RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 BCL9LQ86UU0 1499 aa20.63■□□□□ 0.89
PAX6-268ENST00000640287 CCDC9Q9Y3X0 531 aaKnown RBP20.62■□□□□ 0.89
PAX6-268ENST00000640287 LMO7Q8WWI1 1683 aa20.62■□□□□ 0.89
PAX6-268ENST00000640287 CAMTA1Q9Y6Y1 1673 aa20.62■□□□□ 0.89
PAX6-268ENST00000640287 CSB-PGBD3P0DP91 1061 aa20.62■□□□□ 0.89
PAX6-268ENST00000640287 HOXC9P31274 260 aa20.62■□□□□ 0.89
PAX6-268ENST00000640287 IP6K1Q92551 441 aa20.62■□□□□ 0.89
PAX6-268ENST00000640287 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
PAX6-268ENST00000640287 RTL1A6NKG5 1358 aa20.62■□□□□ 0.89
PAX6-268ENST00000640287 ABCC6O95255 1503 aa20.61■□□□□ 0.89
PAX6-268ENST00000640287 FLT4P35916 1363 aa20.61■□□□□ 0.89
PAX6-268ENST00000640287 TRPC5Q9UL62 973 aaPredicted RBP20.61■□□□□ 0.89
PAX6-268ENST00000640287 COL5A2P05997 1499 aaPredicted RBP20.6■□□□□ 0.89
PAX6-268ENST00000640287 LTV1Q96GA3 475 aaPredicted RBP20.6■□□□□ 0.89
PAX6-268ENST00000640287 QTRT2Q9H974 415 aaKnown RBP20.6■□□□□ 0.89
PAX6-268ENST00000640287 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
PAX6-268ENST00000640287 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
PAX6-268ENST00000640287 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
PAX6-268ENST00000640287 COL18A1P39060 1754 aa20.59■□□□□ 0.89
PAX6-268ENST00000640287 MAP2P11137 1827 aaKnown RBP20.59■□□□□ 0.89
PAX6-268ENST00000640287 NRAPQ86VF7 1730 aa20.59■□□□□ 0.89
PAX6-268ENST00000640287 ANKRD24Q8TF21 1146 aa20.58■□□□□ 0.89
PAX6-268ENST00000640287 VPS72Q15906 364 aa20.57■□□□□ 0.88
PAX6-268ENST00000640287 HSP90AB2PQ58FF8 381 aa20.57■□□□□ 0.88
PAX6-268ENST00000640287 LARP1Q6PKG0 1096 aaKnown RBP20.57■□□□□ 0.88
PAX6-268ENST00000640287 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
PAX6-268ENST00000640287 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.57■□□□□ 0.88
PAX6-268ENST00000640287 PEAK1Q9H792 1746 aa20.57■□□□□ 0.88
PAX6-268ENST00000640287 ATRNO75882 1429 aa20.57■□□□□ 0.88
PAX6-268ENST00000640287 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
PAX6-268ENST00000640287 RALBP1Q15311 655 aa20.56■□□□□ 0.88
PAX6-268ENST00000640287 TOM1L2Q6ZVM7 507 aa20.56■□□□□ 0.88
PAX6-268ENST00000640287 ERBB3P21860 1342 aa20.56■□□□□ 0.88
PAX6-268ENST00000640287 RGPD5Q99666 1765 aa20.56■□□□□ 0.88
PAX6-268ENST00000640287 MTHFSP49914 203 aa20.56■□□□□ 0.88
PAX6-268ENST00000640287 USP35Q9P2H5 1018 aa20.56■□□□□ 0.88
PAX6-268ENST00000640287 WDR17Q8IZU2 1322 aa20.55■□□□□ 0.88
PAX6-268ENST00000640287 INSRP06213 1382 aa20.55■□□□□ 0.88
PAX6-268ENST00000640287 POTEAQ6S8J7 498 aa20.55■□□□□ 0.88
PAX6-268ENST00000640287 PPP2R1AP30153 589 aa20.54■□□□□ 0.88
PAX6-268ENST00000640287 NLRP2Q9NX02 1062 aa20.54■□□□□ 0.88
PAX6-268ENST00000640287 GJD4Q96KN9 370 aaPredicted RBP20.53■□□□□ 0.88
PAX6-268ENST00000640287 CRB1P82279 1406 aa20.53■□□□□ 0.88
PAX6-268ENST00000640287 CDK12Q9NYV4 1490 aaPredicted RBP20.53■□□□□ 0.88
PAX6-268ENST00000640287 RXRBP28702 533 aa20.52■□□□□ 0.88
PAX6-268ENST00000640287 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.88
PAX6-268ENST00000640287 ANP32CO43423 234 aa20.51■□□□□ 0.87
PAX6-268ENST00000640287 PRKRIP1Q9H875 184 aaPredicted RBP20.51■□□□□ 0.87
PAX6-268ENST00000640287 SPATA31A5Q5VU36 1347 aa20.51■□□□□ 0.87
PAX6-268ENST00000640287 SPATA31A7Q8IWB4 1347 aa20.51■□□□□ 0.87
PAX6-268ENST00000640287 SPATA31A1Q5TZJ5 1347 aa20.5■□□□□ 0.87
PAX6-268ENST00000640287 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
PAX6-268ENST00000640287 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
PAX6-268ENST00000640287 A0A0G2JS52 829 aa20.49■□□□□ 0.87
PAX6-268ENST00000640287 MYT1Q01538 1121 aa20.49■□□□□ 0.87
PAX6-268ENST00000640287 TCP11L2Q8N4U5 519 aa20.49■□□□□ 0.87
PAX6-268ENST00000640287 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
PAX6-268ENST00000640287 EIF4A2Q14240 407 aaKnown RBP20.48■□□□□ 0.87
PAX6-268ENST00000640287 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
PAX6-268ENST00000640287 GLI3P10071 1580 aa20.47■□□□□ 0.87
PAX6-268ENST00000640287 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
PAX6-268ENST00000640287 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
PAX6-268ENST00000640287 NBPF6Q5VWK0 638 aa20.45■□□□□ 0.86
PAX6-268ENST00000640287 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
PAX6-268ENST00000640287 NBPF4Q96M43 638 aa20.45■□□□□ 0.86
PAX6-268ENST00000640287 THRAP3Q9Y2W1 955 aaKnown RBP20.45■□□□□ 0.86
PAX6-268ENST00000640287 BARGINQ6ZT62 677 aa20.43■□□□□ 0.86
PAX6-268ENST00000640287 EYA1Q99502 592 aa20.43■□□□□ 0.86
PAX6-268ENST00000640287 IL13P35225 146 aa20.42■□□□□ 0.86
PAX6-268ENST00000640287 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
PAX6-268ENST00000640287 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
PAX6-268ENST00000640287 RGPD2P0DJD1 1756 aa20.4■□□□□ 0.86
PAX6-268ENST00000640287 SEPT12Q8IYM1 358 aa20.4■□□□□ 0.86
PAX6-268ENST00000640287 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
PAX6-268ENST00000640287 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
PAX6-268ENST00000640287 RGS12O14924 1447 aa20.4■□□□□ 0.86
PAX6-268ENST00000640287 IL2RBP14784 551 aa20.39■□□□□ 0.85
PAX6-268ENST00000640287 RAPGEF4Q8WZA2 1011 aa20.38■□□□□ 0.85
PAX6-268ENST00000640287 CDCA7Q9BWT1 371 aaPredicted RBP20.38■□□□□ 0.85
PAX6-268ENST00000640287 IGSF1Q8N6C5 1336 aa20.38■□□□□ 0.85
PAX6-268ENST00000640287 ONECUT3O60422 494 aaPredicted RBP20.37■□□□□ 0.85
PAX6-268ENST00000640287 SULT6B1Q6IMI4 303 aa20.37■□□□□ 0.85
PAX6-268ENST00000640287 DISP2A7MBM2 1401 aa20.35■□□□□ 0.85
PAX6-268ENST00000640287 HMOX1P09601 288 aa20.35■□□□□ 0.85
PAX6-268ENST00000640287 TATP17735 454 aaPredicted RBP20.35■□□□□ 0.85
PAX6-268ENST00000640287 DDB1Q16531 1140 aa20.35■□□□□ 0.85
PAX6-268ENST00000640287 THSD7AQ9UPZ6 1657 aa20.34■□□□□ 0.85
PAX6-268ENST00000640287 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
PAX6-268ENST00000640287 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
PAX6-268ENST00000640287 PDE3BQ13370 1112 aa20.34■□□□□ 0.85
PAX6-268ENST00000640287 AEBP1Q8IUX7 1158 aa20.34■□□□□ 0.85
PAX6-268ENST00000640287 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
PAX6-268ENST00000640287 EXOC5O00471 708 aa20.33■□□□□ 0.85
PAX6-268ENST00000640287 MEGF6O75095 1541 aa20.33■□□□□ 0.84
PAX6-268ENST00000640287 NCAPD2Q15021 1401 aa20.33■□□□□ 0.84
PAX6-268ENST00000640287 RGPD1P0DJD0 1748 aa20.32■□□□□ 0.84
PAX6-268ENST00000640287 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
PAX6-268ENST00000640287 PARP4Q9UKK3 1724 aaKnown RBP20.3■□□□□ 0.84
PAX6-268ENST00000640287 OVOS2A0A0G2JMS6 1433 aa20.3■□□□□ 0.84
PAX6-268ENST00000640287 LRRC37A3O60309 1634 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms