RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
PAX6-246ENST00000638963 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
PAX6-246ENST00000638963 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
PAX6-246ENST00000638963 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
PAX6-246ENST00000638963 AXIN2Q9Y2T1 843 aa12.95□□□□□ -0.34
PAX6-246ENST00000638963 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
PAX6-246ENST00000638963 CDK12Q9NYV4 1490 aaPredicted RBP12.95□□□□□ -0.34
PAX6-246ENST00000638963 HOXC9P31274 260 aa12.94□□□□□ -0.34
PAX6-246ENST00000638963 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
PAX6-246ENST00000638963 LTV1Q96GA3 475 aaPredicted RBP12.94□□□□□ -0.34
PAX6-246ENST00000638963 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
PAX6-246ENST00000638963 COL14A1Q05707 1796 aaKnown RBP12.94□□□□□ -0.34
PAX6-246ENST00000638963 FLT4P35916 1363 aa12.93□□□□□ -0.34
PAX6-246ENST00000638963 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
PAX6-246ENST00000638963 IP6K1Q92551 441 aa12.93□□□□□ -0.34
PAX6-246ENST00000638963 C8orf37Q96NL8 207 aa12.93□□□□□ -0.34
PAX6-246ENST00000638963 RTL1A6NKG5 1358 aa12.93□□□□□ -0.34
PAX6-246ENST00000638963 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
PAX6-246ENST00000638963 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
PAX6-246ENST00000638963 NRAPQ86VF7 1730 aa12.91□□□□□ -0.34
PAX6-246ENST00000638963 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
PAX6-246ENST00000638963 BTG4Q9NY30 223 aa12.9□□□□□ -0.34
PAX6-246ENST00000638963 INSRP06213 1382 aa12.9□□□□□ -0.34
PAX6-246ENST00000638963 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
PAX6-246ENST00000638963 ANKRD24Q8TF21 1146 aa12.9□□□□□ -0.35
PAX6-246ENST00000638963 CFAP53Q96M91 514 aa12.9□□□□□ -0.35
PAX6-246ENST00000638963 STRN4Q9NRL3 753 aa12.9□□□□□ -0.35
PAX6-246ENST00000638963 ABCC6O95255 1503 aa12.89□□□□□ -0.35
PAX6-246ENST00000638963 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
PAX6-246ENST00000638963 KIF24Q5T7B8 1368 aa12.89□□□□□ -0.35
PAX6-246ENST00000638963 NGLY1Q96IV0 654 aa12.89□□□□□ -0.35
PAX6-246ENST00000638963 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
PAX6-246ENST00000638963 SLIT2O94813 1529 aa12.88□□□□□ -0.35
PAX6-246ENST00000638963 DIAPH1O60610 1272 aaKnown RBP12.88□□□□□ -0.35
PAX6-246ENST00000638963 IL13P35225 146 aa12.88□□□□□ -0.35
PAX6-246ENST00000638963 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
PAX6-246ENST00000638963 ERBB3P21860 1342 aa12.88□□□□□ -0.35
PAX6-246ENST00000638963 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
PAX6-246ENST00000638963 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
PAX6-246ENST00000638963 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
PAX6-246ENST00000638963 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
PAX6-246ENST00000638963 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
PAX6-246ENST00000638963 AFF2P51816 1311 aa12.86□□□□□ -0.35
PAX6-246ENST00000638963 EVA1CP58658 441 aa12.86□□□□□ -0.35
PAX6-246ENST00000638963 EYA1Q99502 592 aa12.86□□□□□ -0.35
PAX6-246ENST00000638963 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
PAX6-246ENST00000638963 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
PAX6-246ENST00000638963 HMOX1P09601 288 aa12.85□□□□□ -0.35
PAX6-246ENST00000638963 NBPF6Q5VWK0 638 aa12.85□□□□□ -0.35
PAX6-246ENST00000638963 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
PAX6-246ENST00000638963 NBPF4Q96M43 638 aa12.85□□□□□ -0.35
PAX6-246ENST00000638963 NLRP2Q9NX02 1062 aa12.85□□□□□ -0.35
PAX6-246ENST00000638963 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
PAX6-246ENST00000638963 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
PAX6-246ENST00000638963 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
PAX6-246ENST00000638963 FNBP4Q8N3X1 1017 aaPredicted RBP12.84□□□□□ -0.35
PAX6-246ENST00000638963 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
PAX6-246ENST00000638963 USP21Q9UK80 565 aa12.84□□□□□ -0.35
PAX6-246ENST00000638963 WDR17Q8IZU2 1322 aa12.84□□□□□ -0.35
PAX6-246ENST00000638963 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.83□□□□□ -0.35
PAX6-246ENST00000638963 SENP3-EIF4A1A0A087X0R7 540 aa12.83□□□□□ -0.36
PAX6-246ENST00000638963 TOM1L2Q6ZVM7 507 aa12.83□□□□□ -0.36
PAX6-246ENST00000638963 USP35Q9P2H5 1018 aa12.83□□□□□ -0.36
PAX6-246ENST00000638963 WDR43Q15061 677 aaKnown RBP eCLIP12.82□□□□□ -0.36
PAX6-246ENST00000638963 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
PAX6-246ENST00000638963 UNC5CLQ8IV45 518 aa12.82□□□□□ -0.36
PAX6-246ENST00000638963 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
PAX6-246ENST00000638963 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
PAX6-246ENST00000638963 NUDCQ9Y266 331 aa12.81□□□□□ -0.36
PAX6-246ENST00000638963 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
PAX6-246ENST00000638963 CRB1P82279 1406 aa12.81□□□□□ -0.36
PAX6-246ENST00000638963 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
PAX6-246ENST00000638963 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
PAX6-246ENST00000638963 WNK3Q9BYP7 1800 aa12.8□□□□□ -0.36
PAX6-246ENST00000638963 MEGF6O75095 1541 aa12.79□□□□□ -0.36
PAX6-246ENST00000638963 SPATA31A5Q5VU36 1347 aa12.79□□□□□ -0.36
PAX6-246ENST00000638963 SPATA31A7Q8IWB4 1347 aa12.79□□□□□ -0.36
PAX6-246ENST00000638963 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
PAX6-246ENST00000638963 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
PAX6-246ENST00000638963 GLI3P10071 1580 aa12.79□□□□□ -0.36
PAX6-246ENST00000638963 ATRNO75882 1429 aa12.78□□□□□ -0.36
PAX6-246ENST00000638963 SPATA31A1Q5TZJ5 1347 aa12.78□□□□□ -0.36
PAX6-246ENST00000638963 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
PAX6-246ENST00000638963 VPS72Q15906 364 aa12.78□□□□□ -0.36
PAX6-246ENST00000638963 RGS17Q9UGC6 210 aaPredicted RBP12.78□□□□□ -0.36
PAX6-246ENST00000638963 KDRP35968 1356 aa12.78□□□□□ -0.36
PAX6-246ENST00000638963 PHACTR3Q96KR7 559 aa12.77□□□□□ -0.37
PAX6-246ENST00000638963 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
PAX6-246ENST00000638963 TCP11L2Q8N4U5 519 aa12.76□□□□□ -0.37
PAX6-246ENST00000638963 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
PAX6-246ENST00000638963 TRPC5Q9UL62 973 aaPredicted RBP12.76□□□□□ -0.37
PAX6-246ENST00000638963 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
PAX6-246ENST00000638963 FCHSD2O94868 740 aa12.75□□□□□ -0.37
PAX6-246ENST00000638963 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
PAX6-246ENST00000638963 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
PAX6-246ENST00000638963 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
PAX6-246ENST00000638963 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
PAX6-246ENST00000638963 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
PAX6-246ENST00000638963 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
PAX6-246ENST00000638963 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms