RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 C6orf118Q5T5N4 469 aa7.24□□□□□ -1.25
ATM-228ENST00000639240 PDXDC2PQ6P474 469 aa7.24□□□□□ -1.25
ATM-228ENST00000639240 VASH1Q7L8A9 365 aaPredicted RBP7.24□□□□□ -1.25
ATM-228ENST00000639240 MEIOBQ8N635 442 aa7.24□□□□□ -1.25
ATM-228ENST00000639240 AP1G2O75843 785 aa7.23□□□□□ -1.25
ATM-228ENST00000639240 GPKOWQ92917 476 aaPredicted RBP eCLIP7.23□□□□□ -1.25
ATM-228ENST00000639240 CBLBQ13191 982 aa7.22□□□□□ -1.25
ATM-228ENST00000639240 RFC5P40937 340 aa7.21□□□□□ -1.26
ATM-228ENST00000639240 SCARF1Q14162 830 aa7.21□□□□□ -1.26
ATM-228ENST00000639240 PPP1R26Q5T8A7 1209 aaPredicted RBP7.21□□□□□ -1.26
ATM-228ENST00000639240 NPAS3Q8IXF0 933 aa7.21□□□□□ -1.26
ATM-228ENST00000639240 CCDC116Q8IYX3 515 aa7.21□□□□□ -1.26
ATM-228ENST00000639240 LINC00528Q8N1L1 170 aa7.21□□□□□ -1.26
ATM-228ENST00000639240 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.26
ATM-228ENST00000639240 USP17L8P0C7I0 530 aa7.2□□□□□ -1.26
ATM-228ENST00000639240 IL27Q8NEV9 243 aa7.2□□□□□ -1.26
ATM-228ENST00000639240 TRIM34Q9BYJ4 488 aa7.2□□□□□ -1.26
ATM-228ENST00000639240 DNMT3LQ9UJW3 386 aa7.2□□□□□ -1.26
ATM-228ENST00000639240 SOS2Q07890 1332 aaPredicted RBP7.2□□□□□ -1.26
ATM-228ENST00000639240 BMP2P12643 396 aa7.19□□□□□ -1.26
ATM-228ENST00000639240 SLC16A10Q8TF71 515 aa7.19□□□□□ -1.26
ATM-228ENST00000639240 KCTD15Q96SI1 283 aaPredicted RBP7.19□□□□□ -1.26
ATM-228ENST00000639240 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
ATM-228ENST00000639240 Q6ZVU0 165 aa7.18□□□□□ -1.26
ATM-228ENST00000639240 ADAM32Q8TC27 787 aa7.18□□□□□ -1.26
ATM-228ENST00000639240 EMILIN1Q9Y6C2 1016 aa7.18□□□□□ -1.26
ATM-228ENST00000639240 IRF7Q92985 503 aa7.17□□□□□ -1.26
ATM-228ENST00000639240 ATP1B4Q9UN42 357 aaPredicted RBP7.17□□□□□ -1.26
ATM-228ENST00000639240 ZC3H4Q9UPT8 1303 aaKnown RBP7.17□□□□□ -1.26
ATM-228ENST00000639240 MAN1A2O60476 641 aa7.16□□□□□ -1.26
ATM-228ENST00000639240 ZBTB33Q86T24 672 aa7.16□□□□□ -1.26
ATM-228ENST00000639240 GOPCQ9HD26 462 aa7.16□□□□□ -1.26
ATM-228ENST00000639240 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
ATM-228ENST00000639240 PPFIA3O75145 1194 aa7.15□□□□□ -1.26
ATM-228ENST00000639240 VSIG8P0DPA2 414 aa7.15□□□□□ -1.26
ATM-228ENST00000639240 PTK2Q05397 1052 aa7.15□□□□□ -1.26
ATM-228ENST00000639240 KDF1Q8NAX2 398 aaPredicted RBP7.15□□□□□ -1.26
ATM-228ENST00000639240 SLC10A4Q96EP9 437 aa7.15□□□□□ -1.26
ATM-228ENST00000639240 GJD4Q96KN9 370 aaPredicted RBP7.15□□□□□ -1.26
ATM-228ENST00000639240 AGBL1Q96MI9 1066 aa7.15□□□□□ -1.26
ATM-228ENST00000639240 TSEN34Q9BSV6 310 aaKnown RBP7.15□□□□□ -1.26
ATM-228ENST00000639240 GPSM3Q9Y4H4 160 aa7.15□□□□□ -1.26
ATM-228ENST00000639240 FIGNL2A6NMB9 653 aa7.14□□□□□ -1.27
ATM-228ENST00000639240 ADD1P35611 737 aaKnown RBP7.14□□□□□ -1.27
ATM-228ENST00000639240 SPINT1O43278 529 aa7.13□□□□□ -1.27
ATM-228ENST00000639240 GPR37L1O60883 481 aa7.13□□□□□ -1.27
ATM-228ENST00000639240 LILRA1O75019 489 aa7.13□□□□□ -1.27
ATM-228ENST00000639240 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
ATM-228ENST00000639240 TTLL8A6PVC2 850 aa7.12□□□□□ -1.27
ATM-228ENST00000639240 UPP2O95045 317 aa7.12□□□□□ -1.27
ATM-228ENST00000639240 CTSOP43234 321 aaPredicted RBP7.12□□□□□ -1.27
ATM-228ENST00000639240 ZNF784Q8NCA9 323 aaPredicted RBP7.12□□□□□ -1.27
ATM-228ENST00000639240 PGPEP1Q9NXJ5 209 aa7.12□□□□□ -1.27
ATM-228ENST00000639240 FAM181BA6NEQ2 426 aa7.11□□□□□ -1.27
ATM-228ENST00000639240 ESPNB1AK53 854 aa7.11□□□□□ -1.27
ATM-228ENST00000639240 ERVH48-1M5A8F1 160 aa7.11□□□□□ -1.27
ATM-228ENST00000639240 RAB15P59190 212 aa7.11□□□□□ -1.27
ATM-228ENST00000639240 PCMTD1Q96MG8 357 aaPredicted RBP7.11□□□□□ -1.27
ATM-228ENST00000639240 CDV3Q9UKY7 258 aaKnown RBP7.11□□□□□ -1.27
ATM-228ENST00000639240 RELBQ01201 579 aa7.1□□□□□ -1.27
ATM-228ENST00000639240 KRT76Q01546 638 aa7.1□□□□□ -1.27
ATM-228ENST00000639240 PTSQ03393 145 aa7.1□□□□□ -1.27
ATM-228ENST00000639240 ZSCAN1Q8NBB4 408 aa7.1□□□□□ -1.27
ATM-228ENST00000639240 INSM2Q96T92 566 aaPredicted RBP7.1□□□□□ -1.27
ATM-228ENST00000639240 ZNF395Q9H8N7 513 aaPredicted RBP7.1□□□□□ -1.27
ATM-228ENST00000639240 TMEM259Q4ZIN3 620 aa7.09□□□□□ -1.27
ATM-228ENST00000639240 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
ATM-228ENST00000639240 FBXO45P0C2W1 286 aa7.08□□□□□ -1.28
ATM-228ENST00000639240 DHX9Q08211 1270 aaKnown RBP7.08□□□□□ -1.28
ATM-228ENST00000639240 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.08□□□□□ -1.28
ATM-228ENST00000639240 DZIP3Q86Y13 1208 aaKnown RBP7.08□□□□□ -1.28
ATM-228ENST00000639240 SENP3-EIF4A1A0A087X0R7 540 aa7.07□□□□□ -1.28
ATM-228ENST00000639240 SLC35F4A4IF30 521 aa7.07□□□□□ -1.28
ATM-228ENST00000639240 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
ATM-228ENST00000639240 NBPF20Q3BBV1 942 aa7.07□□□□□ -1.28
ATM-228ENST00000639240 FOXD4L5Q5VV16 416 aaPredicted RBP7.06□□□□□ -1.28
ATM-228ENST00000639240 CCDC155Q8N6L0 562 aa7.06□□□□□ -1.28
ATM-228ENST00000639240 MTMR14Q8NCE2 650 aa7.06□□□□□ -1.28
ATM-228ENST00000639240 RNF217Q8TC41 542 aa7.06□□□□□ -1.28
ATM-228ENST00000639240 SNRKQ9NRH2 765 aa7.06□□□□□ -1.28
ATM-228ENST00000639240 ZBBXA8MT70 800 aa7.05□□□□□ -1.28
ATM-228ENST00000639240 ADH1AP07327 375 aa7.05□□□□□ -1.28
ATM-228ENST00000639240 CYLDQ9NQC7 956 aa7.05□□□□□ -1.28
ATM-228ENST00000639240 PTGIRP43119 386 aa7.04□□□□□ -1.28
ATM-228ENST00000639240 RNFT1Q5M7Z0 435 aa7.04□□□□□ -1.28
ATM-228ENST00000639240 NANOS1Q8WY41 292 aaKnown RBP7.04□□□□□ -1.28
ATM-228ENST00000639240 POLMQ9NP87 494 aaPredicted RBP7.03□□□□□ -1.28
ATM-228ENST00000639240 PCDHB9Q9Y5E1 797 aa7.03□□□□□ -1.28
ATM-228ENST00000639240 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
ATM-228ENST00000639240 SCTRP47872 440 aa7.02□□□□□ -1.29
ATM-228ENST00000639240 PNMA1Q8ND90 353 aa7.02□□□□□ -1.29
ATM-228ENST00000639240 CNTNAP3BQ96NU0 1288 aa7.02□□□□□ -1.29
ATM-228ENST00000639240 CNTNAP3Q9BZ76 1288 aa7.02□□□□□ -1.29
ATM-228ENST00000639240 CUEDC1Q9NWM3 386 aaPredicted RBP7.02□□□□□ -1.29
ATM-228ENST00000639240 ITGA6P23229 1130 aa7.01□□□□□ -1.29
ATM-228ENST00000639240 XP32Q5T750 250 aa7.01□□□□□ -1.29
ATM-228ENST00000639240 SEPT12Q8IYM1 358 aa7.01□□□□□ -1.29
ATM-228ENST00000639240 VWA5B2Q8N398 1253 aa7.01□□□□□ -1.29
ATM-228ENST00000639240 BANK1Q8NDB2 785 aa7.01□□□□□ -1.29
ATM-228ENST00000639240 COL25A1Q9BXS0 654 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms