RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-229	ENST00000637552	APBA3	O96018	575 aa		32.22	■■■□□ 2.75
CHRNA7-229	ENST00000637552	CD163L1	Q9NR16	1453 aa		32.22	■■■□□ 2.75
CHRNA7-229	ENST00000637552	EZH2	Q15910	746 aa	Known RBP	32.21	■■■□□ 2.75
CHRNA7-229	ENST00000637552	RGPD5	Q99666	1765 aa		32.21	■■■□□ 2.75
CHRNA7-229	ENST00000637552	LRRC37A3	O60309	1634 aa		32.19	■■■□□ 2.74
CHRNA7-229	ENST00000637552	CSB-PGBD3	P0DP91	1061 aa		32.19	■■■□□ 2.74
CHRNA7-229	ENST00000637552	C11orf95	C9JLR9	678 aa	Predicted RBP	32.18	■■■□□ 2.74
CHRNA7-229	ENST00000637552	CAMKK2	Q96RR4	588 aa		32.18	■■■□□ 2.74
CHRNA7-229	ENST00000637552	SLC12A5	Q9H2X9	1139 aa		32.18	■■■□□ 2.74
CHRNA7-229	ENST00000637552	WNK3	Q9BYP7	1800 aa		32.18	■■■□□ 2.74
CHRNA7-229	ENST00000637552	USP31	Q70CQ4	1352 aa		32.18	■■■□□ 2.74
CHRNA7-229	ENST00000637552	PARD3	Q8TEW0	1356 aa		32.18	■■■□□ 2.74
CHRNA7-229	ENST00000637552	USP54	Q70EL1	1684 aa		32.18	■■■□□ 2.74
CHRNA7-229	ENST00000637552	DDB1	Q16531	1140 aa		32.17	■■■□□ 2.74
CHRNA7-229	ENST00000637552	TERF2IP	Q9NYB0	399 aa		32.17	■■■□□ 2.74
CHRNA7-229	ENST00000637552	OVOS2	A0A0G2JMS6	1433 aa		32.17	■■■□□ 2.74
CHRNA7-229	ENST00000637552	OVOS2	A0A0J9YW53	1432 aa		32.17	■■■□□ 2.74
CHRNA7-229	ENST00000637552	OVOS2	Q6IE36	1432 aa		32.17	■■■□□ 2.74
CHRNA7-229	ENST00000637552	ABCC6	O95255	1503 aa		32.16	■■■□□ 2.74
CHRNA7-229	ENST00000637552	NME9	Q86XW9	330 aa		32.16	■■■□□ 2.74
CHRNA7-229	ENST00000637552	PUS7	Q96PZ0	661 aa	Known RBP	32.16	■■■□□ 2.74
CHRNA7-229	ENST00000637552	EDC4	Q6P2E9	1401 aa	Known RBP	32.16	■■■□□ 2.74
CHRNA7-229	ENST00000637552	LRP5	O75197	1615 aa		32.15	■■■□□ 2.74
CHRNA7-229	ENST00000637552	ST20-MTHFS	A0A0A6YYL1	179 aa		32.14	■■■□□ 2.74
CHRNA7-229	ENST00000637552	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.14	■■■□□ 2.74
CHRNA7-229	ENST00000637552		A0A1W2PP64	1363 aa		32.13	■■■□□ 2.73
CHRNA7-229	ENST00000637552	R3HDM1	Q15032	1099 aa	Known RBP	32.13	■■■□□ 2.73
CHRNA7-229	ENST00000637552	CARD10	Q9BWT7	1032 aa		32.12	■■■□□ 2.73
CHRNA7-229	ENST00000637552	SLC24A1	O60721	1099 aa		32.11	■■■□□ 2.73
CHRNA7-229	ENST00000637552	TESK2	Q96S53	571 aa		32.11	■■■□□ 2.73
CHRNA7-229	ENST00000637552	PEAK1	Q9H792	1746 aa		32.11	■■■□□ 2.73
CHRNA7-229	ENST00000637552	NINL	Q9Y2I6	1382 aa		32.1	■■■□□ 2.73
CHRNA7-229	ENST00000637552	RREB1	Q92766	1687 aa		32.1	■■■□□ 2.73
CHRNA7-229	ENST00000637552	LTN1	O94822	1766 aa		32.09	■■■□□ 2.73
CHRNA7-229	ENST00000637552	CCDC7	Q96M83	1385 aa		32.07	■■■□□ 2.73
CHRNA7-229	ENST00000637552	NUP188	Q5SRE5	1749 aa		32.06	■■■□□ 2.72
CHRNA7-229	ENST00000637552	SBF2	Q86WG5	1849 aa		32.05	■■■□□ 2.72
CHRNA7-229	ENST00000637552	ERBB3	P21860	1342 aa		32.02	■■■□□ 2.72
CHRNA7-229	ENST00000637552	NBPF14	Q5TI25	921 aa		32.01	■■■□□ 2.71
CHRNA7-229	ENST00000637552	MARCH10	Q8NA82	808 aa	Predicted RBP	32.01	■■■□□ 2.71
CHRNA7-229	ENST00000637552	USP47	Q96K76	1375 aa		32.01	■■■□□ 2.71
CHRNA7-229	ENST00000637552	EXOC5	O00471	708 aa		32	■■■□□ 2.71
CHRNA7-229	ENST00000637552	NLRP2	Q9NX02	1062 aa		32	■■■□□ 2.71
CHRNA7-229	ENST00000637552	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.98	■■■□□ 2.71
CHRNA7-229	ENST00000637552	RGPD4	Q7Z3J3	1758 aa		31.98	■■■□□ 2.71
CHRNA7-229	ENST00000637552	TMF1	P82094	1093 aa		31.97	■■■□□ 2.71
CHRNA7-229	ENST00000637552	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.97	■■■□□ 2.71
CHRNA7-229	ENST00000637552	BCL9	O00512	1426 aa		31.97	■■■□□ 2.71
CHRNA7-229	ENST00000637552	TNS2	Q63HR2	1409 aa		31.97	■■■□□ 2.71
CHRNA7-229	ENST00000637552	ANKRD24	Q8TF21	1146 aa		31.96	■■■□□ 2.71
CHRNA7-229	ENST00000637552	ANKRD36B	Q8N2N9	1353 aa		31.94	■■■□□ 2.7
CHRNA7-229	ENST00000637552	COG3	Q96JB2	828 aa		31.94	■■■□□ 2.7
CHRNA7-229	ENST00000637552	PLSCR1	O15162	318 aa		31.93	■■■□□ 2.7
CHRNA7-229	ENST00000637552	IL2RB	P14784	551 aa		31.9	■■■□□ 2.7
CHRNA7-229	ENST00000637552	PTF1A	Q7RTS3	328 aa		31.9	■■■□□ 2.7
CHRNA7-229	ENST00000637552	IP6K1	Q92551	441 aa		31.89	■■■□□ 2.7
CHRNA7-229	ENST00000637552	CDCA8	Q53HL2	280 aa		31.88	■■■□□ 2.69
CHRNA7-229	ENST00000637552	TIMELESS	Q9UNS1	1208 aa		31.88	■■■□□ 2.69
CHRNA7-229	ENST00000637552	FAM208A	Q9UK61	1670 aa	Known RBP	31.88	■■■□□ 2.69
CHRNA7-229	ENST00000637552	PCGF6	Q9BYE7	350 aa		31.87	■■■□□ 2.69
CHRNA7-229	ENST00000637552	LTV1	Q96GA3	475 aa	Predicted RBP	31.86	■■■□□ 2.69
CHRNA7-229	ENST00000637552	CLSPN	Q9HAW4	1339 aa		31.85	■■■□□ 2.69
CHRNA7-229	ENST00000637552	MAP3K19	Q56UN5	1328 aa		31.84	■■■□□ 2.69
CHRNA7-229	ENST00000637552	AMPH	P49418	695 aa		31.83	■■■□□ 2.69
CHRNA7-229	ENST00000637552	NHS	Q6T4R5	1651 aa		31.83	■■■□□ 2.69
CHRNA7-229	ENST00000637552	HOXC9	P31274	260 aa		31.8	■■■□□ 2.68
CHRNA7-229	ENST00000637552	ACSBG1	Q96GR2	724 aa		31.79	■■■□□ 2.68
CHRNA7-229	ENST00000637552	GGNBP2	Q9H3C7	697 aa		31.79	■■■□□ 2.68
CHRNA7-229	ENST00000637552	KCNQ2	O43526	872 aa		31.78	■■■□□ 2.68
CHRNA7-229	ENST00000637552	FBLN1	P23142	703 aa		31.78	■■■□□ 2.68
CHRNA7-229	ENST00000637552	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.78	■■■□□ 2.68
CHRNA7-229	ENST00000637552	KAT6B	Q8WYB5	2073 aa		31.78	■■■□□ 2.68
CHRNA7-229	ENST00000637552	KIF20B	Q96Q89	1820 aa		31.77	■■■□□ 2.68
CHRNA7-229	ENST00000637552	FYB1	O15117	783 aa		31.77	■■■□□ 2.68
CHRNA7-229	ENST00000637552	RTL1	A6NKG5	1358 aa		31.77	■■■□□ 2.68
CHRNA7-229	ENST00000637552	TXNRD1	Q16881	649 aa		31.76	■■■□□ 2.67
CHRNA7-229	ENST00000637552	PROM2	Q8N271	834 aa		31.76	■■■□□ 2.67
CHRNA7-229	ENST00000637552	SPON1	Q9HCB6	807 aa		31.75	■■■□□ 2.67
CHRNA7-229	ENST00000637552	RRS1	Q15050	365 aa	Known RBP	31.74	■■■□□ 2.67
CHRNA7-229	ENST00000637552	MYOM1	P52179	1685 aa		31.73	■■■□□ 2.67
CHRNA7-229	ENST00000637552	RGPD2	P0DJD1	1756 aa		31.71	■■■□□ 2.67
CHRNA7-229	ENST00000637552	DDX54	Q8TDD1	881 aa	Known RBP	31.71	■■■□□ 2.67
CHRNA7-229	ENST00000637552	STK32B	Q9NY57	414 aa		31.71	■■■□□ 2.67
CHRNA7-229	ENST00000637552	BTAF1	O14981	1849 aa		31.7	■■■□□ 2.67
CHRNA7-229	ENST00000637552	SMG6	Q86US8	1419 aa	Known RBP	31.7	■■■□□ 2.67
CHRNA7-229	ENST00000637552	PPP1R1B	Q9UD71	204 aa	Predicted RBP	31.7	■■■□□ 2.67
CHRNA7-229	ENST00000637552	CASZ1	Q86V15	1759 aa		31.68	■■■□□ 2.66
CHRNA7-229	ENST00000637552	NSD3	Q9BZ95	1437 aa		31.67	■■■□□ 2.66
CHRNA7-229	ENST00000637552	SLC15A2	Q16348	729 aa		31.64	■■■□□ 2.66
CHRNA7-229	ENST00000637552	MEGF6	O75095	1541 aa		31.64	■■■□□ 2.66
CHRNA7-229	ENST00000637552	CARD14	Q9BXL6	1004 aa		31.63	■■■□□ 2.65
CHRNA7-229	ENST00000637552	FLT4	P35916	1363 aa		31.62	■■■□□ 2.65
CHRNA7-229	ENST00000637552	NBPF6	Q5VWK0	638 aa		31.62	■■■□□ 2.65
CHRNA7-229	ENST00000637552	ZCRB1	Q8TBF4	217 aa	Known RBP	31.62	■■■□□ 2.65
CHRNA7-229	ENST00000637552	NBPF4	Q96M43	638 aa		31.62	■■■□□ 2.65
CHRNA7-229	ENST00000637552	INSR	P06213	1382 aa		31.61	■■■□□ 2.65
CHRNA7-229	ENST00000637552	KIF24	Q5T7B8	1368 aa		31.61	■■■□□ 2.65
CHRNA7-229	ENST00000637552	USHBP1	Q8N6Y0	703 aa		31.6	■■■□□ 2.65
CHRNA7-229	ENST00000637552	CCER1	Q8TC90	406 aa	Predicted RBP	31.6	■■■□□ 2.65
CHRNA7-229	ENST00000637552	POLR3GL	Q9BT43	218 aa		31.6	■■■□□ 2.65

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