RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC9-216ENST00000634178 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
TRAPPC9-216ENST00000634178 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
TRAPPC9-216ENST00000634178 NOVA2Q9UNW9 492 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-216ENST00000634178 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
TRAPPC9-216ENST00000634178 ADH1BP00325 375 aa8.51□□□□□ -1.05
TRAPPC9-216ENST00000634178 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-216ENST00000634178 PDZRN3Q9UPQ7 1066 aa8.51□□□□□ -1.05
TRAPPC9-216ENST00000634178 COPS2P61201 443 aa8.5□□□□□ -1.05
TRAPPC9-216ENST00000634178 ZNF787Q6DD87 383 aa8.5□□□□□ -1.05
TRAPPC9-216ENST00000634178 TRIM50Q86XT4 487 aa8.5□□□□□ -1.05
TRAPPC9-216ENST00000634178 RGS22Q8NE09 1264 aa8.5□□□□□ -1.05
TRAPPC9-216ENST00000634178 CCER1Q8TC90 406 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC9-216ENST00000634178 GNEQ9Y223 722 aaKnown RBP8.5□□□□□ -1.05
TRAPPC9-216ENST00000634178 IVNS1ABPQ9Y6Y0 642 aa8.5□□□□□ -1.05
TRAPPC9-216ENST00000634178 ZPR1O75312 459 aa8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 EML3Q32P44 896 aa8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 DZIP3Q86Y13 1208 aaKnown RBP8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 PLPP7Q8NBV4 271 aa8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 ZNF775Q96BV0 537 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L15C9J2P7 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L13C9JLJ4 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L12C9JPN9 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L11C9JVI0 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L21D6R901 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L18D6R9N7 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L22D6RA61 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L17D6RBQ6 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L19D6RCP7 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L20D6RJB6 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 RASA1P20936 1047 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 ATP1A2P50993 1020 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 USP17L24Q0WX57 530 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 CCDC125Q86Z20 511 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 FAM174AQ8TBP5 190 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 EMID1Q96A84 441 aaPredicted RBP8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 UNC93B1Q9H1C4 597 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 NACADO15069 1562 aa8.48□□□□□ -1.05
TRAPPC9-216ENST00000634178 CARNS1A5YM72 827 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 NCOA4Q13772 614 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 CCDC27Q2M243 656 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 TMEM164Q5U3C3 297 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 RNF20Q5VTR2 975 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 SND1Q7KZF4 910 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 PHTF2Q8N3S3 785 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 ZMIZ1Q9ULJ6 1067 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 NOD1Q9Y239 953 aa8.47□□□□□ -1.05
TRAPPC9-216ENST00000634178 SLC6A16Q9GZN6 736 aa8.46□□□□□ -1.06
TRAPPC9-216ENST00000634178 CHIC2Q9UKJ5 165 aa8.46□□□□□ -1.06
TRAPPC9-216ENST00000634178 RBM19Q9Y4C8 960 aaKnown RBP8.46□□□□□ -1.06
TRAPPC9-216ENST00000634178 PTK7Q13308 1070 aa8.45□□□□□ -1.06
TRAPPC9-216ENST00000634178 SH3BP5LQ7L8J4 393 aa8.45□□□□□ -1.06
TRAPPC9-216ENST00000634178 BPHLQ86WA6 291 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC9-216ENST00000634178 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
TRAPPC9-216ENST00000634178 SIRT1Q96EB6 747 aa8.45□□□□□ -1.06
TRAPPC9-216ENST00000634178 OCSTAMPQ9BR26 566 aa8.45□□□□□ -1.06
TRAPPC9-216ENST00000634178 PRDM9Q9NQV7 894 aa8.45□□□□□ -1.06
TRAPPC9-216ENST00000634178 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC9-216ENST00000634178 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
TRAPPC9-216ENST00000634178 AGERQ15109 404 aa8.43□□□□□ -1.06
TRAPPC9-216ENST00000634178 SWI5Q1ZZU3 235 aa8.43□□□□□ -1.06
TRAPPC9-216ENST00000634178 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC9-216ENST00000634178 LARGE2Q8N3Y3 721 aa8.43□□□□□ -1.06
TRAPPC9-216ENST00000634178 CDV3Q9UKY7 258 aaKnown RBP8.43□□□□□ -1.06
TRAPPC9-216ENST00000634178 DOLKQ9UPQ8 538 aa8.43□□□□□ -1.06
TRAPPC9-216ENST00000634178 MAGEB6P1A0A0J9YX57 407 aa8.42□□□□□ -1.06
TRAPPC9-216ENST00000634178 TLL1O43897 1013 aa8.42□□□□□ -1.06
TRAPPC9-216ENST00000634178 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
TRAPPC9-216ENST00000634178 CLP1Q92989 425 aaKnown RBP8.42□□□□□ -1.06
TRAPPC9-216ENST00000634178 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
TRAPPC9-216ENST00000634178 NBPF20Q3BBV1 942 aa8.41□□□□□ -1.06
TRAPPC9-216ENST00000634178 SH3RF1Q7Z6J0 888 aa8.41□□□□□ -1.06
TRAPPC9-216ENST00000634178 TRIM52Q96A61 297 aa8.41□□□□□ -1.06
TRAPPC9-216ENST00000634178 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
TRAPPC9-216ENST00000634178 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
TRAPPC9-216ENST00000634178 AMOTL2Q9Y2J4 779 aa8.41□□□□□ -1.06
TRAPPC9-216ENST00000634178 SSFA2P28290 1259 aa8.4□□□□□ -1.06
TRAPPC9-216ENST00000634178 GGCXP38435 758 aa8.4□□□□□ -1.06
TRAPPC9-216ENST00000634178 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC9-216ENST00000634178 TXNDC2Q86VQ3 553 aa8.4□□□□□ -1.06
TRAPPC9-216ENST00000634178 RNF223E7ERA6 249 aa8.39□□□□□ -1.07
TRAPPC9-216ENST00000634178 DPYDQ12882 1025 aa8.39□□□□□ -1.07
TRAPPC9-216ENST00000634178 USP4Q13107 963 aa8.39□□□□□ -1.07
TRAPPC9-216ENST00000634178 ERFEQ4G0M1 354 aa8.39□□□□□ -1.07
TRAPPC9-216ENST00000634178 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
TRAPPC9-216ENST00000634178 BAP1Q92560 729 aa8.39□□□□□ -1.07
TRAPPC9-216ENST00000634178 UNC13AQ9UPW8 1703 aa8.38□□□□□ -1.07
TRAPPC9-216ENST00000634178 POTECB2RU33 542 aa8.38□□□□□ -1.07
TRAPPC9-216ENST00000634178 ATP2B4P23634 1241 aa8.38□□□□□ -1.07
TRAPPC9-216ENST00000634178 MYT1Q01538 1121 aa8.38□□□□□ -1.07
TRAPPC9-216ENST00000634178 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
TRAPPC9-216ENST00000634178 ZNF511Q8NB15 262 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms