RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TERF2IPQ9NYB0 399 aa24.92■■□□□ 1.58
PNKP-230ENST00000638016 LTN1O94822 1766 aa24.9■■□□□ 1.58
PNKP-230ENST00000638016 OVOS2A0A0J9YW53 1432 aa24.9■■□□□ 1.58
PNKP-230ENST00000638016 OVOS2Q6IE36 1432 aa24.9■■□□□ 1.58
PNKP-230ENST00000638016 TIMELESSQ9UNS1 1208 aa24.9■■□□□ 1.58
PNKP-230ENST00000638016 TNS1Q9HBL0 1735 aaKnown RBP24.89■■□□□ 1.58
PNKP-230ENST00000638016 TOM1L2Q6ZVM7 507 aa24.89■■□□□ 1.58
PNKP-230ENST00000638016 PARP4Q9UKK3 1724 aaKnown RBP24.89■■□□□ 1.57
PNKP-230ENST00000638016 WNK3Q9BYP7 1800 aa24.89■■□□□ 1.57
PNKP-230ENST00000638016 TMF1P82094 1093 aa24.88■■□□□ 1.57
PNKP-230ENST00000638016 SF3B2Q13435 895 aaKnown RBP24.88■■□□□ 1.57
PNKP-230ENST00000638016 RGPD1P0DJD0 1748 aa24.88■■□□□ 1.57
PNKP-230ENST00000638016 NINLQ9Y2I6 1382 aa24.88■■□□□ 1.57
PNKP-230ENST00000638016 WDR17Q8IZU2 1322 aa24.87■■□□□ 1.57
PNKP-230ENST00000638016 LRRC37A3O60309 1634 aa24.87■■□□□ 1.57
PNKP-230ENST00000638016 ANKRD36BQ8N2N9 1353 aa24.85■■□□□ 1.57
PNKP-230ENST00000638016 THRAP3Q9Y2W1 955 aaKnown RBP24.85■■□□□ 1.57
PNKP-230ENST00000638016 MYOM1P52179 1685 aa24.85■■□□□ 1.57
PNKP-230ENST00000638016 CSB-PGBD3P0DP91 1061 aa24.84■■□□□ 1.57
PNKP-230ENST00000638016 TRIM37O94972 964 aa24.83■■□□□ 1.57
PNKP-230ENST00000638016 PDE3BQ13370 1112 aa24.83■■□□□ 1.57
PNKP-230ENST00000638016 ABCC6O95255 1503 aa24.82■■□□□ 1.56
PNKP-230ENST00000638016 FBLN1P23142 703 aa24.82■■□□□ 1.56
PNKP-230ENST00000638016 EN1Q05925 392 aaPredicted RBP24.82■■□□□ 1.56
PNKP-230ENST00000638016 SLC24A1O60721 1099 aa24.8■■□□□ 1.56
PNKP-230ENST00000638016 BAG6P46379 1132 aa24.8■■□□□ 1.56
PNKP-230ENST00000638016 FAM196AQ6ZSG2 479 aa24.8■■□□□ 1.56
PNKP-230ENST00000638016 PEAK1Q9H792 1746 aa24.79■■□□□ 1.56
PNKP-230ENST00000638016 SRCAPQ6ZRS2 3230 aa24.79■■□□□ 1.56
PNKP-230ENST00000638016 DISP2A7MBM2 1401 aa24.78■■□□□ 1.56
PNKP-230ENST00000638016 CARD10Q9BWT7 1032 aa24.78■■□□□ 1.56
PNKP-230ENST00000638016 GGNBP2Q9H3C7 697 aa24.77■■□□□ 1.56
PNKP-230ENST00000638016 ERBB3P21860 1342 aa24.77■■□□□ 1.56
PNKP-230ENST00000638016 COG3Q96JB2 828 aa24.76■■□□□ 1.55
PNKP-230ENST00000638016 EZH2Q15910 746 aaKnown RBP24.75■■□□□ 1.55
PNKP-230ENST00000638016 DDB1Q16531 1140 aa24.75■■□□□ 1.55
PNKP-230ENST00000638016 KIF20BQ96Q89 1820 aa24.75■■□□□ 1.55
PNKP-230ENST00000638016 FYB1O15117 783 aa24.74■■□□□ 1.55
PNKP-230ENST00000638016 ANKRD24Q8TF21 1146 aa24.74■■□□□ 1.55
PNKP-230ENST00000638016 MAP3K19Q56UN5 1328 aa24.73■■□□□ 1.55
PNKP-230ENST00000638016 CARD14Q9BXL6 1004 aa24.73■■□□□ 1.55
PNKP-230ENST00000638016 NLRP2Q9NX02 1062 aa24.73■■□□□ 1.55
PNKP-230ENST00000638016 SBF2Q86WG5 1849 aa24.72■■□□□ 1.55
PNKP-230ENST00000638016 OVOS2A0A0G2JMS6 1433 aa24.72■■□□□ 1.55
PNKP-230ENST00000638016 APBA3O96018 575 aa24.72■■□□□ 1.55
PNKP-230ENST00000638016 HSPA5P11021 654 aaKnown RBP24.72■■□□□ 1.55
PNKP-230ENST00000638016 CDCA8Q53HL2 280 aa24.72■■□□□ 1.55
PNKP-230ENST00000638016 CCDC7Q96M83 1385 aa24.71■■□□□ 1.55
PNKP-230ENST00000638016 PSDA5PKW4 1024 aaPredicted RBP24.71■■□□□ 1.55
PNKP-230ENST00000638016 PTF1AQ7RTS3 328 aa24.71■■□□□ 1.55
PNKP-230ENST00000638016 MARCH10Q8NA82 808 aaPredicted RBP24.71■■□□□ 1.55
PNKP-230ENST00000638016 LTV1Q96GA3 475 aaPredicted RBP24.71■■□□□ 1.55
PNKP-230ENST00000638016 POLR3GLQ9BT43 218 aa24.71■■□□□ 1.55
PNKP-230ENST00000638016 NSD3Q9BZ95 1437 aa24.7■■□□□ 1.55
PNKP-230ENST00000638016 RRS1Q15050 365 aaKnown RBP24.69■■□□□ 1.54
PNKP-230ENST00000638016 IP6K1Q92551 441 aa24.69■■□□□ 1.54
PNKP-230ENST00000638016 CAMKK2Q96RR4 588 aa24.69■■□□□ 1.54
PNKP-230ENST00000638016 RGPD2P0DJD1 1756 aa24.69■■□□□ 1.54
PNKP-230ENST00000638016 HOXC9P31274 260 aa24.67■■□□□ 1.54
PNKP-230ENST00000638016 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.54
PNKP-230ENST00000638016 CDCA7Q9BWT1 371 aaPredicted RBP24.67■■□□□ 1.54
PNKP-230ENST00000638016 TNS2Q63HR2 1409 aa24.67■■□□□ 1.54
PNKP-230ENST00000638016 RREB1Q92766 1687 aa24.66■■□□□ 1.54
PNKP-230ENST00000638016 NUP188Q5SRE5 1749 aa24.65■■□□□ 1.54
PNKP-230ENST00000638016 AMPHP49418 695 aa24.64■■□□□ 1.54
PNKP-230ENST00000638016 FAM208AQ9UK61 1670 aaKnown RBP24.63■■□□□ 1.53
PNKP-230ENST00000638016 EXOC5O00471 708 aa24.63■■□□□ 1.53
PNKP-230ENST00000638016 IL2RBP14784 551 aa24.62■■□□□ 1.53
PNKP-230ENST00000638016 R3HDM1Q15032 1099 aaKnown RBP24.61■■□□□ 1.53
PNKP-230ENST00000638016 C11orf95C9JLR9 678 aaPredicted RBP24.6■■□□□ 1.53
PNKP-230ENST00000638016 RTL1A6NKG5 1358 aa24.58■■□□□ 1.53
PNKP-230ENST00000638016 BCL9O00512 1426 aa24.58■■□□□ 1.53
PNKP-230ENST00000638016 PARD3Q8TEW0 1356 aa24.57■■□□□ 1.52
PNKP-230ENST00000638016 USHBP1Q8N6Y0 703 aa24.57■■□□□ 1.52
PNKP-230ENST00000638016 KCNQ2O43526 872 aa24.56■■□□□ 1.52
PNKP-230ENST00000638016 HSP90AB2PQ58FF8 381 aa24.56■■□□□ 1.52
PNKP-230ENST00000638016 ACSBG1Q96GR2 724 aa24.56■■□□□ 1.52
PNKP-230ENST00000638016 BCL11BQ9C0K0 894 aaPredicted RBP24.56■■□□□ 1.52
PNKP-230ENST00000638016 EMILIN1Q9Y6C2 1016 aa24.56■■□□□ 1.52
PNKP-230ENST00000638016 MEGF6O75095 1541 aa24.56■■□□□ 1.52
PNKP-230ENST00000638016 KAT6BQ8WYB5 2073 aa24.54■■□□□ 1.52
PNKP-230ENST00000638016 NHSQ6T4R5 1651 aa24.54■■□□□ 1.52
PNKP-230ENST00000638016 NBPF6Q5VWK0 638 aa24.54■■□□□ 1.52
PNKP-230ENST00000638016 NBPF4Q96M43 638 aa24.54■■□□□ 1.52
PNKP-230ENST00000638016 SHANK3Q9BYB0 1731 aa24.54■■□□□ 1.52
PNKP-230ENST00000638016 RGPD3A6NKT7 1758 aaPredicted RBP24.54■■□□□ 1.52
PNKP-230ENST00000638016 RGPD4Q7Z3J3 1758 aa24.54■■□□□ 1.52
PNKP-230ENST00000638016 CGNL1Q0VF96 1302 aa24.52■■□□□ 1.52
PNKP-230ENST00000638016 FLT4P35916 1363 aa24.52■■□□□ 1.52
PNKP-230ENST00000638016 PANK3Q9H999 370 aa24.51■■□□□ 1.51
PNKP-230ENST00000638016 ANKRD26Q9UPS8 1709 aa24.51■■□□□ 1.51
PNKP-230ENST00000638016 MAP2P11137 1827 aaKnown RBP24.51■■□□□ 1.51
PNKP-230ENST00000638016 LRP5O75197 1615 aa24.5■■□□□ 1.51
PNKP-230ENST00000638016 DDX54Q8TDD1 881 aaKnown RBP24.5■■□□□ 1.51
PNKP-230ENST00000638016 INSRP06213 1382 aa24.5■■□□□ 1.51
PNKP-230ENST00000638016 PLSCR1O15162 318 aa24.49■■□□□ 1.51
PNKP-230ENST00000638016 PROM2Q8N271 834 aa24.49■■□□□ 1.51
PNKP-230ENST00000638016 BTAF1O14981 1849 aa24.48■■□□□ 1.51
PNKP-230ENST00000638016 PPM1GO15355 546 aaPredicted RBP24.48■■□□□ 1.51
PNKP-230ENST00000638016 TNNT2P45379 298 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms