RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 SPATA31A5Q5VU36 1347 aa17.37■□□□□ 0.37
CLN6-225ENST00000638144 SPATA31A7Q8IWB4 1347 aa17.37■□□□□ 0.37
CLN6-225ENST00000638144 EP400Q96L91 3159 aa17.36■□□□□ 0.37
CLN6-225ENST00000638144 FBLN1P23142 703 aa17.36■□□□□ 0.37
CLN6-225ENST00000638144 EVA1CP58658 441 aa17.36■□□□□ 0.37
CLN6-225ENST00000638144 AXIN2Q9Y2T1 843 aa17.36■□□□□ 0.37
CLN6-225ENST00000638144 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
CLN6-225ENST00000638144 COG3Q96JB2 828 aa17.35■□□□□ 0.37
CLN6-225ENST00000638144 KIF7Q2M1P5 1343 aa17.35■□□□□ 0.37
CLN6-225ENST00000638144 FYB1O15117 783 aa17.34■□□□□ 0.37
CLN6-225ENST00000638144 SPATA31A1Q5TZJ5 1347 aa17.34■□□□□ 0.37
CLN6-225ENST00000638144 SEPT12Q8IYM1 358 aa17.34■□□□□ 0.37
CLN6-225ENST00000638144 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.37
CLN6-225ENST00000638144 PANK3Q9H999 370 aa17.31■□□□□ 0.36
CLN6-225ENST00000638144 CRB1P82279 1406 aa17.3■□□□□ 0.36
CLN6-225ENST00000638144 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
CLN6-225ENST00000638144 CSB-PGBD3P0DP91 1061 aa17.29■□□□□ 0.36
CLN6-225ENST00000638144 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
CLN6-225ENST00000638144 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
CLN6-225ENST00000638144 ABCC6O95255 1503 aa17.29■□□□□ 0.36
CLN6-225ENST00000638144 ANKRD26Q9UPS8 1709 aa17.29■□□□□ 0.36
CLN6-225ENST00000638144 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
CLN6-225ENST00000638144 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
CLN6-225ENST00000638144 FAM182BQ5T319 152 aa17.28■□□□□ 0.36
CLN6-225ENST00000638144 UPF1Q92900 1129 aaKnown RBP eCLIP17.28■□□□□ 0.36
CLN6-225ENST00000638144 PEAK1Q9H792 1746 aa17.27■□□□□ 0.36
CLN6-225ENST00000638144 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
CLN6-225ENST00000638144 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
CLN6-225ENST00000638144 CCDC7Q96M83 1385 aa17.27■□□□□ 0.35
CLN6-225ENST00000638144 CGNL1Q0VF96 1302 aa17.26■□□□□ 0.35
CLN6-225ENST00000638144 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
CLN6-225ENST00000638144 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
CLN6-225ENST00000638144 WASHC2AQ641Q2 1341 aa17.25■□□□□ 0.35
CLN6-225ENST00000638144 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
CLN6-225ENST00000638144 ERBB3P21860 1342 aa17.24■□□□□ 0.35
CLN6-225ENST00000638144 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
CLN6-225ENST00000638144 AMPHP49418 695 aa17.24■□□□□ 0.35
CLN6-225ENST00000638144 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
CLN6-225ENST00000638144 LRRC37A3O60309 1634 aa17.24■□□□□ 0.35
CLN6-225ENST00000638144 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
CLN6-225ENST00000638144 HOXC9P31274 260 aa17.23■□□□□ 0.35
CLN6-225ENST00000638144 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
CLN6-225ENST00000638144 MAP2P11137 1827 aaKnown RBP17.23■□□□□ 0.35
CLN6-225ENST00000638144 IP6K1Q92551 441 aa17.22■□□□□ 0.35
CLN6-225ENST00000638144 NLRP2Q9NX02 1062 aa17.22■□□□□ 0.35
CLN6-225ENST00000638144 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
CLN6-225ENST00000638144 BLMP54132 1417 aaPredicted RBP17.21■□□□□ 0.35
CLN6-225ENST00000638144 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
CLN6-225ENST00000638144 RTL1A6NKG5 1358 aa17.2■□□□□ 0.34
CLN6-225ENST00000638144 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
CLN6-225ENST00000638144 CARD10Q9BWT7 1032 aa17.2■□□□□ 0.34
CLN6-225ENST00000638144 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
CLN6-225ENST00000638144 THRAP3Q9Y2W1 955 aaKnown RBP17.19■□□□□ 0.34
CLN6-225ENST00000638144 KNSTRNQ9Y448 316 aa17.19■□□□□ 0.34
CLN6-225ENST00000638144 HSP90AB2PQ58FF8 381 aa17.18■□□□□ 0.34
CLN6-225ENST00000638144 DISP2A7MBM2 1401 aa17.18■□□□□ 0.34
CLN6-225ENST00000638144 FLT4P35916 1363 aa17.16■□□□□ 0.34
CLN6-225ENST00000638144 PDE3BQ13370 1112 aa17.16■□□□□ 0.34
CLN6-225ENST00000638144 USHBP1Q8N6Y0 703 aa17.16■□□□□ 0.34
CLN6-225ENST00000638144 NSD2O96028 1365 aa17.15■□□□□ 0.34
CLN6-225ENST00000638144 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
CLN6-225ENST00000638144 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
CLN6-225ENST00000638144 DDB1Q16531 1140 aa17.14■□□□□ 0.33
CLN6-225ENST00000638144 CC2D1BQ5T0F9 858 aaKnown RBP17.14■□□□□ 0.33
CLN6-225ENST00000638144 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
CLN6-225ENST00000638144 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
CLN6-225ENST00000638144 INSRP06213 1382 aa17.14■□□□□ 0.33
CLN6-225ENST00000638144 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
CLN6-225ENST00000638144 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
CLN6-225ENST00000638144 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
CLN6-225ENST00000638144 NBPF6Q5VWK0 638 aa17.12■□□□□ 0.33
CLN6-225ENST00000638144 DEFB132Q7Z7B7 95 aa17.12■□□□□ 0.33
CLN6-225ENST00000638144 NBPF4Q96M43 638 aa17.12■□□□□ 0.33
CLN6-225ENST00000638144 TNS2Q63HR2 1409 aa17.12■□□□□ 0.33
CLN6-225ENST00000638144 MEGF6O75095 1541 aa17.11■□□□□ 0.33
CLN6-225ENST00000638144 IL2RBP14784 551 aa17.11■□□□□ 0.33
CLN6-225ENST00000638144 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
CLN6-225ENST00000638144 TRIM37O94972 964 aa17.1■□□□□ 0.33
CLN6-225ENST00000638144 CDCA7Q9BWT1 371 aaPredicted RBP17.1■□□□□ 0.33
CLN6-225ENST00000638144 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
CLN6-225ENST00000638144 OVOS2A0A0G2JMS6 1433 aa17.1■□□□□ 0.33
CLN6-225ENST00000638144 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
CLN6-225ENST00000638144 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
CLN6-225ENST00000638144 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
CLN6-225ENST00000638144 EXOC5O00471 708 aa17.08■□□□□ 0.32
CLN6-225ENST00000638144 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
CLN6-225ENST00000638144 KAT6BQ8WYB5 2073 aa17.06■□□□□ 0.32
CLN6-225ENST00000638144 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
CLN6-225ENST00000638144 PTF1AQ7RTS3 328 aa17.06■□□□□ 0.32
CLN6-225ENST00000638144 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
CLN6-225ENST00000638144 EYA1Q99502 592 aa17.04■□□□□ 0.32
CLN6-225ENST00000638144 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
CLN6-225ENST00000638144 EN1Q05925 392 aaPredicted RBP17.03■□□□□ 0.32
CLN6-225ENST00000638144 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
CLN6-225ENST00000638144 BAG6P46379 1132 aa17.02■□□□□ 0.32
CLN6-225ENST00000638144 RAPGEF4Q8WZA2 1011 aa17.02■□□□□ 0.32
CLN6-225ENST00000638144 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
CLN6-225ENST00000638144 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
CLN6-225ENST00000638144 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
CLN6-225ENST00000638144 APBA3O96018 575 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms