RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SOX12O15370 315 aa24■■□□□ 1.43
SMN2-216ENST00000638794 TOM1L2Q6ZVM7 507 aa24■■□□□ 1.43
SMN2-216ENST00000638794 ARHGEF25Q86VW2 580 aa24■■□□□ 1.43
SMN2-216ENST00000638794 KCNH5Q8NCM2 988 aa24■■□□□ 1.43
SMN2-216ENST00000638794 PEAK1Q9H792 1746 aa24■■□□□ 1.43
SMN2-216ENST00000638794 TONSLQ96HA7 1378 aa24■■□□□ 1.43
SMN2-216ENST00000638794 WDR17Q8IZU2 1322 aa23.99■■□□□ 1.43
SMN2-216ENST00000638794 NUP188Q5SRE5 1749 aa23.98■■□□□ 1.43
SMN2-216ENST00000638794 OVOS2A0A0G2JMS6 1433 aa23.97■■□□□ 1.43
SMN2-216ENST00000638794 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
SMN2-216ENST00000638794 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
SMN2-216ENST00000638794 CD163L1Q9NR16 1453 aa23.97■■□□□ 1.43
SMN2-216ENST00000638794 SBF2Q86WG5 1849 aa23.96■■□□□ 1.43
SMN2-216ENST00000638794 USP54Q70EL1 1684 aa23.96■■□□□ 1.43
SMN2-216ENST00000638794 DDB1Q16531 1140 aa23.94■■□□□ 1.42
SMN2-216ENST00000638794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.94■■□□□ 1.42
SMN2-216ENST00000638794 ABCC6O95255 1503 aa23.93■■□□□ 1.42
SMN2-216ENST00000638794 USP31Q70CQ4 1352 aa23.92■■□□□ 1.42
SMN2-216ENST00000638794 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
SMN2-216ENST00000638794 TMC1Q8TDI8 760 aa23.92■■□□□ 1.42
SMN2-216ENST00000638794 LTN1O94822 1766 aa23.91■■□□□ 1.42
SMN2-216ENST00000638794 CSB-PGBD3P0DP91 1061 aa23.91■■□□□ 1.42
SMN2-216ENST00000638794 NME9Q86XW9 330 aa23.9■■□□□ 1.42
SMN2-216ENST00000638794 CARD10Q9BWT7 1032 aa23.9■■□□□ 1.42
SMN2-216ENST00000638794 SLC12A5Q9H2X9 1139 aa23.9■■□□□ 1.42
SMN2-216ENST00000638794 RGPD3A6NKT7 1758 aaPredicted RBP23.9■■□□□ 1.42
SMN2-216ENST00000638794 RGPD4Q7Z3J3 1758 aa23.9■■□□□ 1.42
SMN2-216ENST00000638794 CDCA7Q9BWT1 371 aaPredicted RBP23.89■■□□□ 1.41
SMN2-216ENST00000638794 HDGFL2Q7Z4V5 671 aaPredicted RBP23.88■■□□□ 1.41
SMN2-216ENST00000638794 EDC4Q6P2E9 1401 aaKnown RBP23.87■■□□□ 1.41
SMN2-216ENST00000638794 MARCH10Q8NA82 808 aaPredicted RBP23.87■■□□□ 1.41
SMN2-216ENST00000638794 A0A1W2PP64 1363 aa23.87■■□□□ 1.41
SMN2-216ENST00000638794 NBPF14Q5TI25 921 aa23.85■■□□□ 1.41
SMN2-216ENST00000638794 CCDC7Q96M83 1385 aa23.85■■□□□ 1.41
SMN2-216ENST00000638794 BCL9O00512 1426 aa23.84■■□□□ 1.41
SMN2-216ENST00000638794 PTF1AQ7RTS3 328 aa23.84■■□□□ 1.41
SMN2-216ENST00000638794 PUS7Q96PZ0 661 aaKnown RBP23.84■■□□□ 1.41
SMN2-216ENST00000638794 TERF2IPQ9NYB0 399 aa23.84■■□□□ 1.41
SMN2-216ENST00000638794 TESK2Q96S53 571 aa23.83■■□□□ 1.41
SMN2-216ENST00000638794 BCL11BQ9C0K0 894 aaPredicted RBP23.83■■□□□ 1.41
SMN2-216ENST00000638794 ERBB3P21860 1342 aa23.83■■□□□ 1.4
SMN2-216ENST00000638794 ST20-MTHFSA0A0A6YYL1 179 aa23.81■■□□□ 1.4
SMN2-216ENST00000638794 PLSCR1O15162 318 aa23.81■■□□□ 1.4
SMN2-216ENST00000638794 TNS2Q63HR2 1409 aa23.81■■□□□ 1.4
SMN2-216ENST00000638794 EXOC5O00471 708 aa23.8■■□□□ 1.4
SMN2-216ENST00000638794 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
SMN2-216ENST00000638794 NINLQ9Y2I6 1382 aa23.78■■□□□ 1.4
SMN2-216ENST00000638794 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
SMN2-216ENST00000638794 ANKRD24Q8TF21 1146 aa23.76■■□□□ 1.39
SMN2-216ENST00000638794 NHSQ6T4R5 1651 aa23.75■■□□□ 1.39
SMN2-216ENST00000638794 PROM2Q8N271 834 aa23.74■■□□□ 1.39
SMN2-216ENST00000638794 ANO8Q9HCE9 1232 aaPredicted RBP23.74■■□□□ 1.39
SMN2-216ENST00000638794 IL2RBP14784 551 aa23.73■■□□□ 1.39
SMN2-216ENST00000638794 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
SMN2-216ENST00000638794 FAM208AQ9UK61 1670 aaKnown RBP23.72■■□□□ 1.39
SMN2-216ENST00000638794 CASZ1Q86V15 1759 aa23.72■■□□□ 1.39
SMN2-216ENST00000638794 KCNQ2O43526 872 aa23.71■■□□□ 1.39
SMN2-216ENST00000638794 USP47Q96K76 1375 aa23.7■■□□□ 1.38
SMN2-216ENST00000638794 IP6K1Q92551 441 aa23.7■■□□□ 1.38
SMN2-216ENST00000638794 ANKRD36BQ8N2N9 1353 aa23.69■■□□□ 1.38
SMN2-216ENST00000638794 TXNRD1Q16881 649 aa23.69■■□□□ 1.38
SMN2-216ENST00000638794 COG3Q96JB2 828 aa23.69■■□□□ 1.38
SMN2-216ENST00000638794 SPON1Q9HCB6 807 aa23.69■■□□□ 1.38
SMN2-216ENST00000638794 ACSBG1Q96GR2 724 aa23.68■■□□□ 1.38
SMN2-216ENST00000638794 KAT6BQ8WYB5 2073 aa23.68■■□□□ 1.38
SMN2-216ENST00000638794 LTV1Q96GA3 475 aaPredicted RBP23.67■■□□□ 1.38
SMN2-216ENST00000638794 BTAF1O14981 1849 aa23.66■■□□□ 1.38
SMN2-216ENST00000638794 MAP3K19Q56UN5 1328 aa23.66■■□□□ 1.38
SMN2-216ENST00000638794 TMF1P82094 1093 aa23.66■■□□□ 1.38
SMN2-216ENST00000638794 RGPD2P0DJD1 1756 aa23.65■■□□□ 1.38
SMN2-216ENST00000638794 FBLN1P23142 703 aa23.65■■□□□ 1.38
SMN2-216ENST00000638794 PDGFDQ9GZP0 370 aaPredicted RBP23.65■■□□□ 1.38
SMN2-216ENST00000638794 PPP1R1BQ9UD71 204 aaPredicted RBP23.64■■□□□ 1.37
SMN2-216ENST00000638794 HOXC9P31274 260 aa23.63■■□□□ 1.37
SMN2-216ENST00000638794 AMPHP49418 695 aa23.62■■□□□ 1.37
SMN2-216ENST00000638794 STK32BQ9NY57 414 aa23.62■■□□□ 1.37
SMN2-216ENST00000638794 KIF20BQ96Q89 1820 aa23.61■■□□□ 1.37
SMN2-216ENST00000638794 PAPPAQ13219 1627 aa23.6■■□□□ 1.37
SMN2-216ENST00000638794 SLC15A2Q16348 729 aa23.6■■□□□ 1.37
SMN2-216ENST00000638794 SHANK3Q9BYB0 1731 aa23.59■■□□□ 1.37
SMN2-216ENST00000638794 FYB1O15117 783 aa23.59■■□□□ 1.37
SMN2-216ENST00000638794 ZBTB7AO95365 584 aa23.59■■□□□ 1.37
SMN2-216ENST00000638794 GGNBP2Q9H3C7 697 aa23.59■■□□□ 1.37
SMN2-216ENST00000638794 RTL1A6NKG5 1358 aa23.59■■□□□ 1.37
SMN2-216ENST00000638794 MYOM1P52179 1685 aa23.58■■□□□ 1.37
SMN2-216ENST00000638794 RRS1Q15050 365 aaKnown RBP23.58■■□□□ 1.37
SMN2-216ENST00000638794 DDX54Q8TDD1 881 aaKnown RBP23.58■■□□□ 1.37
SMN2-216ENST00000638794 MEGF6O75095 1541 aa23.56■■□□□ 1.36
SMN2-216ENST00000638794 CDCA8Q53HL2 280 aa23.56■■□□□ 1.36
SMN2-216ENST00000638794 DOT1LQ8TEK3 1739 aa23.56■■□□□ 1.36
SMN2-216ENST00000638794 ATF5Q9Y2D1 282 aaPredicted RBP23.54■■□□□ 1.36
SMN2-216ENST00000638794 PTGER2P43116 358 aa23.53■■□□□ 1.36
SMN2-216ENST00000638794 NBPF6Q5VWK0 638 aa23.51■■□□□ 1.35
SMN2-216ENST00000638794 NBPF4Q96M43 638 aa23.51■■□□□ 1.35
SMN2-216ENST00000638794 LRRC4BQ9NT99 713 aa23.51■■□□□ 1.35
SMN2-216ENST00000638794 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
SMN2-216ENST00000638794 SMG6Q86US8 1419 aaKnown RBP23.5■■□□□ 1.35
SMN2-216ENST00000638794 ZNF827Q17R98 1081 aa23.5■■□□□ 1.35
SMN2-216ENST00000638794 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
SMN2-216ENST00000638794 ZCRB1Q8TBF4 217 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms