RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 AMPHP49418 695 aa30.35■■■□□ 2.45
CHRNA7-231ENST00000637786 CNGB1Q14028 1251 aaPredicted RBP30.35■■■□□ 2.45
CHRNA7-231ENST00000637786 AFF2P51816 1311 aa30.35■■■□□ 2.45
CHRNA7-231ENST00000637786 BLMP54132 1417 aaPredicted RBP30.35■■■□□ 2.45
CHRNA7-231ENST00000637786 NRAPQ86VF7 1730 aa30.35■■■□□ 2.45
CHRNA7-231ENST00000637786 PEAK1Q9H792 1746 aa30.35■■■□□ 2.45
CHRNA7-231ENST00000637786 RGPD5Q99666 1765 aa30.35■■■□□ 2.45
CHRNA7-231ENST00000637786 FLT4P35916 1363 aa30.34■■■□□ 2.45
CHRNA7-231ENST00000637786 BTG4Q9NY30 223 aa30.34■■■□□ 2.45
CHRNA7-231ENST00000637786 BCL9LQ86UU0 1499 aa30.33■■■□□ 2.45
CHRNA7-231ENST00000637786 EMILIN1Q9Y6C2 1016 aa30.33■■■□□ 2.45
CHRNA7-231ENST00000637786 HOXC9P31274 260 aa30.32■■■□□ 2.44
CHRNA7-231ENST00000637786 AXIN2Q9Y2T1 843 aa30.31■■■□□ 2.44
CHRNA7-231ENST00000637786 COL5A2P05997 1499 aaPredicted RBP30.31■■■□□ 2.44
CHRNA7-231ENST00000637786 CDK12Q9NYV4 1490 aaPredicted RBP30.31■■■□□ 2.44
CHRNA7-231ENST00000637786 UNC5CLQ8IV45 518 aa30.3■■■□□ 2.44
CHRNA7-231ENST00000637786 USP21Q9UK80 565 aa30.3■■■□□ 2.44
CHRNA7-231ENST00000637786 INSRP06213 1382 aa30.28■■■□□ 2.44
CHRNA7-231ENST00000637786 ZNF772Q68DY9 489 aaPredicted RBP30.28■■■□□ 2.44
CHRNA7-231ENST00000637786 PRKRIP1Q9H875 184 aaPredicted RBP30.28■■■□□ 2.44
CHRNA7-231ENST00000637786 PPP2R1AP30153 589 aa30.27■■■□□ 2.44
CHRNA7-231ENST00000637786 PPM1GO15355 546 aaPredicted RBP30.26■■■□□ 2.43
CHRNA7-231ENST00000637786 MTHFSP49914 203 aa30.26■■■□□ 2.43
CHRNA7-231ENST00000637786 PHF23Q9BUL5 403 aaPredicted RBP30.26■■■□□ 2.43
CHRNA7-231ENST00000637786 ERBB3P21860 1342 aa30.24■■■□□ 2.43
CHRNA7-231ENST00000637786 FAM208AQ9UK61 1670 aaKnown RBP30.24■■■□□ 2.43
CHRNA7-231ENST00000637786 EVA1CP58658 441 aa30.24■■■□□ 2.43
CHRNA7-231ENST00000637786 HSP90AB2PQ58FF8 381 aa30.23■■■□□ 2.43
CHRNA7-231ENST00000637786 WDR17Q8IZU2 1322 aa30.22■■■□□ 2.43
CHRNA7-231ENST00000637786 ATRNO75882 1429 aa30.22■■■□□ 2.43
CHRNA7-231ENST00000637786 ANP32CO43423 234 aa30.22■■■□□ 2.43
CHRNA7-231ENST00000637786 VPS72Q15906 364 aa30.22■■■□□ 2.43
CHRNA7-231ENST00000637786 MYBBP1AQ9BQG0 1328 aaKnown RBP30.22■■■□□ 2.43
CHRNA7-231ENST00000637786 ANKRD24Q8TF21 1146 aa30.21■■■□□ 2.43
CHRNA7-231ENST00000637786 STRN4Q9NRL3 753 aa30.21■■■□□ 2.43
CHRNA7-231ENST00000637786 RGS17Q9UGC6 210 aaPredicted RBP30.21■■■□□ 2.43
CHRNA7-231ENST00000637786 TRPC5Q9UL62 973 aaPredicted RBP30.21■■■□□ 2.43
CHRNA7-231ENST00000637786 CRB1P82279 1406 aa30.19■■■□□ 2.42
CHRNA7-231ENST00000637786 LARP1Q6PKG0 1096 aaKnown RBP30.17■■■□□ 2.42
CHRNA7-231ENST00000637786 QTRT2Q9H974 415 aaKnown RBP30.17■■■□□ 2.42
CHRNA7-231ENST00000637786 CSB-PGBD3P0DP91 1061 aa30.16■■■□□ 2.42
CHRNA7-231ENST00000637786 SPATA31A5Q5VU36 1347 aa30.16■■■□□ 2.42
CHRNA7-231ENST00000637786 SPATA31A7Q8IWB4 1347 aa30.16■■■□□ 2.42
CHRNA7-231ENST00000637786 COL3A1P02461 1466 aaPredicted RBP30.15■■■□□ 2.42
CHRNA7-231ENST00000637786 CFAP53Q96M91 514 aa30.15■■■□□ 2.42
CHRNA7-231ENST00000637786 TOM1L2Q6ZVM7 507 aa30.14■■■□□ 2.42
CHRNA7-231ENST00000637786 LTV1Q96GA3 475 aaPredicted RBP30.14■■■□□ 2.42
CHRNA7-231ENST00000637786 EIF4A2Q14240 407 aaKnown RBP30.13■■■□□ 2.41
CHRNA7-231ENST00000637786 GJD4Q96KN9 370 aaPredicted RBP30.13■■■□□ 2.41
CHRNA7-231ENST00000637786 CARD10Q9BWT7 1032 aa30.13■■■□□ 2.41
CHRNA7-231ENST00000637786 SPATA31A1Q5TZJ5 1347 aa30.13■■■□□ 2.41
CHRNA7-231ENST00000637786 DIEXFQ68CQ4 756 aaKnown RBP30.12■■■□□ 2.41
CHRNA7-231ENST00000637786 RGPD2P0DJD1 1756 aa30.12■■■□□ 2.41
CHRNA7-231ENST00000637786 GLI3P10071 1580 aa30.11■■■□□ 2.41
CHRNA7-231ENST00000637786 NLRP2Q9NX02 1062 aa30.1■■■□□ 2.41
CHRNA7-231ENST00000637786 THRAP3Q9Y2W1 955 aaKnown RBP30.1■■■□□ 2.41
CHRNA7-231ENST00000637786 CCDC9Q9Y3X0 531 aaKnown RBP30.1■■■□□ 2.41
CHRNA7-231ENST00000637786 DIAPH1O60610 1272 aaKnown RBP30.09■■■□□ 2.41
CHRNA7-231ENST00000637786 IL13P35225 146 aa30.09■■■□□ 2.41
CHRNA7-231ENST00000637786 RGPD1P0DJD0 1748 aa30.08■■■□□ 2.41
CHRNA7-231ENST00000637786 RBM6P78332 1123 aaKnown RBP30.08■■■□□ 2.41
CHRNA7-231ENST00000637786 POTEAQ6S8J7 498 aa30.08■■■□□ 2.41
CHRNA7-231ENST00000637786 NCAPD2Q15021 1401 aa30.07■■■□□ 2.4
CHRNA7-231ENST00000637786 TCP11L2Q8N4U5 519 aa30.07■■■□□ 2.4
CHRNA7-231ENST00000637786 NBPF6Q5VWK0 638 aa30.06■■■□□ 2.4
CHRNA7-231ENST00000637786 NBPF4Q96M43 638 aa30.06■■■□□ 2.4
CHRNA7-231ENST00000637786 BARGINQ6ZT62 677 aa30.05■■■□□ 2.4
CHRNA7-231ENST00000637786 WNK3Q9BYP7 1800 aa30.05■■■□□ 2.4
CHRNA7-231ENST00000637786 IGSF1Q8N6C5 1336 aa30.04■■■□□ 2.4
CHRNA7-231ENST00000637786 EYA1Q99502 592 aa30.04■■■□□ 2.4
CHRNA7-231ENST00000637786 RXRBP28702 533 aa30.03■■■□□ 2.4
CHRNA7-231ENST00000637786 USP35Q9P2H5 1018 aa30.03■■■□□ 2.4
CHRNA7-231ENST00000637786 ONECUT3O60422 494 aaPredicted RBP30.01■■■□□ 2.39
CHRNA7-231ENST00000637786 NUDCQ9Y266 331 aa30.01■■■□□ 2.39
CHRNA7-231ENST00000637786 CDCA7Q9BWT1 371 aaPredicted RBP30■■■□□ 2.39
CHRNA7-231ENST00000637786 THSD7AQ9UPZ6 1657 aa29.99■■■□□ 2.39
CHRNA7-231ENST00000637786 DISP2A7MBM2 1401 aa29.98■■■□□ 2.39
CHRNA7-231ENST00000637786 KDRP35968 1356 aa29.98■■■□□ 2.39
CHRNA7-231ENST00000637786 PLEKHG2Q9H7P9 1386 aa29.96■■■□□ 2.39
CHRNA7-231ENST00000637786 FAM98CQ17RN3 349 aaKnown RBP29.96■■■□□ 2.39
CHRNA7-231ENST00000637786 USHBP1Q8N6Y0 703 aa29.96■■■□□ 2.39
CHRNA7-231ENST00000637786 PARP4Q9UKK3 1724 aaKnown RBP29.96■■■□□ 2.39
CHRNA7-231ENST00000637786 IL2RBP14784 551 aa29.95■■■□□ 2.39
CHRNA7-231ENST00000637786 U2SURPO15042 1029 aaKnown RBP29.93■■■□□ 2.38
CHRNA7-231ENST00000637786 RAPGEF4Q8WZA2 1011 aa29.92■■■□□ 2.38
CHRNA7-231ENST00000637786 SULT6B1Q6IMI4 303 aa29.91■■■□□ 2.38
CHRNA7-231ENST00000637786 MEGF6O75095 1541 aa29.91■■■□□ 2.38
CHRNA7-231ENST00000637786 OVOS2A0A0G2JMS6 1433 aa29.9■■■□□ 2.38
CHRNA7-231ENST00000637786 LRRC37A3O60309 1634 aa29.89■■■□□ 2.38
CHRNA7-231ENST00000637786 RGS12O14924 1447 aa29.89■■■□□ 2.38
CHRNA7-231ENST00000637786 TATP17735 454 aaPredicted RBP29.89■■■□□ 2.38
CHRNA7-231ENST00000637786 AEBP1Q8IUX7 1158 aa29.89■■■□□ 2.38
CHRNA7-231ENST00000637786 SEPT12Q8IYM1 358 aa29.89■■■□□ 2.38
CHRNA7-231ENST00000637786 U2AF1L5P0DN76 240 aaPredicted RBP29.88■■■□□ 2.37
CHRNA7-231ENST00000637786 U2AF1Q01081 240 aaKnown RBP eCLIP29.88■■■□□ 2.37
CHRNA7-231ENST00000637786 MRS2Q9HD23 443 aa29.88■■■□□ 2.37
CHRNA7-231ENST00000637786 CCER2I3L3R5 266 aa29.87■■■□□ 2.37
CHRNA7-231ENST00000637786 CCDC184Q52MB2 194 aa29.87■■■□□ 2.37
CHRNA7-231ENST00000637786 PKD1L3Q7Z443 1732 aa29.86■■■□□ 2.37
CHRNA7-231ENST00000637786 A0A0G2JS52 829 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms