RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 RTL5Q5HYW3 569 aaPredicted RBP3.76□□□□□ -1.81
ATRX-220ENST00000635865 TXNDC2Q86VQ3 553 aa3.76□□□□□ -1.81
ATRX-220ENST00000635865 RBM46Q8TBY0 533 aaKnown RBP3.76□□□□□ -1.81
ATRX-220ENST00000635865 GJD4Q96KN9 370 aaPredicted RBP3.76□□□□□ -1.81
ATRX-220ENST00000635865 CHMP4AQ9BY43 222 aa3.76□□□□□ -1.81
ATRX-220ENST00000635865 SLC6A16Q9GZN6 736 aa3.76□□□□□ -1.81
ATRX-220ENST00000635865 MOXD2PA6NHM9 499 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 ACTN4O43707 911 aaKnown RBP3.75□□□□□ -1.81
ATRX-220ENST00000635865 TCF3P15923 654 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 RASSF7Q02833 373 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 SEMA3FQ13275 785 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 QPCTQ16769 361 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 ZNF326Q5BKZ1 582 aaKnown RBP3.75□□□□□ -1.81
ATRX-220ENST00000635865 PRPF38BQ5VTL8 546 aaKnown RBP3.75□□□□□ -1.81
ATRX-220ENST00000635865 PADI6Q6TGC4 694 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 SULF1Q8IWU6 871 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 TMEM151AQ8N4L1 468 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 SREK1Q8WXA9 508 aaKnown RBP3.75□□□□□ -1.81
ATRX-220ENST00000635865 BCL2L13Q9BXK5 485 aa3.75□□□□□ -1.81
ATRX-220ENST00000635865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.74□□□□□ -1.81
ATRX-220ENST00000635865 GDF11O95390 407 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 CD46P15529 392 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 NCLP19338 710 aaKnown RBP3.74□□□□□ -1.81
ATRX-220ENST00000635865 NDUFV2P19404 249 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 VEGFBP49765 207 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 ELOAQ14241 798 aaKnown RBP3.74□□□□□ -1.81
ATRX-220ENST00000635865 DNAJC14Q6Y2X3 702 aaPredicted RBP3.74□□□□□ -1.81
ATRX-220ENST00000635865 PNMA1Q8ND90 353 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 C8orf37Q96NL8 207 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 PSMG3-AS1Q96PY0 264 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 EYA1Q99502 592 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 BCL11AQ9H165 835 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 ZBTB3Q9H5J0 574 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 PCDHB15Q9Y5E8 787 aa3.74□□□□□ -1.81
ATRX-220ENST00000635865 MAFBQ9Y5Q3 323 aaPredicted RBP3.74□□□□□ -1.81
ATRX-220ENST00000635865 CD2BP2O95400 341 aaKnown RBP3.73□□□□□ -1.81
ATRX-220ENST00000635865 PRR7Q8TB68 274 aa3.73□□□□□ -1.81
ATRX-220ENST00000635865 GIPC2Q8TF65 315 aa3.73□□□□□ -1.81
ATRX-220ENST00000635865 UCN2Q96RP3 112 aa3.73□□□□□ -1.81
ATRX-220ENST00000635865 TTC24A2A3L6 582 aaPredicted RBP3.72□□□□□ -1.81
ATRX-220ENST00000635865 J3QL48 77 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 ATP9BO43861 1147 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 SMARCA5O60264 1052 aaPredicted RBP3.72□□□□□ -1.81
ATRX-220ENST00000635865 MARSP56192 900 aaKnown RBP3.72□□□□□ -1.81
ATRX-220ENST00000635865 ZC3H6P61129 1189 aaKnown RBP3.72□□□□□ -1.81
ATRX-220ENST00000635865 EIF4G2P78344 907 aaKnown RBP eCLIP3.72□□□□□ -1.81
ATRX-220ENST00000635865 CTDSPL2Q05D32 466 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 TBC1D9Q6ZT07 1266 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 HELBQ8NG08 1087 aaPredicted RBP3.72□□□□□ -1.81
ATRX-220ENST00000635865 SNIP1Q8TAD8 396 aaKnown RBP3.72□□□□□ -1.81
ATRX-220ENST00000635865 CABLES1Q8TDN4 633 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 HPS1Q92902 700 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 SPATA32Q96LK8 384 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 POLR3GLQ9BT43 218 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 TRIM34Q9BYJ4 488 aa3.72□□□□□ -1.81
ATRX-220ENST00000635865 PPP1R1BQ9UD71 204 aaPredicted RBP3.72□□□□□ -1.81
ATRX-220ENST00000635865 RCCD1A6NED2 376 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 SOWAHDA6NJG2 315 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 DDX11L8A8MPP1 907 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 WNT7AO00755 349 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 NR1I2O75469 434 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 VSIG8P0DPA2 414 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 VAMP1P23763 118 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 SSFA2P28290 1259 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 SLC4A3P48751 1232 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 SF3A1Q15459 793 aaKnown RBP3.71□□□□□ -1.82
ATRX-220ENST00000635865 KANK4Q5T7N3 995 aaPredicted RBP3.71□□□□□ -1.82
ATRX-220ENST00000635865 TMEM164Q5U3C3 297 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 PHLDB3Q6NSJ2 640 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 UBXN4Q92575 508 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 CADPSQ9ULU8 1353 aa3.71□□□□□ -1.82
ATRX-220ENST00000635865 ANKRD33BA6NCL7 494 aa3.7□□□□□ -1.82
ATRX-220ENST00000635865 KDM4AO75164 1064 aa3.7□□□□□ -1.82
ATRX-220ENST00000635865 IGHA1P01876 353 aa3.7□□□□□ -1.82
ATRX-220ENST00000635865 USP46P62068 366 aa3.7□□□□□ -1.82
ATRX-220ENST00000635865 SCUBE3Q8IX30 993 aa3.7□□□□□ -1.82
ATRX-220ENST00000635865 ANKRD13AQ8IZ07 590 aa3.7□□□□□ -1.82
ATRX-220ENST00000635865 HMX1Q9NP08 348 aaPredicted RBP3.7□□□□□ -1.82
ATRX-220ENST00000635865 BIN2Q9UBW5 565 aaPredicted RBP3.7□□□□□ -1.82
ATRX-220ENST00000635865 NOVA2Q9UNW9 492 aaKnown RBP3.7□□□□□ -1.82
ATRX-220ENST00000635865 GPR37L1O60883 481 aa3.69□□□□□ -1.82
ATRX-220ENST00000635865 FDX1P10109 184 aa3.69□□□□□ -1.82
ATRX-220ENST00000635865 KMT5BQ4FZB7 885 aa3.69□□□□□ -1.82
ATRX-220ENST00000635865 FAM200AQ8TCP9 573 aa3.69□□□□□ -1.82
ATRX-220ENST00000635865 TSC1Q92574 1164 aa3.69□□□□□ -1.82
ATRX-220ENST00000635865 ZMIZ1Q9ULJ6 1067 aa3.69□□□□□ -1.82
ATRX-220ENST00000635865 FCF1Q9Y324 198 aaKnown RBP3.69□□□□□ -1.82
ATRX-220ENST00000635865 CFHP08603 1231 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 NAALADL2Q58DX5 795 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 NOM1Q5C9Z4 860 aaKnown RBP3.68□□□□□ -1.82
ATRX-220ENST00000635865 LARP1Q6PKG0 1096 aaKnown RBP3.68□□□□□ -1.82
ATRX-220ENST00000635865 TRIM46Q7Z4K8 759 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 RDH13Q8NBN7 331 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 NFATC2IPQ8NCF5 419 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 STK32AQ8WU08 396 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 LRRN4Q8WUT4 740 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 SPSB2Q99619 263 aa3.68□□□□□ -1.82
ATRX-220ENST00000635865 CDCA7Q9BWT1 371 aaPredicted RBP3.68□□□□□ -1.82
ATRX-220ENST00000635865 FAM196BA6NMK8 535 aa3.67□□□□□ -1.82
ATRX-220ENST00000635865 ADAM23O75077 832 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms