RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
CHRNA7-217ENST00000636603 EIF4A2Q14240 407 aaKnown RBP20.27■□□□□ 0.84
CHRNA7-217ENST00000636603 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.83
CHRNA7-217ENST00000636603 NFAT5O94916 1531 aa20.26■□□□□ 0.83
CHRNA7-217ENST00000636603 APAF1O14727 1248 aa20.26■□□□□ 0.83
CHRNA7-217ENST00000636603 USP19O94966 1318 aa20.26■□□□□ 0.83
CHRNA7-217ENST00000636603 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
CHRNA7-217ENST00000636603 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
CHRNA7-217ENST00000636603 HMOX1P09601 288 aa20.26■□□□□ 0.83
CHRNA7-217ENST00000636603 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
CHRNA7-217ENST00000636603 KCNH5Q8NCM2 988 aa20.25■□□□□ 0.83
CHRNA7-217ENST00000636603 LTN1O94822 1766 aa20.25■□□□□ 0.83
CHRNA7-217ENST00000636603 HOXC9P31274 260 aa20.24■□□□□ 0.83
CHRNA7-217ENST00000636603 ZC3H6P61129 1189 aaKnown RBP20.24■□□□□ 0.83
CHRNA7-217ENST00000636603 FLT4P35916 1363 aa20.24■□□□□ 0.83
CHRNA7-217ENST00000636603 SLIT3O75094 1523 aa20.24■□□□□ 0.83
CHRNA7-217ENST00000636603 NHSL1Q5SYE7 1610 aa20.23■□□□□ 0.83
CHRNA7-217ENST00000636603 LTV1Q96GA3 475 aaPredicted RBP20.23■□□□□ 0.83
CHRNA7-217ENST00000636603 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
CHRNA7-217ENST00000636603 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
CHRNA7-217ENST00000636603 NEUROD2Q15784 382 aa20.21■□□□□ 0.83
CHRNA7-217ENST00000636603 ARHGEF25Q86VW2 580 aa20.21■□□□□ 0.83
CHRNA7-217ENST00000636603 PLEKHF1Q96S99 279 aa20.2■□□□□ 0.83
CHRNA7-217ENST00000636603 AEBP1Q8IUX7 1158 aa20.2■□□□□ 0.82
CHRNA7-217ENST00000636603 ARHGEF10O15013 1369 aa20.2■□□□□ 0.82
CHRNA7-217ENST00000636603 TCP11L2Q8N4U5 519 aa20.19■□□□□ 0.82
CHRNA7-217ENST00000636603 RSPH6AQ9H0K4 717 aa20.19■□□□□ 0.82
CHRNA7-217ENST00000636603 PRKAR2BP31323 418 aa20.19■□□□□ 0.82
CHRNA7-217ENST00000636603 IP6K1Q92551 441 aa20.19■□□□□ 0.82
CHRNA7-217ENST00000636603 AXIN2Q9Y2T1 843 aa20.18■□□□□ 0.82
CHRNA7-217ENST00000636603 PHRF1Q9P1Y6 1649 aaKnown RBP20.18■□□□□ 0.82
CHRNA7-217ENST00000636603 SULT6B1Q6IMI4 303 aa20.17■□□□□ 0.82
CHRNA7-217ENST00000636603 FBXO41Q8TF61 875 aa20.17■□□□□ 0.82
CHRNA7-217ENST00000636603 CDCA7LQ96GN5 454 aa20.17■□□□□ 0.82
CHRNA7-217ENST00000636603 FCHSD2O94868 740 aa20.16■□□□□ 0.82
CHRNA7-217ENST00000636603 CHRNA2Q15822 529 aa20.16■□□□□ 0.82
CHRNA7-217ENST00000636603 PHACTR3Q96KR7 559 aa20.16■□□□□ 0.82
CHRNA7-217ENST00000636603 EYA1Q99502 592 aa20.16■□□□□ 0.82
CHRNA7-217ENST00000636603 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
CHRNA7-217ENST00000636603 RTL1A6NKG5 1358 aa20.14■□□□□ 0.82
CHRNA7-217ENST00000636603 KIF24Q5T7B8 1368 aa20.14■□□□□ 0.82
CHRNA7-217ENST00000636603 RGPD5Q99666 1765 aa20.14■□□□□ 0.81
CHRNA7-217ENST00000636603 USHBP1Q8N6Y0 703 aa20.14■□□□□ 0.81
CHRNA7-217ENST00000636603 HAP1P54257 671 aaPredicted RBP20.13■□□□□ 0.81
CHRNA7-217ENST00000636603 LRRC59Q96AG4 307 aaKnown RBP20.13■□□□□ 0.81
CHRNA7-217ENST00000636603 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
CHRNA7-217ENST00000636603 MAPK8IP3Q9UPT6 1336 aa20.13■□□□□ 0.81
CHRNA7-217ENST00000636603 AHDC1Q5TGY3 1603 aaPredicted RBP20.13■□□□□ 0.81
CHRNA7-217ENST00000636603 KIAA0232Q92628 1395 aa20.12■□□□□ 0.81
CHRNA7-217ENST00000636603 PHLPP1O60346 1717 aa20.11■□□□□ 0.81
CHRNA7-217ENST00000636603 RGPD2P0DJD1 1756 aa20.11■□□□□ 0.81
CHRNA7-217ENST00000636603 TMPOP42166 694 aaKnown RBP20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 NBPF6Q5VWK0 638 aa20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 ANKRD24Q8TF21 1146 aa20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 NBPF4Q96M43 638 aa20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 IGSF1Q8N6C5 1336 aa20.1■□□□□ 0.81
CHRNA7-217ENST00000636603 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
CHRNA7-217ENST00000636603 PNNQ9H307 717 aaKnown RBP20.09■□□□□ 0.81
CHRNA7-217ENST00000636603 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
CHRNA7-217ENST00000636603 ABCA3Q99758 1704 aa20.08■□□□□ 0.81
CHRNA7-217ENST00000636603 RCAN3Q9UKA8 241 aa20.08■□□□□ 0.8
CHRNA7-217ENST00000636603 COL18A1P39060 1754 aa20.08■□□□□ 0.8
CHRNA7-217ENST00000636603 RIPK4P57078 832 aa20.07■□□□□ 0.8
CHRNA7-217ENST00000636603 PRDM11Q9NQV5 511 aa20.07■□□□□ 0.8
CHRNA7-217ENST00000636603 COL16A1Q07092 1604 aaPredicted RBP20.07■□□□□ 0.8
CHRNA7-217ENST00000636603 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
CHRNA7-217ENST00000636603 CPDO75976 1380 aa20.05■□□□□ 0.8
CHRNA7-217ENST00000636603 NEFMP07197 916 aa20.05■□□□□ 0.8
CHRNA7-217ENST00000636603 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
CHRNA7-217ENST00000636603 ERBB3P21860 1342 aa20.04■□□□□ 0.8
CHRNA7-217ENST00000636603 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
CHRNA7-217ENST00000636603 KDRP35968 1356 aa20.04■□□□□ 0.8
CHRNA7-217ENST00000636603 NFE2L2Q16236 605 aa20.03■□□□□ 0.8
CHRNA7-217ENST00000636603 EXOC6Q8TAG9 804 aa20.03■□□□□ 0.8
CHRNA7-217ENST00000636603 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
CHRNA7-217ENST00000636603 HSPA1LP34931 641 aa20.03■□□□□ 0.8
CHRNA7-217ENST00000636603 CSB-PGBD3P0DP91 1061 aa20.02■□□□□ 0.79
CHRNA7-217ENST00000636603 THUMPD2Q9BTF0 503 aaKnown RBP20.02■□□□□ 0.79
CHRNA7-217ENST00000636603 CCDC27Q2M243 656 aa20.01■□□□□ 0.79
CHRNA7-217ENST00000636603 NGEFQ8N5V2 710 aa20.01■□□□□ 0.79
CHRNA7-217ENST00000636603 NLRP2Q9NX02 1062 aa20.01■□□□□ 0.79
CHRNA7-217ENST00000636603 DLG5Q8TDM6 1919 aa20.01■□□□□ 0.79
CHRNA7-217ENST00000636603 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
CHRNA7-217ENST00000636603 SLFN5Q08AF3 891 aa20■□□□□ 0.79
CHRNA7-217ENST00000636603 MTHFSDQ2M296 383 aaKnown RBP20■□□□□ 0.79
CHRNA7-217ENST00000636603 NUTM2BA6NNL0 878 aaPredicted RBP20■□□□□ 0.79
CHRNA7-217ENST00000636603 NUTM2EB1AL46 878 aaPredicted RBP20■□□□□ 0.79
CHRNA7-217ENST00000636603 DCTN1Q14203 1278 aa20■□□□□ 0.79
CHRNA7-217ENST00000636603 NUTM2AQ8IVF1 878 aaPredicted RBP20■□□□□ 0.79
CHRNA7-217ENST00000636603 DUSP27Q5VZP5 1158 aa19.99■□□□□ 0.79
CHRNA7-217ENST00000636603 ADAMTS2O95450 1211 aa19.98■□□□□ 0.79
CHRNA7-217ENST00000636603 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
CHRNA7-217ENST00000636603 ILDR1Q86SU0 546 aaPredicted RBP19.97■□□□□ 0.79
CHRNA7-217ENST00000636603 STRN4Q9NRL3 753 aa19.97■□□□□ 0.79
CHRNA7-217ENST00000636603 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
CHRNA7-217ENST00000636603 LMO7Q8WWI1 1683 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms