RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 PCDHB15Q9Y5E8 787 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 G3V3G9 751 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 DNAJC6O75061 913 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 STK10O94804 968 aaKnown RBP3.47□□□□□ -1.85
GABRB3-223ENST00000637293 SKIP12755 728 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 ZNF76P36508 570 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 CTDSPL2Q05D32 466 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 FAM69CQ0P6D2 419 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 PTK7Q13308 1070 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 BIRC2Q13490 618 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 FILIP1Q7Z7B0 1213 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 ILDR1Q86SU0 546 aaPredicted RBP3.47□□□□□ -1.85
GABRB3-223ENST00000637293 CCDC146Q8IYE0 955 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 CABLES1Q8TDN4 633 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 IRF2BPLQ9H1B7 796 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 SLKQ9H2G2 1235 aaPredicted RBP3.47□□□□□ -1.85
GABRB3-223ENST00000637293 PIF1Q9H611 641 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 SPC25Q9HBM1 224 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 PCDH12Q9NPG4 1184 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 PRKAB1Q9Y478 270 aa3.47□□□□□ -1.85
GABRB3-223ENST00000637293 KIF3CO14782 793 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 HOXA2O43364 376 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 SORBS3O60504 671 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 XRCC5P13010 732 aaKnown RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 NDUFV2P19404 249 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 FKBP4Q02790 459 aaKnown RBP eCLIP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 NR1H3Q13133 447 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 FAM50AQ14320 339 aaKnown RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 PLEKHG6Q3KR16 790 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 CRTC2Q53ET0 693 aaPredicted RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 TYW1BQ6NUM6 668 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 PADI6Q6TGC4 694 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 TSHZ1Q6ZSZ6 1077 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 SLF2Q8IX21 1173 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 SLAIN1Q8ND83 568 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 PNISRQ8TF01 805 aaKnown RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 TSC1Q92574 1164 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 PMM1Q92871 262 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 RBM33Q96EV2 1170 aaKnown RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 NAP1L5Q96NT1 182 aaPredicted RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 ANO8Q9HCE9 1232 aaPredicted RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 IFT57Q9NWB7 429 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 INPP5FQ9Y2H2 1132 aa3.46□□□□□ -1.86
GABRB3-223ENST00000637293 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 RBM19Q9Y4C8 960 aaKnown RBP3.46□□□□□ -1.86
GABRB3-223ENST00000637293 DDX11L8A8MPP1 907 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 ENPP3O14638 875 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 PRC1O43663 620 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 PRPF40AO75400 957 aaKnown RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 HSP90AA1P07900 732 aaKnown RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 FDX1P10109 184 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 ATP1A2P50993 1020 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 FANCCQ00597 558 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 ZNF211Q13398 564 aaPredicted RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 OS9Q13438 667 aaPredicted RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 MTMR2Q13614 643 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 BMS1Q14692 1282 aaKnown RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 ZFYVE27Q5T4F4 411 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 NBPF6Q5VWK0 638 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 PPP1R18Q6NYC8 613 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 TAS1R3Q7RTX0 852 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 TRIM50Q86XT4 487 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 TMTC2Q8N394 836 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 PRPF38AQ8NAV1 312 aaKnown RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 NBPF4Q96M43 638 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 FRMD6Q96NE9 622 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 TYW1Q9NV66 732 aaKnown RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 DDX56Q9NY93 547 aaKnown RBP3.45□□□□□ -1.86
GABRB3-223ENST00000637293 SLAIN2Q9P270 581 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 VTI1BQ9UEU0 232 aa3.45□□□□□ -1.86
GABRB3-223ENST00000637293 PPP1R3GB7ZBB8 358 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 FMNL1O95466 1100 aaPredicted RBP3.44□□□□□ -1.86
GABRB3-223ENST00000637293 P4HBP07237 508 aaKnown RBP3.44□□□□□ -1.86
GABRB3-223ENST00000637293 TBX4P57082 545 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 ATP2B2Q01814 1243 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 DPYDQ12882 1025 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 PSMD2Q13200 908 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 PDE3BQ13370 1112 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 SLFNL1Q499Z3 407 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 LDLRAD1Q5T700 205 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 WDR78Q5VTH9 848 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 CCSAPQ6IQ19 270 aaPredicted RBP3.44□□□□□ -1.86
GABRB3-223ENST00000637293 TMC4Q7Z404 712 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 JAZF1Q86VZ6 243 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 CKAP2LQ8IYA6 745 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 ZNF654Q8IZM8 581 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 NME8Q8N427 588 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 LRRN4Q8WUT4 740 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 RELTQ969Z4 430 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 CITED4Q96RK1 184 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 CEP89Q96ST8 783 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 RBCK1Q9BYM8 510 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 MAF1Q9H063 256 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 ACBD3Q9H3P7 528 aa3.44□□□□□ -1.86
GABRB3-223ENST00000637293 BSDC1Q9NW68 430 aaPredicted RBP3.44□□□□□ -1.86
GABRB3-223ENST00000637293 CXXC1Q9P0U4 656 aaPredicted RBP3.44□□□□□ -1.86
GABRB3-223ENST00000637293 MRPL42Q9Y6G3 142 aaKnown RBP3.44□□□□□ -1.86
GABRB3-223ENST00000637293 ZBBXA8MT70 800 aa3.43□□□□□ -1.86
GABRB3-223ENST00000637293 K7ELQ4 463 aaPredicted RBP3.43□□□□□ -1.86
GABRB3-223ENST00000637293 PIK3CDO00329 1044 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms