RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 C1QTNF9BB2RNN3 333 aa4.4□□□□□ -1.71
LMBR1-222ENST00000638959 CTSOP43234 321 aaPredicted RBP4.4□□□□□ -1.71
LMBR1-222ENST00000638959 CBLBQ13191 982 aa4.4□□□□□ -1.71
LMBR1-222ENST00000638959 DOC2BQ14184 412 aa4.4□□□□□ -1.71
LMBR1-222ENST00000638959 CCDC116Q8IYX3 515 aa4.4□□□□□ -1.71
LMBR1-222ENST00000638959 KCNV2Q8TDN2 545 aa4.4□□□□□ -1.71
LMBR1-222ENST00000638959 POLMQ9NP87 494 aaPredicted RBP4.4□□□□□ -1.71
LMBR1-222ENST00000638959 CUEDC1Q9NWM3 386 aaPredicted RBP4.4□□□□□ -1.71
LMBR1-222ENST00000638959 ARTNQ5T4W7 220 aa4.39□□□□□ -1.71
LMBR1-222ENST00000638959 FOXR1Q6PIV2 292 aa4.39□□□□□ -1.71
LMBR1-222ENST00000638959 VASH1Q7L8A9 365 aaPredicted RBP4.39□□□□□ -1.71
LMBR1-222ENST00000638959 RRAGCQ9HB90 399 aa4.39□□□□□ -1.71
LMBR1-222ENST00000638959 LRRC4BQ9NT99 713 aa4.39□□□□□ -1.71
LMBR1-222ENST00000638959 OIP5O43482 229 aa4.38□□□□□ -1.71
LMBR1-222ENST00000638959 FDX1P10109 184 aa4.38□□□□□ -1.71
LMBR1-222ENST00000638959 FOXD4L6Q3SYB3 417 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-222ENST00000638959 C4orf48Q5BLP8 95 aa4.38□□□□□ -1.71
LMBR1-222ENST00000638959 RBM26Q5T8P6 1007 aaKnown RBP4.38□□□□□ -1.71
LMBR1-222ENST00000638959 FOXD4L3Q6VB84 417 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-222ENST00000638959 CD163Q86VB7 1156 aa4.38□□□□□ -1.71
LMBR1-222ENST00000638959 INSM2Q96T92 566 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-222ENST00000638959 CHRNA4P43681 627 aa4.37□□□□□ -1.71
LMBR1-222ENST00000638959 Q6ZVU0 165 aa4.37□□□□□ -1.71
LMBR1-222ENST00000638959 BPHLQ86WA6 291 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-222ENST00000638959 NUTM1Q86Y26 1132 aa4.37□□□□□ -1.71
LMBR1-222ENST00000638959 PRR7Q8TB68 274 aa4.37□□□□□ -1.71
LMBR1-222ENST00000638959 RNF217Q8TC41 542 aa4.37□□□□□ -1.71
LMBR1-222ENST00000638959 ZNF837Q96EG3 531 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-222ENST00000638959 PGPEP1Q9NXJ5 209 aa4.37□□□□□ -1.71
LMBR1-222ENST00000638959 PCDHGC3Q9UN70 934 aa4.37□□□□□ -1.71
LMBR1-222ENST00000638959 SEMA3EO15041 775 aa4.36□□□□□ -1.71
LMBR1-222ENST00000638959 GPR37O15354 613 aa4.36□□□□□ -1.71
LMBR1-222ENST00000638959 RELBQ01201 579 aa4.36□□□□□ -1.71
LMBR1-222ENST00000638959 NSFL1CQ9UNZ2 370 aaKnown RBP4.36□□□□□ -1.71
LMBR1-222ENST00000638959 SHISA8B8ZZ34 492 aa4.35□□□□□ -1.71
LMBR1-222ENST00000638959 MX2P20592 715 aa4.35□□□□□ -1.71
LMBR1-222ENST00000638959 PPP1R26Q5T8A7 1209 aaPredicted RBP4.35□□□□□ -1.71
LMBR1-222ENST00000638959 AGBL1Q96MI9 1066 aa4.35□□□□□ -1.71
LMBR1-222ENST00000638959 SUV39H2Q9H5I1 410 aa4.35□□□□□ -1.71
LMBR1-222ENST00000638959 MAP4K5Q9Y4K4 846 aa4.35□□□□□ -1.71
LMBR1-222ENST00000638959 MDM2Q00987 491 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-222ENST00000638959 TRIM22Q8IYM9 498 aa4.34□□□□□ -1.71
LMBR1-222ENST00000638959 TRERF1Q96PN7 1200 aa4.34□□□□□ -1.71
LMBR1-222ENST00000638959 OXCT2Q9BYC2 517 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-222ENST00000638959 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
LMBR1-222ENST00000638959 MAP10Q9P2G4 905 aa4.34□□□□□ -1.71
LMBR1-222ENST00000638959 PIK3R2O00459 728 aa4.33□□□□□ -1.72
LMBR1-222ENST00000638959 YBX3P16989 372 aaKnown RBP eCLIP4.33□□□□□ -1.72
LMBR1-222ENST00000638959 PRPF38BQ5VTL8 546 aaKnown RBP4.33□□□□□ -1.72
LMBR1-222ENST00000638959 DESI1Q6ICB0 168 aa4.33□□□□□ -1.72
LMBR1-222ENST00000638959 RIPOR1Q6ZS17 1223 aa4.33□□□□□ -1.72
LMBR1-222ENST00000638959 GTPBP3Q969Y2 492 aaKnown RBP4.33□□□□□ -1.72
LMBR1-222ENST00000638959 GMCL1Q96IK5 515 aa4.33□□□□□ -1.72
LMBR1-222ENST00000638959 CFAP44Q96MT7 982 aa4.33□□□□□ -1.72
LMBR1-222ENST00000638959 ZNF395Q9H8N7 513 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-222ENST00000638959 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.33□□□□□ -1.72
LMBR1-222ENST00000638959 C1QTNF2Q9BXJ5 285 aa4.32□□□□□ -1.72
LMBR1-222ENST00000638959 MAGEB6P1A0A0J9YX57 407 aa4.31□□□□□ -1.72
LMBR1-222ENST00000638959 AMPD1P23109 780 aa4.31□□□□□ -1.72
LMBR1-222ENST00000638959 GATA4P43694 442 aa4.31□□□□□ -1.72
LMBR1-222ENST00000638959 MTMR2Q13614 643 aa4.31□□□□□ -1.72
LMBR1-222ENST00000638959 FOXD4L5Q5VV16 416 aaPredicted RBP4.31□□□□□ -1.72
LMBR1-222ENST00000638959 LYSMD3Q7Z3D4 306 aa4.31□□□□□ -1.72
LMBR1-222ENST00000638959 GNB5O14775 395 aa4.3□□□□□ -1.72
LMBR1-222ENST00000638959 RHOQP17081 205 aa4.3□□□□□ -1.72
LMBR1-222ENST00000638959 MAP2K3P46734 347 aa4.3□□□□□ -1.72
LMBR1-222ENST00000638959 DBN1Q16643 649 aa4.3□□□□□ -1.72
LMBR1-222ENST00000638959 RSPO4Q2I0M5 234 aaPredicted RBP4.3□□□□□ -1.72
LMBR1-222ENST00000638959 LYPD8Q6UX82 237 aa4.3□□□□□ -1.72
LMBR1-222ENST00000638959 TRMT44Q8IYL2 757 aaKnown RBP4.3□□□□□ -1.72
LMBR1-222ENST00000638959 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
LMBR1-222ENST00000638959 NOP53Q9NZM5 478 aaKnown RBP4.3□□□□□ -1.72
LMBR1-222ENST00000638959 SPDYE5A6NIY4 337 aa4.29□□□□□ -1.72
LMBR1-222ENST00000638959 H7C1W4 665 aa4.29□□□□□ -1.72
LMBR1-222ENST00000638959 F12P00748 615 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-222ENST00000638959 LINC00114Q6XXX2 140 aa4.29□□□□□ -1.72
LMBR1-222ENST00000638959 EDARADDQ8WWZ3 215 aa4.29□□□□□ -1.72
LMBR1-222ENST00000638959 CARD14Q9BXL6 1004 aa4.29□□□□□ -1.72
LMBR1-222ENST00000638959 NDUFV2P19404 249 aa4.28□□□□□ -1.72
LMBR1-222ENST00000638959 TXKP42681 527 aa4.28□□□□□ -1.72
LMBR1-222ENST00000638959 DHX9Q08211 1270 aaKnown RBP4.28□□□□□ -1.72
LMBR1-222ENST00000638959 LRP8Q14114 963 aa4.28□□□□□ -1.72
LMBR1-222ENST00000638959 MCTP1Q6DN14 999 aa4.28□□□□□ -1.72
LMBR1-222ENST00000638959 SMYD5Q6GMV2 418 aa4.28□□□□□ -1.72
LMBR1-222ENST00000638959 C1orf229Q6ZS94 237 aaPredicted RBP4.28□□□□□ -1.72
LMBR1-222ENST00000638959 PAXIP1Q6ZW49 1069 aaPredicted RBP4.28□□□□□ -1.72
LMBR1-222ENST00000638959 PRICKLE2Q7Z3G6 844 aa4.28□□□□□ -1.72
LMBR1-222ENST00000638959 PAX4O43316 350 aa4.27□□□□□ -1.73
LMBR1-222ENST00000638959 DYRK3O43781 588 aa4.27□□□□□ -1.73
LMBR1-222ENST00000638959 NKAPLQ5M9Q1 402 aa4.27□□□□□ -1.73
LMBR1-222ENST00000638959 GDF2Q9UK05 429 aaPredicted RBP4.27□□□□□ -1.73
LMBR1-222ENST00000638959 PRSS36Q5K4E3 855 aa4.26□□□□□ -1.73
LMBR1-222ENST00000638959 NBPF14Q5TI25 921 aa4.26□□□□□ -1.73
LMBR1-222ENST00000638959 GPIHBP1Q8IV16 184 aa4.26□□□□□ -1.73
LMBR1-222ENST00000638959 ARMC2Q8NEN0 867 aa4.26□□□□□ -1.73
LMBR1-222ENST00000638959 GAS2L1Q99501 681 aaPredicted RBP4.26□□□□□ -1.73
LMBR1-222ENST00000638959 GPCPD1Q9NPB8 672 aa4.26□□□□□ -1.73
LMBR1-222ENST00000638959 FAM217BQ9NTX9 383 aaPredicted RBP4.26□□□□□ -1.73
LMBR1-222ENST00000638959 MOXD2PA6NHM9 499 aa4.25□□□□□ -1.73
LMBR1-222ENST00000638959 HOXB4P17483 251 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms