RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 PTSQ03393 145 aa9.7□□□□□ -0.86
AP3S1-209ENST00000640413 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.7□□□□□ -0.86
AP3S1-209ENST00000640413 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
AP3S1-209ENST00000640413 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
AP3S1-209ENST00000640413 CNTNAP3BQ96NU0 1288 aa9.68□□□□□ -0.86
AP3S1-209ENST00000640413 ARHGAP9Q9BRR9 750 aa9.68□□□□□ -0.86
AP3S1-209ENST00000640413 CNTNAP3Q9BZ76 1288 aa9.68□□□□□ -0.86
AP3S1-209ENST00000640413 RSPH6AQ9H0K4 717 aa9.68□□□□□ -0.86
AP3S1-209ENST00000640413 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
AP3S1-209ENST00000640413 Q6ZVU0 165 aa9.67□□□□□ -0.86
AP3S1-209ENST00000640413 FBXO31Q5XUX0 539 aaPredicted RBP9.66□□□□□ -0.86
AP3S1-209ENST00000640413 PDXDC2PQ6P474 469 aa9.66□□□□□ -0.86
AP3S1-209ENST00000640413 KCTD15Q96SI1 283 aaPredicted RBP9.66□□□□□ -0.86
AP3S1-209ENST00000640413 SPINT1O43278 529 aa9.65□□□□□ -0.86
AP3S1-209ENST00000640413 KCNMA1Q12791 1236 aa9.65□□□□□ -0.86
AP3S1-209ENST00000640413 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
AP3S1-209ENST00000640413 FKBPLQ9UIM3 349 aa9.65□□□□□ -0.86
AP3S1-209ENST00000640413 GSK3AP49840 483 aa9.64□□□□□ -0.87
AP3S1-209ENST00000640413 NR6A1Q15406 480 aa9.64□□□□□ -0.87
AP3S1-209ENST00000640413 ZBTB33Q86T24 672 aa9.64□□□□□ -0.87
AP3S1-209ENST00000640413 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
AP3S1-209ENST00000640413 SLC10A4Q96EP9 437 aa9.64□□□□□ -0.87
AP3S1-209ENST00000640413 COL25A1Q9BXS0 654 aaPredicted RBP9.64□□□□□ -0.87
AP3S1-209ENST00000640413 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
AP3S1-209ENST00000640413 CTSOP43234 321 aaPredicted RBP9.62□□□□□ -0.87
AP3S1-209ENST00000640413 RELBQ01201 579 aa9.62□□□□□ -0.87
AP3S1-209ENST00000640413 INTS6LQ5JSJ4 861 aaKnown RBP9.62□□□□□ -0.87
AP3S1-209ENST00000640413 RNFT1Q5M7Z0 435 aa9.61□□□□□ -0.87
AP3S1-209ENST00000640413 PROCA1Q8NCQ7 364 aaPredicted RBP9.61□□□□□ -0.87
AP3S1-209ENST00000640413 NANOS1Q8WY41 292 aaKnown RBP9.61□□□□□ -0.87
AP3S1-209ENST00000640413 INSM2Q96T92 566 aaPredicted RBP9.61□□□□□ -0.87
AP3S1-209ENST00000640413 OCSTAMPQ9BR26 566 aa9.61□□□□□ -0.87
AP3S1-209ENST00000640413 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
AP3S1-209ENST00000640413 SLC35F4A4IF30 521 aa9.6□□□□□ -0.87
AP3S1-209ENST00000640413 DHX9Q08211 1270 aaKnown RBP9.6□□□□□ -0.87
AP3S1-209ENST00000640413 VWA5B2Q8N398 1253 aa9.6□□□□□ -0.87
AP3S1-209ENST00000640413 CDV3Q9UKY7 258 aaKnown RBP9.6□□□□□ -0.87
AP3S1-209ENST00000640413 ZNF395Q9H8N7 513 aaPredicted RBP9.59□□□□□ -0.87
AP3S1-209ENST00000640413 TMPRSS4Q9NRS4 437 aa9.59□□□□□ -0.87
AP3S1-209ENST00000640413 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
AP3S1-209ENST00000640413 LOC100996750A0A140TA64 210 aa9.58□□□□□ -0.88
AP3S1-209ENST00000640413 CDC14CA4D256 554 aa9.58□□□□□ -0.88
AP3S1-209ENST00000640413 RAB15P59190 212 aa9.58□□□□□ -0.88
AP3S1-209ENST00000640413 SKIV2LQ15477 1246 aaKnown RBP9.58□□□□□ -0.88
AP3S1-209ENST00000640413 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
AP3S1-209ENST00000640413 KRTAP4-6Q9BYQ5 205 aa9.58□□□□□ -0.88
AP3S1-209ENST00000640413 POLMQ9NP87 494 aaPredicted RBP9.58□□□□□ -0.88
AP3S1-209ENST00000640413 ITGA6P23229 1130 aa9.57□□□□□ -0.88
AP3S1-209ENST00000640413 PTK2Q05397 1052 aa9.57□□□□□ -0.88
AP3S1-209ENST00000640413 ZNF385CQ66K41 422 aaPredicted RBP9.57□□□□□ -0.88
AP3S1-209ENST00000640413 TMEM151AQ8N4L1 468 aa9.57□□□□□ -0.88
AP3S1-209ENST00000640413 EPS8L1Q8TE68 723 aa9.57□□□□□ -0.88
AP3S1-209ENST00000640413 WHAMMQ8TF30 809 aa9.57□□□□□ -0.88
AP3S1-209ENST00000640413 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
AP3S1-209ENST00000640413 AP1G2O75843 785 aa9.56□□□□□ -0.88
AP3S1-209ENST00000640413 RASSF7Q02833 373 aa9.56□□□□□ -0.88
AP3S1-209ENST00000640413 SUZ12Q15022 739 aaKnown RBP9.56□□□□□ -0.88
AP3S1-209ENST00000640413 GDF11O95390 407 aa9.55□□□□□ -0.88
AP3S1-209ENST00000640413 SV2AQ7L0J3 742 aa9.55□□□□□ -0.88
AP3S1-209ENST00000640413 SVOPQ8N4V2 548 aa9.55□□□□□ -0.88
AP3S1-209ENST00000640413 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
AP3S1-209ENST00000640413 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
AP3S1-209ENST00000640413 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
AP3S1-209ENST00000640413 PPP2R2DQ66LE6 453 aa9.54□□□□□ -0.88
AP3S1-209ENST00000640413 RNF217Q8TC41 542 aa9.54□□□□□ -0.88
AP3S1-209ENST00000640413 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
AP3S1-209ENST00000640413 ZNF784Q8NCA9 323 aaPredicted RBP9.53□□□□□ -0.88
AP3S1-209ENST00000640413 FAM117AQ9C073 453 aa9.53□□□□□ -0.88
AP3S1-209ENST00000640413 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.89
AP3S1-209ENST00000640413 KDM4CQ9H3R0 1056 aa9.52□□□□□ -0.89
AP3S1-209ENST00000640413 HMX1Q9NP08 348 aaPredicted RBP9.52□□□□□ -0.89
AP3S1-209ENST00000640413 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
AP3S1-209ENST00000640413 ERVH48-1M5A8F1 160 aa9.51□□□□□ -0.89
AP3S1-209ENST00000640413 ADH1AP07327 375 aa9.51□□□□□ -0.89
AP3S1-209ENST00000640413 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
AP3S1-209ENST00000640413 NBPF20Q3BBV1 942 aa9.51□□□□□ -0.89
AP3S1-209ENST00000640413 FOXD4L5Q5VV16 416 aaPredicted RBP9.51□□□□□ -0.89
AP3S1-209ENST00000640413 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
AP3S1-209ENST00000640413 LILRA1O75019 489 aa9.5□□□□□ -0.89
AP3S1-209ENST00000640413 DZIP3Q86Y13 1208 aaKnown RBP9.5□□□□□ -0.89
AP3S1-209ENST00000640413 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
AP3S1-209ENST00000640413 ARHGEF15O94989 841 aa9.49□□□□□ -0.89
AP3S1-209ENST00000640413 PTGIRP43119 386 aa9.49□□□□□ -0.89
AP3S1-209ENST00000640413 USP17L8P0C7I0 530 aa9.48□□□□□ -0.89
AP3S1-209ENST00000640413 IRS1P35568 1242 aa9.48□□□□□ -0.89
AP3S1-209ENST00000640413 CUEDC1Q9NWM3 386 aaPredicted RBP9.48□□□□□ -0.89
AP3S1-209ENST00000640413 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
AP3S1-209ENST00000640413 ESPNB1AK53 854 aa9.46□□□□□ -0.9
AP3S1-209ENST00000640413 ADAMTS2O95450 1211 aa9.46□□□□□ -0.9
AP3S1-209ENST00000640413 LYSMD3Q7Z3D4 306 aa9.46□□□□□ -0.9
AP3S1-209ENST00000640413 PNMA1Q8ND90 353 aa9.46□□□□□ -0.9
AP3S1-209ENST00000640413 CYLDQ9NQC7 956 aa9.46□□□□□ -0.9
AP3S1-209ENST00000640413 RHOQP17081 205 aa9.45□□□□□ -0.9
AP3S1-209ENST00000640413 MARSP56192 900 aaKnown RBP9.45□□□□□ -0.9
AP3S1-209ENST00000640413 LYPD4Q6UWN0 246 aa9.45□□□□□ -0.9
AP3S1-209ENST00000640413 PRICKLE2Q7Z3G6 844 aa9.45□□□□□ -0.9
AP3S1-209ENST00000640413 GAS6Q14393 721 aa9.44□□□□□ -0.9
AP3S1-209ENST00000640413 RFC5P40937 340 aa9.42□□□□□ -0.9
AP3S1-209ENST00000640413 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
AP3S1-209ENST00000640413 GPAT2Q6NUI2 795 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms