1 1343 aa12.34□□□□□ -0.43
SCARB2-225ENST00000640900 RRS1Q15050 365 aaKnown RBP12.33□□□□□ -0.44
SCARB2-225ENST00000640900 CCDC184Q52MB2 194 aa12.33□□□□□ -0.44
SCARB2-225ENST00000640900 IP6K1Q92551 441 aa12.33□□□□□ -0.44
SCARB2-225ENST00000640900 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
SCARB2-225ENST00000640900 LTN1O94822 1766 aa12.33□□□□□ -0.44
SCARB2-225ENST00000640900 FLT4P35916 1363 aa12.32□□□□□ -0.44
SCARB2-225ENST00000640900 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
SCARB2-225ENST00000640900 TNNT2P45379 298 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-225ENST00000640900 HOXC9P31274 260 aa12.31□□□□□ -0.44
SCARB2-225ENST00000640900 LRP6O75581 1613 aa12.3□□□□□ -0.44
SCARB2-225ENST00000640900 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
SCARB2-225ENST00000640900 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
SCARB2-225ENST00000640900 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
SCARB2-225ENST00000640900 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
SCARB2-225ENST00000640900 CAMTA1Q9Y6Y1 1673 aa12.29□□□□□ -0.44
SCARB2-225ENST00000640900 COL14A1Q05707 1796 aaKnown RBP12.29□□□□□ -0.44
SCARB2-225ENST00000640900 IL13P35225 146 aa12.29□□□□□ -0.44
SCARB2-225ENST00000640900 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
SCARB2-225ENST00000640900 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
SCARB2-225ENST00000640900 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
SCARB2-225ENST00000640900 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
SCARB2-225ENST00000640900 SLIT2O94813 1529 aa12.28□□□□□ -0.44
SCARB2-225ENST00000640900 SOX12O15370 315 aa12.28□□□□□ -0.44
SCARB2-225ENST00000640900 PNISRQ8TF01 805 aaKnown RBP12.28□□□□□ -0.44
SCARB2-225ENST00000640900 CAPN15O75808 1086 aa12.27□□□□□ -0.45
SCARB2-225ENST00000640900 AMPHP49418 695 aa12.27□□□□□ -0.45
SCARB2-225ENST00000640900 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
SCARB2-225ENST00000640900 FNBP4Q8N3X1 1017 aaPredicted RBP12.27□□□□□ -0.45
SCARB2-225ENST00000640900 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
SCARB2-225ENST00000640900 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
SCARB2-225ENST00000640900 ERBB3P21860 1342 aa12.26□□□□□ -0.45
SCARB2-225ENST00000640900 COL5A2P05997 1499 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-225ENST00000640900 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
SCARB2-225ENST00000640900 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
SCARB2-225ENST00000640900 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
SCARB2-225ENST00000640900 KDRP35968 1356 aa12.25□□□□□ -0.45
SCARB2-225ENST00000640900 NRAPQ86VF7 1730 aa12.25□□□□□ -0.45
SCARB2-225ENST00000640900 PPM1GO15355 546 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-225ENST00000640900 DIAPH1O60610 1272 aaKnown RBP12.24□□□□□ -0.45
SCARB2-225ENST00000640900 BCL9LQ86UU0 1499 aa12.24□□□□□ -0.45
SCARB2-225ENST00000640900 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
SCARB2-225ENST00000640900 MRS2Q9HD23 443 aa12.24□□□□□ -0.45
SCARB2-225ENST00000640900 PLCH1Q4KWH8 1693 aa12.23□□□□□ -0.45
SCARB2-225ENST00000640900 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
SCARB2-225ENST00000640900 WDR17Q8IZU2 1322 aa12.22□□□□□ -0.45
SCARB2-225ENST00000640900 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-225ENST00000640900 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-225ENST00000640900 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
SCARB2-225ENST00000640900 ADAMTS2O95450 1211 aa12.22□□□□□ -0.45
SCARB2-225ENST00000640900 HAP1P54257 671 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-225ENST00000640900 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
SCARB2-225ENST00000640900 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
SCARB2-225ENST00000640900 EYA1Q99502 592 aa12.22□□□□□ -0.45
SCARB2-225ENST00000640900 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
SCARB2-225ENST00000640900 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
SCARB2-225ENST00000640900 NBPF6Q5VWK0 638 aa12.21□□□□□ -0.45
SCARB2-225ENST00000640900 NBPF4Q96M43 638 aa12.21□□□□□ -0.45
SCARB2-225ENST00000640900 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
SCARB2-225ENST00000640900 ADAMTS8Q9UP79 889 aa12.21□□□□□ -0.45
SCARB2-225ENST00000640900 CARD10Q9BWT7 1032 aa12.2□□□□□ -0.46
SCARB2-225ENST00000640900 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
SCARB2-225ENST00000640900 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
SCARB2-225ENST00000640900 FCHSD2O94868 740 aa12.19□□□□□ -0.46
SCARB2-225ENST00000640900 UNC5CLQ8IV45 518 aa12.19□□□□□ -0.46
SCARB2-225ENST00000640900 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
SCARB2-225ENST00000640900 RSPH6AQ9H0K4 717 aa12.19□□□□□ -0.46
SCARB2-225ENST00000640900 CRB1P82279 1406 aa12.19□□□□□ -0.46
SCARB2-225ENST00000640900 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
SCARB2-225ENST00000640900 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-225ENST00000640900 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
SCARB2-225ENST00000640900 VPS72Q15906 364 aa12.17□□□□□ -0.46
SCARB2-225ENST00000640900 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
SCARB2-225ENST00000640900 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
SCARB2-225ENST00000640900 DISP2A7MBM2 1401 aa12.17□□□□□ -0.46
SCARB2-225ENST00000640900 ATRNO75882 1429 aa12.17□□□□□ -0.46
SCARB2-225ENST00000640900 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
SCARB2-225ENST00000640900 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
SCARB2-225ENST00000640900 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
SCARB2-225ENST00000640900 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
SCARB2-225ENST00000640900 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-225ENST00000640900 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCARB2-225ENST00000640900 LTV1Q96GA3 475 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-225ENST00000640900 C8orf37Q96NL8 207 aa12.16□□□□□ -0.46
SCARB2-225ENST00000640900 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-225ENST00000640900 AFF2P51816 1311 aa12.15□□□□□ -0.46
SCARB2-225ENST00000640900 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.46
SCARB2-225ENST00000640900 SULT6B1Q6IMI4 303 aa12.15□□□□□ -0.46
SCARB2-225ENST00000640900 U2SURPO15042 1029 aaKnown RBP12.14□□□□□ -0.47
SCARB2-225ENST00000640900 EVA1CP58658 441 aa12.14□□□□□ -0.47
SCARB2-225ENST00000640900 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
SCARB2-225ENST00000640900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCARB2-225ENST00000640900 USP21Q9UK80 565 aa12.14□□□□□ -0.47
SCARB2-225ENST00000640900 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
SCARB2-225ENST00000640900 MEGF6O75095 1541 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms