RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 CPSF1Q10570 1443 aaKnown RBP14.07□□□□□ -0.16
RHOXF1P3-201ENST00000635058 EXOC5O00471 708 aa14.07□□□□□ -0.16
RHOXF1P3-201ENST00000635058 TRIM26Q12899 539 aaPredicted RBP14.07□□□□□ -0.16
RHOXF1P3-201ENST00000635058 PUS7Q96PZ0 661 aaKnown RBP14.07□□□□□ -0.16
RHOXF1P3-201ENST00000635058 CARD10Q9BWT7 1032 aa14.07□□□□□ -0.16
RHOXF1P3-201ENST00000635058 SLC12A5Q9H2X9 1139 aa14.06□□□□□ -0.16
RHOXF1P3-201ENST00000635058 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
RHOXF1P3-201ENST00000635058 SLIT3O75094 1523 aa14.05□□□□□ -0.16
RHOXF1P3-201ENST00000635058 LMO7Q8WWI1 1683 aa14.04□□□□□ -0.16
RHOXF1P3-201ENST00000635058 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
RHOXF1P3-201ENST00000635058 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
RHOXF1P3-201ENST00000635058 OVOS2A0A0J9YW53 1432 aa14.04□□□□□ -0.16
RHOXF1P3-201ENST00000635058 OVOS2Q6IE36 1432 aa14.04□□□□□ -0.16
RHOXF1P3-201ENST00000635058 PLSCR1O15162 318 aa14.03□□□□□ -0.16
RHOXF1P3-201ENST00000635058 NME9Q86XW9 330 aa14.03□□□□□ -0.16
RHOXF1P3-201ENST00000635058 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
RHOXF1P3-201ENST00000635058 USP31Q70CQ4 1352 aa14.02□□□□□ -0.17
RHOXF1P3-201ENST00000635058 CCDC7Q96M83 1385 aa14.02□□□□□ -0.17
RHOXF1P3-201ENST00000635058 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.17
RHOXF1P3-201ENST00000635058 MARCH10Q8NA82 808 aaPredicted RBP14.01□□□□□ -0.17
RHOXF1P3-201ENST00000635058 PIK3C2AO00443 1686 aa14□□□□□ -0.17
RHOXF1P3-201ENST00000635058 EDC4Q6P2E9 1401 aaKnown RBP13.99□□□□□ -0.17
RHOXF1P3-201ENST00000635058 ANKRD24Q8TF21 1146 aa13.99□□□□□ -0.17
RHOXF1P3-201ENST00000635058 COG3Q96JB2 828 aa13.99□□□□□ -0.17
RHOXF1P3-201ENST00000635058 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
RHOXF1P3-201ENST00000635058 IL2RBP14784 551 aa13.98□□□□□ -0.17
RHOXF1P3-201ENST00000635058 TESK2Q96S53 571 aa13.98□□□□□ -0.17
RHOXF1P3-201ENST00000635058 ERBB3P21860 1342 aa13.97□□□□□ -0.17
RHOXF1P3-201ENST00000635058 TMF1P82094 1093 aa13.97□□□□□ -0.17
RHOXF1P3-201ENST00000635058 SPON1Q9HCB6 807 aa13.97□□□□□ -0.17
RHOXF1P3-201ENST00000635058 PPP1R1BQ9UD71 204 aaPredicted RBP13.97□□□□□ -0.17
RHOXF1P3-201ENST00000635058 A0A1W2PP64 1363 aa13.96□□□□□ -0.17
RHOXF1P3-201ENST00000635058 TNS1Q9HBL0 1735 aaKnown RBP13.96□□□□□ -0.17
RHOXF1P3-201ENST00000635058 CDCA8Q53HL2 280 aa13.96□□□□□ -0.17
RHOXF1P3-201ENST00000635058 IP6K1Q92551 441 aa13.96□□□□□ -0.17
RHOXF1P3-201ENST00000635058 LRP5O75197 1615 aa13.96□□□□□ -0.17
RHOXF1P3-201ENST00000635058 BCL9O00512 1426 aa13.96□□□□□ -0.18
RHOXF1P3-201ENST00000635058 PARP4Q9UKK3 1724 aaKnown RBP13.95□□□□□ -0.18
RHOXF1P3-201ENST00000635058 CD163L1Q9NR16 1453 aa13.95□□□□□ -0.18
RHOXF1P3-201ENST00000635058 KCNQ2O43526 872 aa13.95□□□□□ -0.18
RHOXF1P3-201ENST00000635058 AMPHP49418 695 aa13.95□□□□□ -0.18
RHOXF1P3-201ENST00000635058 NFAT5O94916 1531 aa13.95□□□□□ -0.18
RHOXF1P3-201ENST00000635058 COL18A1P39060 1754 aa13.94□□□□□ -0.18
RHOXF1P3-201ENST00000635058 AKAP12Q02952 1782 aa13.94□□□□□ -0.18
RHOXF1P3-201ENST00000635058 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
RHOXF1P3-201ENST00000635058 PTF1AQ7RTS3 328 aa13.94□□□□□ -0.18
RHOXF1P3-201ENST00000635058 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
RHOXF1P3-201ENST00000635058 ABCC6O95255 1503 aa13.94□□□□□ -0.18
RHOXF1P3-201ENST00000635058 TXNRD1Q16881 649 aa13.93□□□□□ -0.18
RHOXF1P3-201ENST00000635058 STK32BQ9NY57 414 aa13.93□□□□□ -0.18
RHOXF1P3-201ENST00000635058 TIMELESSQ9UNS1 1208 aa13.93□□□□□ -0.18
RHOXF1P3-201ENST00000635058 PROM2Q8N271 834 aa13.92□□□□□ -0.18
RHOXF1P3-201ENST00000635058 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
RHOXF1P3-201ENST00000635058 DDX54Q8TDD1 881 aaKnown RBP13.91□□□□□ -0.18
RHOXF1P3-201ENST00000635058 TNS2Q63HR2 1409 aa13.9□□□□□ -0.18
RHOXF1P3-201ENST00000635058 ANKRD36BQ8N2N9 1353 aa13.9□□□□□ -0.18
RHOXF1P3-201ENST00000635058 USP47Q96K76 1375 aa13.9□□□□□ -0.18
RHOXF1P3-201ENST00000635058 MON2Q7Z3U7 1717 aa13.9□□□□□ -0.18
RHOXF1P3-201ENST00000635058 LRRC37A3O60309 1634 aa13.9□□□□□ -0.19
RHOXF1P3-201ENST00000635058 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.19
RHOXF1P3-201ENST00000635058 HOXC9P31274 260 aa13.89□□□□□ -0.19
RHOXF1P3-201ENST00000635058 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
RHOXF1P3-201ENST00000635058 ANO8Q9HCE9 1232 aaPredicted RBP13.89□□□□□ -0.19
RHOXF1P3-201ENST00000635058 PEAK1Q9H792 1746 aa13.88□□□□□ -0.19
RHOXF1P3-201ENST00000635058 FYB1O15117 783 aa13.88□□□□□ -0.19
RHOXF1P3-201ENST00000635058 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
RHOXF1P3-201ENST00000635058 GGNBP2Q9H3C7 697 aa13.88□□□□□ -0.19
RHOXF1P3-201ENST00000635058 FBLN1P23142 703 aa13.87□□□□□ -0.19
RHOXF1P3-201ENST00000635058 RREB1Q92766 1687 aa13.86□□□□□ -0.19
RHOXF1P3-201ENST00000635058 ZBTB7AO95365 584 aa13.86□□□□□ -0.19
RHOXF1P3-201ENST00000635058 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
RHOXF1P3-201ENST00000635058 CLSPNQ9HAW4 1339 aa13.86□□□□□ -0.19
RHOXF1P3-201ENST00000635058 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
RHOXF1P3-201ENST00000635058 RAPGEF4Q8WZA2 1011 aa13.85□□□□□ -0.19
RHOXF1P3-201ENST00000635058 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
RHOXF1P3-201ENST00000635058 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
RHOXF1P3-201ENST00000635058 RGPD5Q99666 1765 aa13.85□□□□□ -0.19
RHOXF1P3-201ENST00000635058 NUP188Q5SRE5 1749 aa13.84□□□□□ -0.19
RHOXF1P3-201ENST00000635058 SLC27A3Q5K4L6 730 aa13.84□□□□□ -0.19
RHOXF1P3-201ENST00000635058 CGNL1Q0VF96 1302 aa13.84□□□□□ -0.19
RHOXF1P3-201ENST00000635058 SMG6Q86US8 1419 aaKnown RBP13.83□□□□□ -0.2
RHOXF1P3-201ENST00000635058 USP54Q70EL1 1684 aa13.83□□□□□ -0.2
RHOXF1P3-201ENST00000635058 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
RHOXF1P3-201ENST00000635058 PDGFDQ9GZP0 370 aaPredicted RBP13.83□□□□□ -0.2
RHOXF1P3-201ENST00000635058 MTFR1LQ9H019 292 aa13.83□□□□□ -0.2
RHOXF1P3-201ENST00000635058 RTL1A6NKG5 1358 aa13.83□□□□□ -0.2
RHOXF1P3-201ENST00000635058 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
RHOXF1P3-201ENST00000635058 NBPF6Q5VWK0 638 aa13.82□□□□□ -0.2
RHOXF1P3-201ENST00000635058 NBPF4Q96M43 638 aa13.82□□□□□ -0.2
RHOXF1P3-201ENST00000635058 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
RHOXF1P3-201ENST00000635058 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
RHOXF1P3-201ENST00000635058 SBF2Q86WG5 1849 aa13.81□□□□□ -0.2
RHOXF1P3-201ENST00000635058 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
RHOXF1P3-201ENST00000635058 YY1P25490 414 aa13.8□□□□□ -0.2
RHOXF1P3-201ENST00000635058 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
RHOXF1P3-201ENST00000635058 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
RHOXF1P3-201ENST00000635058 LTN1O94822 1766 aa13.8□□□□□ -0.2
RHOXF1P3-201ENST00000635058 WNK3Q9BYP7 1800 aa13.79□□□□□ -0.2
RHOXF1P3-201ENST00000635058 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
RHOXF1P3-201ENST00000635058 PTGER2P43116 358 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms