RNA–Protein interactions for RNA: ENST00000638049.1

LGI1-230, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,072 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-230ENST00000638049 USP17L3A6NCW0 530 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 USP17L4A6NCW7 530 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 USP17L5A8MUK1 530 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 SRPK2P78362 688 aaKnown RBP7.24□□□□□ -1.25
LGI1-230ENST00000638049 SPRYD7Q5W111 196 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 USP17L2Q6R6M4 530 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 USP17L1Q7RTZ2 530 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 TRMT44Q8IYL2 757 aaKnown RBP7.24□□□□□ -1.25
LGI1-230ENST00000638049 CCDC85AQ96PX6 553 aaPredicted RBP7.24□□□□□ -1.25
LGI1-230ENST00000638049 MCCD1P59942 119 aaPredicted RBP7.24□□□□□ -1.25
LGI1-230ENST00000638049 PLPP7Q8NBV4 271 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 MRGPRX2Q96LB1 330 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 PRKD2Q9BZL6 878 aa7.24□□□□□ -1.25
LGI1-230ENST00000638049 NCOA4Q13772 614 aa7.23□□□□□ -1.25
LGI1-230ENST00000638049 NBPF20Q3BBV1 942 aa7.23□□□□□ -1.25
LGI1-230ENST00000638049 VASH1Q7L8A9 365 aaPredicted RBP7.23□□□□□ -1.25
LGI1-230ENST00000638049 ZNF592Q92610 1267 aa7.23□□□□□ -1.25
LGI1-230ENST00000638049 PBXIP1Q96AQ6 731 aa7.23□□□□□ -1.25
LGI1-230ENST00000638049 KCTD15Q96SI1 283 aaPredicted RBP7.23□□□□□ -1.25
LGI1-230ENST00000638049 FOXC1Q12948 553 aa7.23□□□□□ -1.25
LGI1-230ENST00000638049 ZNF697Q5TEC3 545 aa7.23□□□□□ -1.25
LGI1-230ENST00000638049 NFATC2IPQ8NCF5 419 aa7.23□□□□□ -1.25
LGI1-230ENST00000638049 CDCA7Q9BWT1 371 aaPredicted RBP7.23□□□□□ -1.25
LGI1-230ENST00000638049 SIAH2O43255 324 aa7.22□□□□□ -1.25
LGI1-230ENST00000638049 ESPNB1AK53 854 aa7.21□□□□□ -1.25
LGI1-230ENST00000638049 KANK4Q5T7N3 995 aaPredicted RBP7.21□□□□□ -1.25
LGI1-230ENST00000638049 TRAF7Q6Q0C0 670 aa7.21□□□□□ -1.25
LGI1-230ENST00000638049 RETREG2Q8NC44 543 aa7.21□□□□□ -1.25
LGI1-230ENST00000638049 DOLKQ9UPQ8 538 aa7.21□□□□□ -1.25
LGI1-230ENST00000638049 WNT7AO00755 349 aa7.21□□□□□ -1.26
LGI1-230ENST00000638049 FSHRP23945 695 aa7.21□□□□□ -1.26
LGI1-230ENST00000638049 GRM5P41594 1212 aa7.21□□□□□ -1.26
LGI1-230ENST00000638049 OXLD1Q5BKU9 147 aa7.21□□□□□ -1.26
LGI1-230ENST00000638049 INTS6LQ5JSJ4 861 aaKnown RBP7.21□□□□□ -1.26
LGI1-230ENST00000638049 CHIC2Q9UKJ5 165 aa7.21□□□□□ -1.26
LGI1-230ENST00000638049 PPP1R15AO75807 674 aaPredicted RBP7.2□□□□□ -1.26
LGI1-230ENST00000638049 ZNF598Q86UK7 904 aaKnown RBP7.2□□□□□ -1.26
LGI1-230ENST00000638049 MKRN1Q9UHC7 482 aaKnown RBP7.2□□□□□ -1.26
LGI1-230ENST00000638049 PCDHB11Q9Y5F2 797 aa7.2□□□□□ -1.26
LGI1-230ENST00000638049 CARNS1A5YM72 827 aa7.2□□□□□ -1.26
LGI1-230ENST00000638049 PLEKHM2Q8IWE5 1019 aa7.2□□□□□ -1.26
LGI1-230ENST00000638049 CDK15Q96Q40 435 aa7.2□□□□□ -1.26
LGI1-230ENST00000638049 VRTNQ9H8Y1 702 aa7.2□□□□□ -1.26
LGI1-230ENST00000638049 PKD2L1Q9P0L9 805 aa7.2□□□□□ -1.26
LGI1-230ENST00000638049 CDV3Q9UKY7 258 aaKnown RBP7.2□□□□□ -1.26
LGI1-230ENST00000638049 ERVH48-1M5A8F1 160 aa7.19□□□□□ -1.26
LGI1-230ENST00000638049 MAP4K5Q9Y4K4 846 aa7.19□□□□□ -1.26
LGI1-230ENST00000638049 MAP7D1Q3KQU3 841 aa7.18□□□□□ -1.26
LGI1-230ENST00000638049 RNF20Q5VTR2 975 aa7.18□□□□□ -1.26
LGI1-230ENST00000638049 TMPRSS4Q9NRS4 437 aa7.18□□□□□ -1.26
LGI1-230ENST00000638049 ACIN1Q9UKV3 1341 aaKnown RBP7.18□□□□□ -1.26
LGI1-230ENST00000638049 TNFRSF10AO00220 468 aa7.18□□□□□ -1.26
LGI1-230ENST00000638049 SCTRP47872 440 aa7.18□□□□□ -1.26
LGI1-230ENST00000638049 EML3Q32P44 896 aa7.18□□□□□ -1.26
LGI1-230ENST00000638049 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
LGI1-230ENST00000638049 ADH1CP00326 375 aa7.17□□□□□ -1.26
LGI1-230ENST00000638049 ALDH1A1P00352 501 aa7.17□□□□□ -1.26
LGI1-230ENST00000638049 NR3C2P08235 984 aa7.17□□□□□ -1.26
LGI1-230ENST00000638049 SEPT12Q8IYM1 358 aa7.17□□□□□ -1.26
LGI1-230ENST00000638049 V9GY48 417 aaPredicted RBP7.17□□□□□ -1.26
LGI1-230ENST00000638049 RASA1P20936 1047 aa7.16□□□□□ -1.26
LGI1-230ENST00000638049 CLDN10P78369 228 aa7.16□□□□□ -1.26
LGI1-230ENST00000638049 ZNF594Q96JF6 807 aaPredicted RBP7.16□□□□□ -1.26
LGI1-230ENST00000638049 KIAA1024Q9UPX6 916 aa7.15□□□□□ -1.26
LGI1-230ENST00000638049 J3QL48 77 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 GDF9O60383 454 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 ATG7O95352 703 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 TRIM67Q6ZTA4 783 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 OGFOD1Q8N543 542 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 MPNDQ8N594 471 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 STK32AQ8WU08 396 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 CYLDQ9NQC7 956 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 ZMIZ1Q9ULJ6 1067 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 NOD1Q9Y239 953 aa7.15□□□□□ -1.27
LGI1-230ENST00000638049 USP17L15C9J2P7 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L10C9JJH3 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L13C9JLJ4 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L12C9JPN9 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L11C9JVI0 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L21D6R901 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L18D6R9N7 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L22D6RA61 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L17D6RBQ6 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L19D6RCP7 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L20D6RJB6 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 ATP5J2-PTCD1G3V325 749 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 USP17L24Q0WX57 530 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 PTK7Q13308 1070 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 PPP1R26Q5T8A7 1209 aaPredicted RBP7.14□□□□□ -1.27
LGI1-230ENST00000638049 CCDC116Q8IYX3 515 aa7.14□□□□□ -1.27
LGI1-230ENST00000638049 ZNF784Q8NCA9 323 aaPredicted RBP7.14□□□□□ -1.27
LGI1-230ENST00000638049 GTF2IP78347 998 aa7.13□□□□□ -1.27
LGI1-230ENST00000638049 NOVA2Q9UNW9 492 aaKnown RBP7.13□□□□□ -1.27
LGI1-230ENST00000638049 LZTS3O60299 673 aaPredicted RBP7.13□□□□□ -1.27
LGI1-230ENST00000638049 STAU1O95793 577 aaKnown RBP7.13□□□□□ -1.27
LGI1-230ENST00000638049 PDIA4P13667 645 aaKnown RBP7.13□□□□□ -1.27
LGI1-230ENST00000638049 USP4Q13107 963 aa7.13□□□□□ -1.27
LGI1-230ENST00000638049 NR5A1Q13285 461 aa7.13□□□□□ -1.27
LGI1-230ENST00000638049 NNTQ13423 1086 aa7.13□□□□□ -1.27
LGI1-230ENST00000638049 SNIP1Q8TAD8 396 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms