RNA–Protein interactions for RNA: ENST00000637328.1

LINC01548-202, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 1 (best)

Gene LINC01548, Length 454 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-202ENST00000637328 CAMKK2Q96RR4 588 aa15.77■□□□□ 0.12
LINC01548-202ENST00000637328 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.12
LINC01548-202ENST00000637328 SPON1Q9HCB6 807 aa15.76■□□□□ 0.11
LINC01548-202ENST00000637328 CAMTA1Q9Y6Y1 1673 aa15.76■□□□□ 0.11
LINC01548-202ENST00000637328 A0A0G2JS52 829 aa15.75■□□□□ 0.11
LINC01548-202ENST00000637328 MYT1Q01538 1121 aa15.75■□□□□ 0.11
LINC01548-202ENST00000637328 XPCQ01831 940 aaPredicted RBP15.75■□□□□ 0.11
LINC01548-202ENST00000637328 KRT28Q7Z3Y7 464 aa15.75■□□□□ 0.11
LINC01548-202ENST00000637328 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
LINC01548-202ENST00000637328 FAM182BQ5T319 152 aa15.74■□□□□ 0.11
LINC01548-202ENST00000637328 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
LINC01548-202ENST00000637328 KIF20BQ96Q89 1820 aa15.73■□□□□ 0.11
LINC01548-202ENST00000637328 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
LINC01548-202ENST00000637328 KIF1AQ12756 1690 aa15.73■□□□□ 0.11
LINC01548-202ENST00000637328 TNS1Q9HBL0 1735 aaKnown RBP15.72■□□□□ 0.11
LINC01548-202ENST00000637328 KCNQ2O43526 872 aa15.72■□□□□ 0.11
LINC01548-202ENST00000637328 NLRP6P59044 892 aa15.72■□□□□ 0.11
LINC01548-202ENST00000637328 FAM98CQ17RN3 349 aaKnown RBP15.72■□□□□ 0.11
LINC01548-202ENST00000637328 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
LINC01548-202ENST00000637328 ABTB2Q8N961 1025 aa15.72■□□□□ 0.11
LINC01548-202ENST00000637328 FBLN1P23142 703 aa15.71■□□□□ 0.11
LINC01548-202ENST00000637328 MTHFSP49914 203 aa15.71■□□□□ 0.11
LINC01548-202ENST00000637328 PNISRQ8TF01 805 aaKnown RBP15.71■□□□□ 0.11
LINC01548-202ENST00000637328 USP31Q70CQ4 1352 aa15.71■□□□□ 0.11
LINC01548-202ENST00000637328 ANKRD26Q9UPS8 1709 aa15.7■□□□□ 0.1
LINC01548-202ENST00000637328 OVOS2A0A0J9YW53 1432 aa15.69■□□□□ 0.1
LINC01548-202ENST00000637328 OVOS2Q6IE36 1432 aa15.69■□□□□ 0.1
LINC01548-202ENST00000637328 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
LINC01548-202ENST00000637328 CFAP53Q96M91 514 aa15.68■□□□□ 0.1
LINC01548-202ENST00000637328 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
LINC01548-202ENST00000637328 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
LINC01548-202ENST00000637328 SOX12O15370 315 aa15.67■□□□□ 0.1
LINC01548-202ENST00000637328 NBPF14Q5TI25 921 aa15.67■□□□□ 0.1
LINC01548-202ENST00000637328 POLKQ9UBT6 870 aa15.67■□□□□ 0.1
LINC01548-202ENST00000637328 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
LINC01548-202ENST00000637328 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
LINC01548-202ENST00000637328 AATKQ6ZMQ8 1374 aa15.66■□□□□ 0.1
LINC01548-202ENST00000637328 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
LINC01548-202ENST00000637328 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
LINC01548-202ENST00000637328 PLCH1Q4KWH8 1693 aa15.66■□□□□ 0.1
LINC01548-202ENST00000637328 TRIM37O94972 964 aa15.65■□□□□ 0.1
LINC01548-202ENST00000637328 APBA3O96018 575 aa15.65■□□□□ 0.1
LINC01548-202ENST00000637328 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
LINC01548-202ENST00000637328 GOLGB1Q14789 3259 aaKnown RBP15.65■□□□□ 0.1
LINC01548-202ENST00000637328 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
LINC01548-202ENST00000637328 PLEKHG5O94827 1062 aa15.64■□□□□ 0.09
LINC01548-202ENST00000637328 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
LINC01548-202ENST00000637328 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC01548-202ENST00000637328 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
LINC01548-202ENST00000637328 FAM83GA6ND36 823 aa15.62■□□□□ 0.09
LINC01548-202ENST00000637328 CABLES1Q8TDN4 633 aa15.62■□□□□ 0.09
LINC01548-202ENST00000637328 RREB1Q92766 1687 aa15.62■□□□□ 0.09
LINC01548-202ENST00000637328 NUP188Q5SRE5 1749 aa15.62■□□□□ 0.09
LINC01548-202ENST00000637328 TNS3Q68CZ2 1445 aa15.61■□□□□ 0.09
LINC01548-202ENST00000637328 ADAMTS8Q9UP79 889 aa15.61■□□□□ 0.09
LINC01548-202ENST00000637328 MAP3K19Q56UN5 1328 aa15.61■□□□□ 0.09
LINC01548-202ENST00000637328 CHD4Q14839 1912 aa15.6■□□□□ 0.09
LINC01548-202ENST00000637328 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
LINC01548-202ENST00000637328 FAM196AQ6ZSG2 479 aa15.6■□□□□ 0.09
LINC01548-202ENST00000637328 KCNH5Q8NCM2 988 aa15.6■□□□□ 0.09
LINC01548-202ENST00000637328 INSRP06213 1382 aa15.6■□□□□ 0.09
LINC01548-202ENST00000637328 DIAPH1O60610 1272 aaKnown RBP15.59■□□□□ 0.09
LINC01548-202ENST00000637328 GCP02774 474 aa15.59■□□□□ 0.09
LINC01548-202ENST00000637328 HNRNPUQ00839 825 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01548-202ENST00000637328 NUDCQ9Y266 331 aa15.59■□□□□ 0.09
LINC01548-202ENST00000637328 USP54Q70EL1 1684 aa15.59■□□□□ 0.09
LINC01548-202ENST00000637328 USP19O94966 1318 aa15.59■□□□□ 0.09
LINC01548-202ENST00000637328 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
LINC01548-202ENST00000637328 AMPHP49418 695 aa15.58■□□□□ 0.08
LINC01548-202ENST00000637328 COL3A1P02461 1466 aaPredicted RBP15.58■□□□□ 0.08
LINC01548-202ENST00000637328 ALS2Q96Q42 1657 aa15.57■□□□□ 0.08
LINC01548-202ENST00000637328 ZBTB7CA1YPR0 619 aa15.57■□□□□ 0.08
LINC01548-202ENST00000637328 U2SURPO15042 1029 aaKnown RBP15.57■□□□□ 0.08
LINC01548-202ENST00000637328 THSD7AQ9UPZ6 1657 aa15.57■□□□□ 0.08
LINC01548-202ENST00000637328 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
LINC01548-202ENST00000637328 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC01548-202ENST00000637328 HSP90AB2PQ58FF8 381 aa15.56■□□□□ 0.08
LINC01548-202ENST00000637328 BTG4Q9NY30 223 aa15.56■□□□□ 0.08
LINC01548-202ENST00000637328 SPATA31A5Q5VU36 1347 aa15.56■□□□□ 0.08
LINC01548-202ENST00000637328 SPATA31A7Q8IWB4 1347 aa15.56■□□□□ 0.08
LINC01548-202ENST00000637328 SLIT3O75094 1523 aa15.56■□□□□ 0.08
LINC01548-202ENST00000637328 NRAPQ86VF7 1730 aa15.56■□□□□ 0.08
LINC01548-202ENST00000637328 MAP2P11137 1827 aaKnown RBP15.55■□□□□ 0.08
LINC01548-202ENST00000637328 NFAT5O94916 1531 aa15.55■□□□□ 0.08
LINC01548-202ENST00000637328 IL13P35225 146 aa15.55■□□□□ 0.08
LINC01548-202ENST00000637328 FLT4P35916 1363 aa15.54■□□□□ 0.08
LINC01548-202ENST00000637328 HOXC9P31274 260 aa15.54■□□□□ 0.08
LINC01548-202ENST00000637328 ARHGEF25Q86VW2 580 aa15.54■□□□□ 0.08
LINC01548-202ENST00000637328 ZC3H6P61129 1189 aaKnown RBP15.53■□□□□ 0.08
LINC01548-202ENST00000637328 EIF4A2Q14240 407 aaKnown RBP15.53■□□□□ 0.08
LINC01548-202ENST00000637328 CCDC146Q8IYE0 955 aa15.53■□□□□ 0.08
LINC01548-202ENST00000637328 IP6K1Q92551 441 aa15.53■□□□□ 0.08
LINC01548-202ENST00000637328 SYT17Q9BSW7 474 aa15.53■□□□□ 0.08
LINC01548-202ENST00000637328 PEAK1Q9H792 1746 aa15.53■□□□□ 0.08
LINC01548-202ENST00000637328 KIF24Q5T7B8 1368 aa15.52■□□□□ 0.08
LINC01548-202ENST00000637328 PTGER2P43116 358 aa15.52■□□□□ 0.08
LINC01548-202ENST00000637328 FHDC1Q9C0D6 1143 aaPredicted RBP15.52■□□□□ 0.08
LINC01548-202ENST00000637328 RTL1A6NKG5 1358 aa15.51■□□□□ 0.07
LINC01548-202ENST00000637328 ABCA3Q99758 1704 aa15.51■□□□□ 0.07
LINC01548-202ENST00000637328 KCNA4P22459 653 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms