RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
CACNA1A-229ENST00000636670 LARP1Q6PKG0 1096 aaKnown RBP22.81■■□□□ 1.24
CACNA1A-229ENST00000636670 CCDC61Q9Y6R9 512 aa22.8■■□□□ 1.24
CACNA1A-229ENST00000636670 OVOS2A0A0G2JMS6 1433 aa22.78■■□□□ 1.24
CACNA1A-229ENST00000636670 OVOS2A0A0J9YW53 1432 aa22.78■■□□□ 1.24
CACNA1A-229ENST00000636670 OVOS2Q6IE36 1432 aa22.78■■□□□ 1.24
CACNA1A-229ENST00000636670 SLC24A1O60721 1099 aa22.77■■□□□ 1.24
CACNA1A-229ENST00000636670 CABP2Q9NPB3 220 aa22.77■■□□□ 1.24
CACNA1A-229ENST00000636670 ST20-MTHFSA0A0A6YYL1 179 aa22.76■■□□□ 1.23
CACNA1A-229ENST00000636670 PROM2Q8N271 834 aa22.76■■□□□ 1.23
CACNA1A-229ENST00000636670 TESK2Q96S53 571 aa22.76■■□□□ 1.23
CACNA1A-229ENST00000636670 MTFR1LQ9H019 292 aa22.76■■□□□ 1.23
CACNA1A-229ENST00000636670 PHRF1Q9P1Y6 1649 aaKnown RBP22.75■■□□□ 1.23
CACNA1A-229ENST00000636670 PLEKHG3A1L390 1219 aa22.75■■□□□ 1.23
CACNA1A-229ENST00000636670 STK32BQ9NY57 414 aa22.75■■□□□ 1.23
CACNA1A-229ENST00000636670 PARP4Q9UKK3 1724 aaKnown RBP22.74■■□□□ 1.23
CACNA1A-229ENST00000636670 SGIP1Q9BQI5 828 aa22.73■■□□□ 1.23
CACNA1A-229ENST00000636670 PEAK1Q9H792 1746 aa22.72■■□□□ 1.23
CACNA1A-229ENST00000636670 SLC15A2Q16348 729 aa22.72■■□□□ 1.23
CACNA1A-229ENST00000636670 ACEP12821 1306 aa22.72■■□□□ 1.23
CACNA1A-229ENST00000636670 BRD4O60885 1362 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-229ENST00000636670 NUTM2GQ5VZR2 741 aa22.71■■□□□ 1.23
CACNA1A-229ENST00000636670 PUS7Q96PZ0 661 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-229ENST00000636670 CEP350Q5VT06 3117 aa22.71■■□□□ 1.23
CACNA1A-229ENST00000636670 USP6P35125 1406 aa22.71■■□□□ 1.23
CACNA1A-229ENST00000636670 PIK3C2AO00443 1686 aa22.71■■□□□ 1.23
CACNA1A-229ENST00000636670 USP54Q70EL1 1684 aa22.71■■□□□ 1.23
CACNA1A-229ENST00000636670 GPR162Q16538 588 aa22.7■■□□□ 1.22
CACNA1A-229ENST00000636670 ARXQ96QS3 562 aa22.7■■□□□ 1.22
CACNA1A-229ENST00000636670 MAP3K5Q99683 1374 aa22.7■■□□□ 1.22
CACNA1A-229ENST00000636670 SBF2Q86WG5 1849 aa22.7■■□□□ 1.22
CACNA1A-229ENST00000636670 CPDO75976 1380 aa22.69■■□□□ 1.22
CACNA1A-229ENST00000636670 PTF1AQ7RTS3 328 aa22.69■■□□□ 1.22
CACNA1A-229ENST00000636670 DDB1Q16531 1140 aa22.68■■□□□ 1.22
CACNA1A-229ENST00000636670 CPSF1Q10570 1443 aaKnown RBP22.67■■□□□ 1.22
CACNA1A-229ENST00000636670 TXNRD1Q16881 649 aa22.67■■□□□ 1.22
CACNA1A-229ENST00000636670 LMO7Q8WWI1 1683 aa22.67■■□□□ 1.22
CACNA1A-229ENST00000636670 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
CACNA1A-229ENST00000636670 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
CACNA1A-229ENST00000636670 TMF1P82094 1093 aa22.66■■□□□ 1.22
CACNA1A-229ENST00000636670 CABP1Q9NZU7 370 aa22.65■■□□□ 1.22
CACNA1A-229ENST00000636670 CRB1P82279 1406 aa22.65■■□□□ 1.22
CACNA1A-229ENST00000636670 COL5A2P05997 1499 aaPredicted RBP22.63■■□□□ 1.21
CACNA1A-229ENST00000636670 CDCA8Q53HL2 280 aa22.62■■□□□ 1.21
CACNA1A-229ENST00000636670 ABTB2Q8N961 1025 aa22.62■■□□□ 1.21
CACNA1A-229ENST00000636670 BCL9O00512 1426 aa22.62■■□□□ 1.21
CACNA1A-229ENST00000636670 KIF20BQ96Q89 1820 aa22.61■■□□□ 1.21
CACNA1A-229ENST00000636670 HSPA5P11021 654 aaKnown RBP22.6■■□□□ 1.21
CACNA1A-229ENST00000636670 LRRC37A3O60309 1634 aa22.6■■□□□ 1.21
CACNA1A-229ENST00000636670 SLIT3O75094 1523 aa22.59■■□□□ 1.21
CACNA1A-229ENST00000636670 MARCH10Q8NA82 808 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-229ENST00000636670 ZNF692Q9BU19 519 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-229ENST00000636670 A0A1W2PP64 1363 aa22.59■■□□□ 1.21
CACNA1A-229ENST00000636670 KTN1Q86UP2 1357 aaKnown RBP22.59■■□□□ 1.21
CACNA1A-229ENST00000636670 USP19O94966 1318 aa22.58■■□□□ 1.21
CACNA1A-229ENST00000636670 EDC4Q6P2E9 1401 aaKnown RBP22.58■■□□□ 1.21
CACNA1A-229ENST00000636670 GCP02774 474 aa22.58■■□□□ 1.21
CACNA1A-229ENST00000636670 AATKQ6ZMQ8 1374 aa22.58■■□□□ 1.21
CACNA1A-229ENST00000636670 SHANK3Q9BYB0 1731 aa22.57■■□□□ 1.2
CACNA1A-229ENST00000636670 ANKRD36BQ8N2N9 1353 aa22.56■■□□□ 1.2
CACNA1A-229ENST00000636670 NLRP13Q86W25 1043 aa22.56■■□□□ 1.2
CACNA1A-229ENST00000636670 TMC1Q8TDI8 760 aa22.56■■□□□ 1.2
CACNA1A-229ENST00000636670 CDCA7Q9BWT1 371 aaPredicted RBP22.56■■□□□ 1.2
CACNA1A-229ENST00000636670 TTC21AQ8NDW8 1320 aa22.56■■□□□ 1.2
CACNA1A-229ENST00000636670 TOM1L2Q6ZVM7 507 aa22.55■■□□□ 1.2
CACNA1A-229ENST00000636670 HDGFL2Q7Z4V5 671 aaPredicted RBP22.55■■□□□ 1.2
CACNA1A-229ENST00000636670 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
CACNA1A-229ENST00000636670 TERF2IPQ9NYB0 399 aa22.54■■□□□ 1.2
CACNA1A-229ENST00000636670 HSPA6P17066 643 aa22.53■■□□□ 1.2
CACNA1A-229ENST00000636670 SLC12A5Q9H2X9 1139 aa22.53■■□□□ 1.2
CACNA1A-229ENST00000636670 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
CACNA1A-229ENST00000636670 KLHL34Q8N239 644 aa22.51■■□□□ 1.19
CACNA1A-229ENST00000636670 ANKRD26Q9UPS8 1709 aa22.51■■□□□ 1.19
CACNA1A-229ENST00000636670 GRIN3BO60391 1043 aa22.5■■□□□ 1.19
CACNA1A-229ENST00000636670 LTN1O94822 1766 aa22.5■■□□□ 1.19
CACNA1A-229ENST00000636670 NFAT5O94916 1531 aa22.48■■□□□ 1.19
CACNA1A-229ENST00000636670 ZBTB7CA1YPR0 619 aa22.48■■□□□ 1.19
CACNA1A-229ENST00000636670 POLD1P28340 1107 aa22.48■■□□□ 1.19
CACNA1A-229ENST00000636670 SLC16A10Q8TF71 515 aa22.48■■□□□ 1.19
CACNA1A-229ENST00000636670 USP31Q70CQ4 1352 aa22.47■■□□□ 1.19
CACNA1A-229ENST00000636670 ABCC6O95255 1503 aa22.47■■□□□ 1.19
CACNA1A-229ENST00000636670 EXOC5O00471 708 aa22.46■■□□□ 1.19
CACNA1A-229ENST00000636670 WDR17Q8IZU2 1322 aa22.46■■□□□ 1.19
CACNA1A-229ENST00000636670 GOLGB1Q14789 3259 aaKnown RBP22.45■■□□□ 1.18
CACNA1A-229ENST00000636670 GPBP1L1Q9HC44 474 aaPredicted RBP22.45■■□□□ 1.18
CACNA1A-229ENST00000636670 COL18A1P39060 1754 aa22.45■■□□□ 1.18
CACNA1A-229ENST00000636670 ATP10DQ9P241 1426 aa22.44■■□□□ 1.18
CACNA1A-229ENST00000636670 NLRP6P59044 892 aa22.43■■□□□ 1.18
CACNA1A-229ENST00000636670 WNK3Q9BYP7 1800 aa22.43■■□□□ 1.18
CACNA1A-229ENST00000636670 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
CACNA1A-229ENST00000636670 ZNF827Q17R98 1081 aa22.42■■□□□ 1.18
CACNA1A-229ENST00000636670 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
CACNA1A-229ENST00000636670 RGPD5Q99666 1765 aa22.42■■□□□ 1.18
CACNA1A-229ENST00000636670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.41■■□□□ 1.18
CACNA1A-229ENST00000636670 CARD10Q9BWT7 1032 aa22.41■■□□□ 1.18
CACNA1A-229ENST00000636670 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
CACNA1A-229ENST00000636670 YBX3P16989 372 aaKnown RBP eCLIP22.4■■□□□ 1.18
CACNA1A-229ENST00000636670 AXIN2Q9Y2T1 843 aa22.4■■□□□ 1.18
CACNA1A-229ENST00000636670 KIF7Q2M1P5 1343 aa22.38■■□□□ 1.17
CACNA1A-229ENST00000636670 NME9Q86XW9 330 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms