RNA–Protein interactions for RNA: ENST00000635865.1

ATRX-220, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 100 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-220ENST00000635865 AEBP2Q6ZN18 517 aaPredicted RBP11.47□□□□□ -0.57
ATRX-220ENST00000635865 CHIC1Q5VXU3 224 aa10.62□□□□□ -0.71
ATRX-220ENST00000635865 SENP3Q9H4L4 574 aaPredicted RBP9.79□□□□□ -0.84
ATRX-220ENST00000635865 PHF23Q9BUL5 403 aaPredicted RBP9.62□□□□□ -0.87
ATRX-220ENST00000635865 POTEDQ86YR6 584 aa9.42□□□□□ -0.9
ATRX-220ENST00000635865 FOXD1Q16676 465 aa9.22□□□□□ -0.93
ATRX-220ENST00000635865 MSH5O43196 834 aa8.78□□□□□ -1
ATRX-220ENST00000635865 PIAS4Q8N2W9 510 aaPredicted RBP8.45□□□□□ -1.06
ATRX-220ENST00000635865 PPP6R1Q9UPN7 881 aa8.27□□□□□ -1.09
ATRX-220ENST00000635865 ADRA2BP18089 450 aa8.18□□□□□ -1.1
ATRX-220ENST00000635865 PLPPR3Q6T4P5 718 aa8.05□□□□□ -1.12
ATRX-220ENST00000635865 CACNB1Q02641 598 aaPredicted RBP7.79□□□□□ -1.16
ATRX-220ENST00000635865 DMRT2Q9Y5R5 561 aa7.72□□□□□ -1.17
ATRX-220ENST00000635865 MAPK8IP2Q13387 824 aaPredicted RBP7.67□□□□□ -1.18
ATRX-220ENST00000635865 RNF39Q9H2S5 420 aa7.48□□□□□ -1.21
ATRX-220ENST00000635865 SCAF1Q9H7N4 1312 aaKnown RBP7.43□□□□□ -1.22
ATRX-220ENST00000635865 DCAF8L1A6NGE4 600 aa7.32□□□□□ -1.24
ATRX-220ENST00000635865 C1QBPQ07021 282 aaKnown RBP7.32□□□□□ -1.24
ATRX-220ENST00000635865 HOXD11P31277 338 aaPredicted RBP7.26□□□□□ -1.25
ATRX-220ENST00000635865 POTEHQ6S545 545 aa7.26□□□□□ -1.25
ATRX-220ENST00000635865 DNAJC5BQ9UF47 199 aa7.13□□□□□ -1.27
ATRX-220ENST00000635865 RNF216Q9NWF9 866 aaPredicted RBP7.06□□□□□ -1.28
ATRX-220ENST00000635865 PPP4R3CPQ6ZMV5 832 aa7□□□□□ -1.29
ATRX-220ENST00000635865 CNKSR2Q8WXI2 1034 aa6.97□□□□□ -1.29
ATRX-220ENST00000635865 DSG3P32926 999 aa6.84□□□□□ -1.31
ATRX-220ENST00000635865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.83□□□□□ -1.324e-8■□□□□ 8.4
ATRX-220ENST00000635865 SPINK5Q9NQ38 1064 aaPredicted RBP6.74□□□□□ -1.33
ATRX-220ENST00000635865 U3KPZ7 1027 aaPredicted RBP6.71□□□□□ -1.34
ATRX-220ENST00000635865 CAPN15O75808 1086 aa6.69□□□□□ -1.34
ATRX-220ENST00000635865 SP7Q8TDD2 431 aaPredicted RBP6.58□□□□□ -1.36
ATRX-220ENST00000635865 CHRDL2Q6WN34 429 aa6.55□□□□□ -1.36
ATRX-220ENST00000635865 NCBP3Q53F19 620 aaKnown RBP6.54□□□□□ -1.36
ATRX-220ENST00000635865 ABCB7O75027 752 aa6.51□□□□□ -1.37
ATRX-220ENST00000635865 NPM3O75607 178 aaKnown RBP6.51□□□□□ -1.37
ATRX-220ENST00000635865 RBM42Q9BTD8 480 aaKnown RBP6.48□□□□□ -1.37
ATRX-220ENST00000635865 TRHP20396 242 aaPredicted RBP6.47□□□□□ -1.37
ATRX-220ENST00000635865 ZNF219Q9P2Y4 722 aaPredicted RBP6.46□□□□□ -1.38
ATRX-220ENST00000635865 APLP2Q06481 763 aa6.38□□□□□ -1.39
ATRX-220ENST00000635865 SLC4A2P04920 1241 aa6.37□□□□□ -1.39
ATRX-220ENST00000635865 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
ATRX-220ENST00000635865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.28□□□□□ -1.4
ATRX-220ENST00000635865 HNRNPUL2Q1KMD3 747 aaKnown RBP6.28□□□□□ -1.4
ATRX-220ENST00000635865 HAX1O00165 279 aa6.27□□□□□ -1.41
ATRX-220ENST00000635865 AKT1S1Q96B36 256 aa6.26□□□□□ -1.41
ATRX-220ENST00000635865 EVX2Q03828 476 aa6.25□□□□□ -1.41
ATRX-220ENST00000635865 SAMD1Q6SPF0 538 aaPredicted RBP6.23□□□□□ -1.41
ATRX-220ENST00000635865 FXR2P51116 673 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATRX-220ENST00000635865 POLA2Q14181 598 aa6.22□□□□□ -1.41
ATRX-220ENST00000635865 REM2Q8IYK8 340 aaPredicted RBP6.21□□□□□ -1.42
ATRX-220ENST00000635865 LHX8Q68G74 356 aa6.16□□□□□ -1.42
ATRX-220ENST00000635865 PITPNM1O00562 1244 aa6.15□□□□□ -1.42
ATRX-220ENST00000635865 PLSCR2Q9NRY7 297 aa6.1□□□□□ -1.43
ATRX-220ENST00000635865 EHMT2Q96KQ7 1210 aa6.07□□□□□ -1.44
ATRX-220ENST00000635865 C19orf67A6NJJ6 358 aa6.04□□□□□ -1.44
ATRX-220ENST00000635865 GABBR2O75899 941 aa6.04□□□□□ -1.44
ATRX-220ENST00000635865 OSCARQ8IYS5 282 aa6.04□□□□□ -1.44
ATRX-220ENST00000635865 ZBTB12Q9Y330 459 aaPredicted RBP6.03□□□□□ -1.44
ATRX-220ENST00000635865 MYCNP04198 464 aaPredicted RBP6□□□□□ -1.45
ATRX-220ENST00000635865 POTEIP0CG38 1075 aa5.96□□□□□ -1.46
ATRX-220ENST00000635865 PRKAR2AP13861 404 aaKnown RBP5.96□□□□□ -1.46
ATRX-220ENST00000635865 KCNA4P22459 653 aa5.95□□□□□ -1.46
ATRX-220ENST00000635865 ATF5Q9Y2D1 282 aaPredicted RBP5.95□□□□□ -1.46
ATRX-220ENST00000635865 SPDYE2BA6NHP3 402 aa5.83□□□□□ -1.48
ATRX-220ENST00000635865 SPDYE6P0CI01 402 aa5.83□□□□□ -1.48
ATRX-220ENST00000635865 SPDYE2Q495Y8 402 aa5.83□□□□□ -1.48
ATRX-220ENST00000635865 SPDYE1Q8NFV5 336 aaPredicted RBP5.83□□□□□ -1.48
ATRX-220ENST00000635865 POTEMA6NI47 508 aa5.81□□□□□ -1.48
ATRX-220ENST00000635865 OTUD5Q96G74 571 aa5.81□□□□□ -1.48
ATRX-220ENST00000635865 CLEC11AQ9Y240 323 aa5.8□□□□□ -1.48
ATRX-220ENST00000635865 CHADLQ6NUI6 762 aa5.79□□□□□ -1.48
ATRX-220ENST00000635865 SLC24A1O60721 1099 aa5.78□□□□□ -1.48
ATRX-220ENST00000635865 POTEGQ6S5H5 508 aa5.78□□□□□ -1.48
ATRX-220ENST00000635865 CSRNP3Q8WYN3 585 aa5.78□□□□□ -1.48
ATRX-220ENST00000635865 CLCN6P51797 869 aa5.76□□□□□ -1.49
ATRX-220ENST00000635865 POTEB2H3BUK9 544 aa5.75□□□□□ -1.49
ATRX-220ENST00000635865 PCDH10Q9P2E7 1040 aa5.75□□□□□ -1.49
ATRX-220ENST00000635865 SSUH2Q9Y2M2 353 aa5.74□□□□□ -1.49
ATRX-220ENST00000635865 CD44P16070 742 aaKnown RBP5.73□□□□□ -1.49
ATRX-220ENST00000635865 DCBLD2Q96PD2 775 aa5.72□□□□□ -1.49
ATRX-220ENST00000635865 SLC4A1APQ9BWU0 796 aaKnown RBP5.72□□□□□ -1.49
ATRX-220ENST00000635865 FOXD4L1Q9NU39 408 aa5.68□□□□□ -1.5
ATRX-220ENST00000635865 ZNF579Q8NAF0 562 aaKnown RBP5.67□□□□□ -1.5
ATRX-220ENST00000635865 FARP1Q9Y4F1 1045 aaPredicted RBP5.67□□□□□ -1.5
ATRX-220ENST00000635865 PRR29P0C7W0 189 aa5.66□□□□□ -1.5
ATRX-220ENST00000635865 FBLN2P98095 1184 aa5.66□□□□□ -1.5
ATRX-220ENST00000635865 MKRN4PQ13434 485 aaPredicted RBP5.66□□□□□ -1.5
ATRX-220ENST00000635865 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
ATRX-220ENST00000635865 ZNF692Q9BU19 519 aaPredicted RBP5.66□□□□□ -1.5
ATRX-220ENST00000635865 GALR2O43603 387 aaPredicted RBP5.62□□□□□ -1.51
ATRX-220ENST00000635865 POTEJP0CG39 1038 aa5.6□□□□□ -1.51
ATRX-220ENST00000635865 PELP1Q8IZL8 1130 aaKnown RBP5.59□□□□□ -1.51
ATRX-220ENST00000635865 ATXN8OSP0DMR3 200 aa5.57□□□□□ -1.52
ATRX-220ENST00000635865 AMER1Q5JTC6 1135 aaPredicted RBP5.57□□□□□ -1.52
ATRX-220ENST00000635865 PABPN1Q86U42 306 aaKnown RBP eCLIP5.57□□□□□ -1.52
ATRX-220ENST00000635865 ZRANB1Q9UGI0 708 aa5.57□□□□□ -1.52
ATRX-220ENST00000635865 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
ATRX-220ENST00000635865 FAM163AQ96GL9 167 aaPredicted RBP5.51□□□□□ -1.53
ATRX-220ENST00000635865 ZBTB22O15209 634 aa5.5□□□□□ -1.53
ATRX-220ENST00000635865 METRNQ9UJH8 293 aa5.5□□□□□ -1.53
ATRX-220ENST00000635865 MAMSTRQ6ZN01 415 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms