RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 ZNHIT6Q9NWK9 470 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 CDK13Q14004 1512 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 SETSIPP0DME0 302 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 FAM193AP78312 1265 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 PDCP20941 246 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 NBPF8Q3BBV2 869 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 POLR3GO15318 223 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 SAFBQ15424 915 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 IVLP07476 585 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 VPS53Q5VIR6 699 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 DHX37Q8IY37 1157 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 ADAMTS8Q9UP79 889 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 GBP2P32456 591 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 CFAP70Q5T0N1 1121 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 TAX1BP1Q86VP1 789 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 RPGRIP1LQ68CZ1 1315 aa11.48□□□□□ -0.57
CACNA1A-242ENST00000637485 HMGB1P09429 215 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 PRIMPOLQ96LW4 560 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 BMS1Q14692 1282 aaKnown RBP11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 ERBINQ96RT1 1412 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 CCDC91Q7Z6B0 441 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 KIF18AQ8NI77 898 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 BACH2Q9BYV9 841 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 CCDC141Q6ZP82 1450 aa11.47□□□□□ -0.57
CACNA1A-242ENST00000637485 IBSPP21815 317 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-242ENST00000637485 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-242ENST00000637485 TMCO5BA8MYB1 307 aa11.46□□□□□ -0.57
CACNA1A-242ENST00000637485 PTPN14Q15678 1187 aa11.46□□□□□ -0.57
CACNA1A-242ENST00000637485 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
CACNA1A-242ENST00000637485 MAGI1Q96QZ7 1491 aaPredicted RBP11.46□□□□□ -0.58
CACNA1A-242ENST00000637485 SERPINC1P01008 464 aa11.46□□□□□ -0.58
CACNA1A-242ENST00000637485 CPSF2Q9P2I0 782 aaKnown RBP11.46□□□□□ -0.58
CACNA1A-242ENST00000637485 EPS15P42566 896 aa11.46□□□□□ -0.58
CACNA1A-242ENST00000637485 RNF187Q5TA31 235 aaPredicted RBP11.46□□□□□ -0.58
CACNA1A-242ENST00000637485 KRT222Q8N1A0 295 aa11.46□□□□□ -0.58
CACNA1A-242ENST00000637485 CAMSAP2Q08AD1 1489 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 DDX58O95786 925 aaKnown RBP11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 TTC5Q8N0Z6 440 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 GGNBP2Q9H3C7 697 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 KIF14Q15058 1648 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 ANKRD30BQ9BXX2 1392 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 CLCN1P35523 988 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 NINLQ9Y2I6 1382 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 ANKRD62A6NC57 917 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 MTHFSP49914 203 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 PSME1Q06323 249 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 SLC52A1Q9NWF4 448 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
CACNA1A-242ENST00000637485 SARNPP82979 210 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 CFAP45Q9UL16 551 aa11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 MAGEC2Q9UBF1 373 aaPredicted RBP11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 CCAR1Q8IX12 1150 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 WDR66Q8TBY9 1149 aa11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 TNMDQ9H2S6 317 aa11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 TXLNAP40222 546 aa11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 CCDC148Q8NFR7 591 aa11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 ZNF396Q96N95 335 aaPredicted RBP11.44□□□□□ -0.58
CACNA1A-242ENST00000637485 PSMA5P28066 241 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 HSP90AB4PQ58FF6 505 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 C9orf78Q9NZ63 289 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 TRDNQ13061 729 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 CCDC9Q9Y3X0 531 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 SMG6Q86US8 1419 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 WDR33Q9C0J8 1336 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 JAKMIP3Q5VZ66 844 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 TCP11L2Q8N4U5 519 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 SMARCC1Q92922 1105 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 FMNL2Q96PY5 1086 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 TSPYL4Q9UJ04 414 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
CACNA1A-242ENST00000637485 ZSCAN12O43309 604 aa11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 AKNAQ7Z591 1439 aa11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 ZNF526Q8TF50 670 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 LMAN1P49257 510 aa11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 SEPT6Q14141 434 aa11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 TTC31Q49AM3 519 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 ABCC5O15440 1437 aa11.42□□□□□ -0.58
CACNA1A-242ENST00000637485 FIBPO43427 364 aa11.41□□□□□ -0.58
CACNA1A-242ENST00000637485 FKBP5Q13451 457 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-242ENST00000637485 ZFYVE27Q5T4F4 411 aa11.41□□□□□ -0.58
CACNA1A-242ENST00000637485 GIGYF2Q6Y7W6 1299 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-242ENST00000637485 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-242ENST00000637485 LRRFIP2Q9Y608 721 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-242ENST00000637485 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-242ENST00000637485 SMC1AQ14683 1233 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms