RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
CTSD-208ENST00000636843 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.45
CTSD-208ENST00000636843 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.45
CTSD-208ENST00000636843 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.45
CTSD-208ENST00000636843 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
CTSD-208ENST00000636843 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
CTSD-208ENST00000636843 SBNO2Q9Y2G9 1366 aa17.86■□□□□ 0.45
CTSD-208ENST00000636843 COL18A1P39060 1754 aa17.86■□□□□ 0.45
CTSD-208ENST00000636843 RREB1Q92766 1687 aa17.85■□□□□ 0.45
CTSD-208ENST00000636843 PLSCR1O15162 318 aa17.85■□□□□ 0.45
CTSD-208ENST00000636843 CARD10Q9BWT7 1032 aa17.85■□□□□ 0.45
CTSD-208ENST00000636843 SOX12O15370 315 aa17.84■□□□□ 0.45
CTSD-208ENST00000636843 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
CTSD-208ENST00000636843 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
CTSD-208ENST00000636843 CSB-PGBD3P0DP91 1061 aa17.83■□□□□ 0.45
CTSD-208ENST00000636843 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.45
CTSD-208ENST00000636843 PEAK1Q9H792 1746 aa17.83■□□□□ 0.44
CTSD-208ENST00000636843 NUP188Q5SRE5 1749 aa17.82■□□□□ 0.44
CTSD-208ENST00000636843 BCL9O00512 1426 aa17.82■□□□□ 0.44
CTSD-208ENST00000636843 LRRC37A3O60309 1634 aa17.82■□□□□ 0.44
CTSD-208ENST00000636843 NFAT5O94916 1531 aa17.81■□□□□ 0.44
CTSD-208ENST00000636843 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
CTSD-208ENST00000636843 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
CTSD-208ENST00000636843 CCDC7Q96M83 1385 aa17.81■□□□□ 0.44
CTSD-208ENST00000636843 ABCC6O95255 1503 aa17.8■□□□□ 0.44
CTSD-208ENST00000636843 EXOC5O00471 708 aa17.79■□□□□ 0.44
CTSD-208ENST00000636843 HDGFL2Q7Z4V5 671 aaPredicted RBP17.79■□□□□ 0.44
CTSD-208ENST00000636843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTSD-208ENST00000636843 SPON1Q9HCB6 807 aa17.78■□□□□ 0.44
CTSD-208ENST00000636843 TMC1Q8TDI8 760 aa17.77■□□□□ 0.44
CTSD-208ENST00000636843 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.44
CTSD-208ENST00000636843 SBF2Q86WG5 1849 aa17.77■□□□□ 0.43
CTSD-208ENST00000636843 KCNQ2O43526 872 aa17.77■□□□□ 0.43
CTSD-208ENST00000636843 NME9Q86XW9 330 aa17.77■□□□□ 0.43
CTSD-208ENST00000636843 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
CTSD-208ENST00000636843 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 MON2Q7Z3U7 1717 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 PTF1AQ7RTS3 328 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 SLC12A5Q9H2X9 1139 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 WNK3Q9BYP7 1800 aa17.76■□□□□ 0.43
CTSD-208ENST00000636843 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
CTSD-208ENST00000636843 ERBB3P21860 1342 aa17.75■□□□□ 0.43
CTSD-208ENST00000636843 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
CTSD-208ENST00000636843 PROM2Q8N271 834 aa17.74■□□□□ 0.43
CTSD-208ENST00000636843 PPP1R1BQ9UD71 204 aaPredicted RBP17.74■□□□□ 0.43
CTSD-208ENST00000636843 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
CTSD-208ENST00000636843 NLRP2Q9NX02 1062 aa17.73■□□□□ 0.43
CTSD-208ENST00000636843 TNS2Q63HR2 1409 aa17.73■□□□□ 0.43
CTSD-208ENST00000636843 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
CTSD-208ENST00000636843 SLC24A1O60721 1099 aa17.72■□□□□ 0.43
CTSD-208ENST00000636843 IL2RBP14784 551 aa17.71■□□□□ 0.43
CTSD-208ENST00000636843 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
CTSD-208ENST00000636843 ANKRD24Q8TF21 1146 aa17.71■□□□□ 0.43
CTSD-208ENST00000636843 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
CTSD-208ENST00000636843 NINLQ9Y2I6 1382 aa17.7■□□□□ 0.42
CTSD-208ENST00000636843 TESK2Q96S53 571 aa17.68■□□□□ 0.42
CTSD-208ENST00000636843 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
CTSD-208ENST00000636843 IP6K1Q92551 441 aa17.67■□□□□ 0.42
CTSD-208ENST00000636843 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
CTSD-208ENST00000636843 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
CTSD-208ENST00000636843 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
CTSD-208ENST00000636843 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
CTSD-208ENST00000636843 LTN1O94822 1766 aa17.64■□□□□ 0.42
CTSD-208ENST00000636843 COG3Q96JB2 828 aa17.64■□□□□ 0.41
CTSD-208ENST00000636843 PDGFDQ9GZP0 370 aaPredicted RBP17.64■□□□□ 0.41
CTSD-208ENST00000636843 CASZ1Q86V15 1759 aa17.64■□□□□ 0.41
CTSD-208ENST00000636843 ZBTB7AO95365 584 aa17.63■□□□□ 0.41
CTSD-208ENST00000636843 NHSQ6T4R5 1651 aa17.63■□□□□ 0.41
CTSD-208ENST00000636843 YY1P25490 414 aa17.62■□□□□ 0.41
CTSD-208ENST00000636843 PTGER2P43116 358 aa17.62■□□□□ 0.41
CTSD-208ENST00000636843 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
CTSD-208ENST00000636843 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
CTSD-208ENST00000636843 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
CTSD-208ENST00000636843 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
CTSD-208ENST00000636843 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
CTSD-208ENST00000636843 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
CTSD-208ENST00000636843 HOXC9P31274 260 aa17.59■□□□□ 0.41
CTSD-208ENST00000636843 AMPHP49418 695 aa17.59■□□□□ 0.41
CTSD-208ENST00000636843 TMF1P82094 1093 aa17.58■□□□□ 0.41
CTSD-208ENST00000636843 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.41
CTSD-208ENST00000636843 FAM208AQ9UK61 1670 aaKnown RBP17.56■□□□□ 0.4
CTSD-208ENST00000636843 FBLN1P23142 703 aa17.56■□□□□ 0.4
CTSD-208ENST00000636843 SLC27A3Q5K4L6 730 aa17.56■□□□□ 0.4
CTSD-208ENST00000636843 SGIP1Q9BQI5 828 aa17.56■□□□□ 0.4
CTSD-208ENST00000636843 KAT6BQ8WYB5 2073 aa17.55■□□□□ 0.4
CTSD-208ENST00000636843 BTAF1O14981 1849 aa17.55■□□□□ 0.4
CTSD-208ENST00000636843 RTL1A6NKG5 1358 aa17.55■□□□□ 0.4
CTSD-208ENST00000636843 LRRC4BQ9NT99 713 aa17.55■□□□□ 0.4
CTSD-208ENST00000636843 FYB1O15117 783 aa17.54■□□□□ 0.4
CTSD-208ENST00000636843 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
CTSD-208ENST00000636843 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
CTSD-208ENST00000636843 USP47Q96K76 1375 aa17.54■□□□□ 0.4
CTSD-208ENST00000636843 PAPPAQ13219 1627 aa17.53■□□□□ 0.4
CTSD-208ENST00000636843 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
CTSD-208ENST00000636843 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
CTSD-208ENST00000636843 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
CTSD-208ENST00000636843 MYOM1P52179 1685 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms