RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 WASLO00401 505 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-236ENST00000637117 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
CACNA1A-236ENST00000637117 PRR36Q9H6K5 1346 aa13.54□□□□□ -0.24
CACNA1A-236ENST00000637117 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
CACNA1A-236ENST00000637117 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
CACNA1A-236ENST00000637117 COL14A1Q05707 1796 aaKnown RBP13.53□□□□□ -0.24
CACNA1A-236ENST00000637117 FAM196AQ6ZSG2 479 aa13.53□□□□□ -0.24
CACNA1A-236ENST00000637117 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
CACNA1A-236ENST00000637117 TRIM37O94972 964 aa13.52□□□□□ -0.25
CACNA1A-236ENST00000637117 SPATA31A1Q5TZJ5 1347 aa13.52□□□□□ -0.25
CACNA1A-236ENST00000637117 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-236ENST00000637117 DISP2A7MBM2 1401 aa13.52□□□□□ -0.25
CACNA1A-236ENST00000637117 TRPM3Q9HCF6 1732 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-236ENST00000637117 RGPD1P0DJD0 1748 aa13.51□□□□□ -0.25
CACNA1A-236ENST00000637117 APBA3O96018 575 aa13.51□□□□□ -0.25
CACNA1A-236ENST00000637117 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-236ENST00000637117 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
CACNA1A-236ENST00000637117 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
CACNA1A-236ENST00000637117 ALS2Q96Q42 1657 aa13.5□□□□□ -0.25
CACNA1A-236ENST00000637117 PCDHB8Q9UN66 801 aa13.5□□□□□ -0.25
CACNA1A-236ENST00000637117 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
CACNA1A-236ENST00000637117 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
CACNA1A-236ENST00000637117 ADGRB2O60241 1585 aa13.49□□□□□ -0.25
CACNA1A-236ENST00000637117 EVA1CP58658 441 aa13.49□□□□□ -0.25
CACNA1A-236ENST00000637117 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-236ENST00000637117 KIAA0232Q92628 1395 aa13.48□□□□□ -0.25
CACNA1A-236ENST00000637117 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
CACNA1A-236ENST00000637117 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
CACNA1A-236ENST00000637117 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-236ENST00000637117 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
CACNA1A-236ENST00000637117 ADGRB1O14514 1584 aa13.48□□□□□ -0.25
CACNA1A-236ENST00000637117 TULP4Q9NRJ4 1543 aa13.48□□□□□ -0.25
CACNA1A-236ENST00000637117 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
CACNA1A-236ENST00000637117 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1A-236ENST00000637117 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
CACNA1A-236ENST00000637117 NBPF8Q3BBV2 869 aa13.46□□□□□ -0.25
CACNA1A-236ENST00000637117 NBPF14Q5TI25 921 aa13.46□□□□□ -0.25
CACNA1A-236ENST00000637117 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
CACNA1A-236ENST00000637117 PARD3Q8TEW0 1356 aa13.45□□□□□ -0.26
CACNA1A-236ENST00000637117 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-236ENST00000637117 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
CACNA1A-236ENST00000637117 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
CACNA1A-236ENST00000637117 CDK19Q9BWU1 502 aa13.44□□□□□ -0.26
CACNA1A-236ENST00000637117 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
CACNA1A-236ENST00000637117 YY1P25490 414 aa13.43□□□□□ -0.26
CACNA1A-236ENST00000637117 PSEN1P49768 467 aa13.43□□□□□ -0.26
CACNA1A-236ENST00000637117 LARP1Q6PKG0 1096 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-236ENST00000637117 TCP11L2Q8N4U5 519 aa13.43□□□□□ -0.26
CACNA1A-236ENST00000637117 ACEP12821 1306 aa13.42□□□□□ -0.26
CACNA1A-236ENST00000637117 ABTB2Q8N961 1025 aa13.42□□□□□ -0.26
CACNA1A-236ENST00000637117 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
CACNA1A-236ENST00000637117 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
CACNA1A-236ENST00000637117 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
CACNA1A-236ENST00000637117 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-236ENST00000637117 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-236ENST00000637117 ATP7BP35670 1465 aa13.4□□□□□ -0.26
CACNA1A-236ENST00000637117 KCNQ2O43526 872 aa13.39□□□□□ -0.27
CACNA1A-236ENST00000637117 POLR3AO14802 1390 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-236ENST00000637117 RAB3GAP2Q9H2M9 1393 aa13.39□□□□□ -0.27
CACNA1A-236ENST00000637117 CAMTA1Q9Y6Y1 1673 aa13.39□□□□□ -0.27
CACNA1A-236ENST00000637117 C11orf95C9JLR9 678 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-236ENST00000637117 GCP02774 474 aa13.38□□□□□ -0.27
CACNA1A-236ENST00000637117 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
CACNA1A-236ENST00000637117 PHRF1Q9P1Y6 1649 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-236ENST00000637117 CPDO75976 1380 aa13.37□□□□□ -0.27
CACNA1A-236ENST00000637117 ITSN1Q15811 1721 aa13.37□□□□□ -0.27
CACNA1A-236ENST00000637117 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
CACNA1A-236ENST00000637117 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
CACNA1A-236ENST00000637117 MFRPQ9BY79 579 aa13.36□□□□□ -0.27
CACNA1A-236ENST00000637117 USP19O94966 1318 aa13.36□□□□□ -0.27
CACNA1A-236ENST00000637117 RREB1Q92766 1687 aa13.35□□□□□ -0.27
CACNA1A-236ENST00000637117 PLSCR1O15162 318 aa13.35□□□□□ -0.27
CACNA1A-236ENST00000637117 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
CACNA1A-236ENST00000637117 ARHGEF28Q8N1W1 1705 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-236ENST00000637117 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
CACNA1A-236ENST00000637117 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
CACNA1A-236ENST00000637117 MAP3K13O43283 966 aa13.33□□□□□ -0.28
CACNA1A-236ENST00000637117 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-236ENST00000637117 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
CACNA1A-236ENST00000637117 LMO7Q8WWI1 1683 aa13.32□□□□□ -0.28
CACNA1A-236ENST00000637117 DDB1Q16531 1140 aa13.32□□□□□ -0.28
CACNA1A-236ENST00000637117 NRKQ7Z2Y5 1582 aa13.32□□□□□ -0.28
CACNA1A-236ENST00000637117 CRB1P82279 1406 aa13.31□□□□□ -0.28
CACNA1A-236ENST00000637117 COL5A2P05997 1499 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-236ENST00000637117 NLRP6P59044 892 aa13.31□□□□□ -0.28
CACNA1A-236ENST00000637117 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
CACNA1A-236ENST00000637117 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
CACNA1A-236ENST00000637117 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
CACNA1A-236ENST00000637117 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
CACNA1A-236ENST00000637117 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
CACNA1A-236ENST00000637117 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
CACNA1A-236ENST00000637117 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
CACNA1A-236ENST00000637117 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
CACNA1A-236ENST00000637117 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-236ENST00000637117 TOPAZ1Q8N9V7 1692 aa13.3□□□□□ -0.28
CACNA1A-236ENST00000637117 PPIP5K1Q6PFW1 1433 aa13.3□□□□□ -0.28
CACNA1A-236ENST00000637117 PDGFDQ9GZP0 370 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-236ENST00000637117 WDR70Q9NW82 654 aa13.29□□□□□ -0.28
CACNA1A-236ENST00000637117 CABP1Q9NZU7 370 aa13.29□□□□□ -0.28
CACNA1A-236ENST00000637117 PARP4Q9UKK3 1724 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms