RNA–Protein interactions for RNA: ENST00000633364.1

LIMS4-205, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 957 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-205ENST00000633364 CSB-PGBD3P0DP91 1061 aa21.67■■□□□ 1.06
LIMS4-205ENST00000633364 FAM182BQ5T319 152 aa21.67■■□□□ 1.06
LIMS4-205ENST00000633364 CRB1P82279 1406 aa21.65■■□□□ 1.06
LIMS4-205ENST00000633364 USP31Q70CQ4 1352 aa21.65■■□□□ 1.06
LIMS4-205ENST00000633364 THSD7AQ9UPZ6 1657 aa21.64■■□□□ 1.05
LIMS4-205ENST00000633364 AXIN2Q9Y2T1 843 aa21.64■■□□□ 1.05
LIMS4-205ENST00000633364 BAG6P46379 1132 aa21.62■■□□□ 1.05
LIMS4-205ENST00000633364 DEFB132Q7Z7B7 95 aa21.62■■□□□ 1.05
LIMS4-205ENST00000633364 WDR17Q8IZU2 1322 aa21.61■■□□□ 1.05
LIMS4-205ENST00000633364 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
LIMS4-205ENST00000633364 COG3Q96JB2 828 aa21.61■■□□□ 1.05
LIMS4-205ENST00000633364 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
LIMS4-205ENST00000633364 NFAT5O94916 1531 aa21.59■■□□□ 1.05
LIMS4-205ENST00000633364 COL18A1P39060 1754 aa21.59■■□□□ 1.05
LIMS4-205ENST00000633364 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
LIMS4-205ENST00000633364 EIF4G2P78344 907 aaKnown RBP eCLIP21.56■■□□□ 1.04
LIMS4-205ENST00000633364 DDB1Q16531 1140 aa21.56■■□□□ 1.04
LIMS4-205ENST00000633364 CDCA7Q9BWT1 371 aaPredicted RBP21.56■■□□□ 1.04
LIMS4-205ENST00000633364 CARD10Q9BWT7 1032 aa21.56■■□□□ 1.04
LIMS4-205ENST00000633364 RGPD5Q99666 1765 aa21.56■■□□□ 1.04
LIMS4-205ENST00000633364 TRIM37O94972 964 aa21.55■■□□□ 1.04
LIMS4-205ENST00000633364 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
LIMS4-205ENST00000633364 NLRP2Q9NX02 1062 aa21.54■■□□□ 1.04
LIMS4-205ENST00000633364 OVOS2A0A0J9YW53 1432 aa21.54■■□□□ 1.04
LIMS4-205ENST00000633364 OVOS2Q6IE36 1432 aa21.54■■□□□ 1.04
LIMS4-205ENST00000633364 RGPD1P0DJD0 1748 aa21.53■■□□□ 1.04
LIMS4-205ENST00000633364 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
LIMS4-205ENST00000633364 ABCC6O95255 1503 aa21.53■■□□□ 1.04
LIMS4-205ENST00000633364 EN1Q05925 392 aaPredicted RBP21.52■■□□□ 1.04
LIMS4-205ENST00000633364 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
LIMS4-205ENST00000633364 LTN1O94822 1766 aa21.51■■□□□ 1.03
LIMS4-205ENST00000633364 CCDC7Q96M83 1385 aa21.51■■□□□ 1.03
LIMS4-205ENST00000633364 APBA3O96018 575 aa21.51■■□□□ 1.03
LIMS4-205ENST00000633364 AMPHP49418 695 aa21.51■■□□□ 1.03
LIMS4-205ENST00000633364 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
LIMS4-205ENST00000633364 ERBB3P21860 1342 aa21.51■■□□□ 1.03
LIMS4-205ENST00000633364 PARP4Q9UKK3 1724 aaKnown RBP21.5■■□□□ 1.03
LIMS4-205ENST00000633364 EXOC5O00471 708 aa21.5■■□□□ 1.03
LIMS4-205ENST00000633364 HSPA5P11021 654 aaKnown RBP21.5■■□□□ 1.03
LIMS4-205ENST00000633364 FYB1O15117 783 aa21.49■■□□□ 1.03
LIMS4-205ENST00000633364 IP6K1Q92551 441 aa21.49■■□□□ 1.03
LIMS4-205ENST00000633364 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
LIMS4-205ENST00000633364 OVOS2A0A0G2JMS6 1433 aa21.47■■□□□ 1.03
LIMS4-205ENST00000633364 FBLN1P23142 703 aa21.46■■□□□ 1.03
LIMS4-205ENST00000633364 MAP3K19Q56UN5 1328 aa21.46■■□□□ 1.03
LIMS4-205ENST00000633364 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
LIMS4-205ENST00000633364 LRRC37A3O60309 1634 aa21.44■■□□□ 1.02
LIMS4-205ENST00000633364 IL2RBP14784 551 aa21.44■■□□□ 1.02
LIMS4-205ENST00000633364 NSD3Q9BZ95 1437 aa21.44■■□□□ 1.02
LIMS4-205ENST00000633364 HOXC9P31274 260 aa21.43■■□□□ 1.02
LIMS4-205ENST00000633364 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
LIMS4-205ENST00000633364 CARD14Q9BXL6 1004 aa21.43■■□□□ 1.02
LIMS4-205ENST00000633364 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
LIMS4-205ENST00000633364 DISP2A7MBM2 1401 aa21.42■■□□□ 1.02
LIMS4-205ENST00000633364 MARCH10Q8NA82 808 aaPredicted RBP21.42■■□□□ 1.02
LIMS4-205ENST00000633364 TNS1Q9HBL0 1735 aaKnown RBP21.42■■□□□ 1.02
LIMS4-205ENST00000633364 MYOM1P52179 1685 aa21.41■■□□□ 1.02
LIMS4-205ENST00000633364 CGNL1Q0VF96 1302 aa21.41■■□□□ 1.02
LIMS4-205ENST00000633364 CAMKK2Q96RR4 588 aa21.41■■□□□ 1.02
LIMS4-205ENST00000633364 KIF20BQ96Q89 1820 aa21.41■■□□□ 1.02
LIMS4-205ENST00000633364 PARD3Q8TEW0 1356 aa21.39■■□□□ 1.02
LIMS4-205ENST00000633364 PSDA5PKW4 1024 aaPredicted RBP21.39■■□□□ 1.01
LIMS4-205ENST00000633364 RTL1A6NKG5 1358 aa21.38■■□□□ 1.01
LIMS4-205ENST00000633364 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
LIMS4-205ENST00000633364 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
LIMS4-205ENST00000633364 BCL11BQ9C0K0 894 aaPredicted RBP21.37■■□□□ 1.01
LIMS4-205ENST00000633364 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
LIMS4-205ENST00000633364 NBPF14Q5TI25 921 aa21.36■■□□□ 1.01
LIMS4-205ENST00000633364 FAM208AQ9UK61 1670 aaKnown RBP21.35■■□□□ 1.01
LIMS4-205ENST00000633364 PANK3Q9H999 370 aa21.35■■□□□ 1.01
LIMS4-205ENST00000633364 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
LIMS4-205ENST00000633364 R3HDM1Q15032 1099 aaKnown RBP21.34■■□□□ 1.01
LIMS4-205ENST00000633364 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1.01
LIMS4-205ENST00000633364 FLT4P35916 1363 aa21.33■■□□□ 1
LIMS4-205ENST00000633364 HSP90AB2PQ58FF8 381 aa21.32■■□□□ 1
LIMS4-205ENST00000633364 ACSBG1Q96GR2 724 aa21.32■■□□□ 1
LIMS4-205ENST00000633364 BCL9O00512 1426 aa21.31■■□□□ 1
LIMS4-205ENST00000633364 PLSCR1O15162 318 aa21.31■■□□□ 1
LIMS4-205ENST00000633364 EMILIN1Q9Y6C2 1016 aa21.31■■□□□ 1
LIMS4-205ENST00000633364 KIF24Q5T7B8 1368 aa21.31■■□□□ 1
LIMS4-205ENST00000633364 SBF2Q86WG5 1849 aa21.31■■□□□ 1
LIMS4-205ENST00000633364 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
LIMS4-205ENST00000633364 NBPF6Q5VWK0 638 aa21.3■■□□□ 1
LIMS4-205ENST00000633364 PTF1AQ7RTS3 328 aa21.3■■□□□ 1
LIMS4-205ENST00000633364 RAPGEF4Q8WZA2 1011 aa21.3■■□□□ 1
LIMS4-205ENST00000633364 NBPF4Q96M43 638 aa21.3■■□□□ 1
LIMS4-205ENST00000633364 INSRP06213 1382 aa21.3■■□□□ 1
LIMS4-205ENST00000633364 USHBP1Q8N6Y0 703 aa21.28■■□□□ 1
LIMS4-205ENST00000633364 ZCRB1Q8TBF4 217 aaKnown RBP21.28■■□□□ 1
LIMS4-205ENST00000633364 KAT6BQ8WYB5 2073 aa21.28■■□□□ 1
LIMS4-205ENST00000633364 KCNQ2O43526 872 aa21.27■■□□□ 1
LIMS4-205ENST00000633364 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
LIMS4-205ENST00000633364 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
LIMS4-205ENST00000633364 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
LIMS4-205ENST00000633364 RREB1Q92766 1687 aa21.25■□□□□ 0.99
LIMS4-205ENST00000633364 MORC1Q86VD1 984 aa21.24■□□□□ 0.99
LIMS4-205ENST00000633364 SYTL4Q96C24 671 aaPredicted RBP21.24■□□□□ 0.99
LIMS4-205ENST00000633364 SRCAPQ6ZRS2 3230 aa21.24■□□□□ 0.99
LIMS4-205ENST00000633364 POLKQ9UBT6 870 aa21.23■□□□□ 0.99
LIMS4-205ENST00000633364 NUP188Q5SRE5 1749 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms