RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 SMG6Q86US8 1419 aaKnown RBP26.21■■□□□ 1.79
SKIDA1-204ENST00000633225 PARD3Q8TEW0 1356 aa26.21■■□□□ 1.79
SKIDA1-204ENST00000633225 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.21■■□□□ 1.79
SKIDA1-204ENST00000633225 POLKQ9UBT6 870 aa26.2■■□□□ 1.78
SKIDA1-204ENST00000633225 BTG4Q9NY30 223 aa26.19■■□□□ 1.78
SKIDA1-204ENST00000633225 RTL1A6NKG5 1358 aa26.19■■□□□ 1.78
SKIDA1-204ENST00000633225 RGS17Q9UGC6 210 aaPredicted RBP26.18■■□□□ 1.78
SKIDA1-204ENST00000633225 COL5A2P05997 1499 aaPredicted RBP26.18■■□□□ 1.78
SKIDA1-204ENST00000633225 HOXC9P31274 260 aa26.17■■□□□ 1.78
SKIDA1-204ENST00000633225 IP6K1Q92551 441 aa26.16■■□□□ 1.78
SKIDA1-204ENST00000633225 USP21Q9UK80 565 aa26.15■■□□□ 1.78
SKIDA1-204ENST00000633225 FLT4P35916 1363 aa26.15■■□□□ 1.78
SKIDA1-204ENST00000633225 KIF24Q5T7B8 1368 aa26.15■■□□□ 1.78
SKIDA1-204ENST00000633225 BLMP54132 1417 aaPredicted RBP26.14■■□□□ 1.78
SKIDA1-204ENST00000633225 AMPHP49418 695 aa26.14■■□□□ 1.78
SKIDA1-204ENST00000633225 UNC5CLQ8IV45 518 aa26.14■■□□□ 1.78
SKIDA1-204ENST00000633225 ATRNO75882 1429 aa26.13■■□□□ 1.77
SKIDA1-204ENST00000633225 CDK12Q9NYV4 1490 aaPredicted RBP26.12■■□□□ 1.77
SKIDA1-204ENST00000633225 PPM1GO15355 546 aaPredicted RBP26.11■■□□□ 1.77
SKIDA1-204ENST00000633225 HSP90AB2PQ58FF8 381 aa26.11■■□□□ 1.77
SKIDA1-204ENST00000633225 PHF23Q9BUL5 403 aaPredicted RBP26.11■■□□□ 1.77
SKIDA1-204ENST00000633225 ERBB3P21860 1342 aa26.11■■□□□ 1.77
SKIDA1-204ENST00000633225 INSRP06213 1382 aa26.1■■□□□ 1.77
SKIDA1-204ENST00000633225 PPP2R1AP30153 589 aa26.1■■□□□ 1.77
SKIDA1-204ENST00000633225 STRN4Q9NRL3 753 aa26.1■■□□□ 1.77
SKIDA1-204ENST00000633225 MTHFSP49914 203 aa26.09■■□□□ 1.77
SKIDA1-204ENST00000633225 PRKRIP1Q9H875 184 aaPredicted RBP26.09■■□□□ 1.77
SKIDA1-204ENST00000633225 RALBP1Q15311 655 aa26.08■■□□□ 1.77
SKIDA1-204ENST00000633225 ZNF772Q68DY9 489 aaPredicted RBP26.08■■□□□ 1.77
SKIDA1-204ENST00000633225 LARP1Q6PKG0 1096 aaKnown RBP26.08■■□□□ 1.77
SKIDA1-204ENST00000633225 ANKRD24Q8TF21 1146 aa26.07■■□□□ 1.76
SKIDA1-204ENST00000633225 RGPD2P0DJD1 1756 aa26.07■■□□□ 1.76
SKIDA1-204ENST00000633225 COL3A1P02461 1466 aaPredicted RBP26.06■■□□□ 1.76
SKIDA1-204ENST00000633225 WDR17Q8IZU2 1322 aa26.06■■□□□ 1.76
SKIDA1-204ENST00000633225 GLI3P10071 1580 aa26.06■■□□□ 1.76
SKIDA1-204ENST00000633225 FAM208AQ9UK61 1670 aaKnown RBP26.06■■□□□ 1.76
SKIDA1-204ENST00000633225 VPS72Q15906 364 aa26.05■■□□□ 1.76
SKIDA1-204ENST00000633225 POTEAQ6S8J7 498 aa26.05■■□□□ 1.76
SKIDA1-204ENST00000633225 LTV1Q96GA3 475 aaPredicted RBP26.04■■□□□ 1.76
SKIDA1-204ENST00000633225 EVA1CP58658 441 aa26.04■■□□□ 1.76
SKIDA1-204ENST00000633225 QTRT2Q9H974 415 aaKnown RBP26.04■■□□□ 1.76
SKIDA1-204ENST00000633225 TRPC5Q9UL62 973 aaPredicted RBP26.04■■□□□ 1.76
SKIDA1-204ENST00000633225 CRB1P82279 1406 aa26.03■■□□□ 1.76
SKIDA1-204ENST00000633225 SPATA31A5Q5VU36 1347 aa26.02■■□□□ 1.76
SKIDA1-204ENST00000633225 SPATA31A7Q8IWB4 1347 aa26.02■■□□□ 1.76
SKIDA1-204ENST00000633225 EIF4A2Q14240 407 aaKnown RBP26.01■■□□□ 1.75
SKIDA1-204ENST00000633225 SPATA31A1Q5TZJ5 1347 aa26■■□□□ 1.75
SKIDA1-204ENST00000633225 MYBBP1AQ9BQG0 1328 aaKnown RBP26■■□□□ 1.75
SKIDA1-204ENST00000633225 CSB-PGBD3P0DP91 1061 aa26■■□□□ 1.75
SKIDA1-204ENST00000633225 TOM1L2Q6ZVM7 507 aa25.98■■□□□ 1.75
SKIDA1-204ENST00000633225 GJD4Q96KN9 370 aaPredicted RBP25.98■■□□□ 1.75
SKIDA1-204ENST00000633225 RGPD1P0DJD0 1748 aa25.98■■□□□ 1.75
SKIDA1-204ENST00000633225 WNK3Q9BYP7 1800 aa25.97■■□□□ 1.75
SKIDA1-204ENST00000633225 NBPF6Q5VWK0 638 aa25.97■■□□□ 1.75
SKIDA1-204ENST00000633225 NBPF4Q96M43 638 aa25.97■■□□□ 1.75
SKIDA1-204ENST00000633225 USP35Q9P2H5 1018 aa25.97■■□□□ 1.75
SKIDA1-204ENST00000633225 CCDC9Q9Y3X0 531 aaKnown RBP25.97■■□□□ 1.75
SKIDA1-204ENST00000633225 NCAPD2Q15021 1401 aa25.96■■□□□ 1.75
SKIDA1-204ENST00000633225 ANP32CO43423 234 aa25.96■■□□□ 1.75
SKIDA1-204ENST00000633225 IL13P35225 146 aa25.96■■□□□ 1.75
SKIDA1-204ENST00000633225 NLRP2Q9NX02 1062 aa25.96■■□□□ 1.75
SKIDA1-204ENST00000633225 CARD10Q9BWT7 1032 aa25.95■■□□□ 1.74
SKIDA1-204ENST00000633225 THSD7AQ9UPZ6 1657 aa25.94■■□□□ 1.74
SKIDA1-204ENST00000633225 RBM6P78332 1123 aaKnown RBP25.93■■□□□ 1.74
SKIDA1-204ENST00000633225 EYA1Q99502 592 aa25.93■■□□□ 1.74
SKIDA1-204ENST00000633225 TCP11L2Q8N4U5 519 aa25.92■■□□□ 1.74
SKIDA1-204ENST00000633225 USHBP1Q8N6Y0 703 aa25.92■■□□□ 1.74
SKIDA1-204ENST00000633225 DISP2A7MBM2 1401 aa25.92■■□□□ 1.74
SKIDA1-204ENST00000633225 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
SKIDA1-204ENST00000633225 DIAPH1O60610 1272 aaKnown RBP25.91■■□□□ 1.74
SKIDA1-204ENST00000633225 IGSF1Q8N6C5 1336 aa25.9■■□□□ 1.74
SKIDA1-204ENST00000633225 RXRBP28702 533 aa25.9■■□□□ 1.74
SKIDA1-204ENST00000633225 FAM98CQ17RN3 349 aaKnown RBP25.9■■□□□ 1.74
SKIDA1-204ENST00000633225 RGS12O14924 1447 aa25.89■■□□□ 1.74
SKIDA1-204ENST00000633225 BARGINQ6ZT62 677 aa25.89■■□□□ 1.73
SKIDA1-204ENST00000633225 CFAP53Q96M91 514 aa25.89■■□□□ 1.73
SKIDA1-204ENST00000633225 THRAP3Q9Y2W1 955 aaKnown RBP25.89■■□□□ 1.73
SKIDA1-204ENST00000633225 MEGF6O75095 1541 aa25.88■■□□□ 1.73
SKIDA1-204ENST00000633225 ONECUT3O60422 494 aaPredicted RBP25.87■■□□□ 1.73
SKIDA1-204ENST00000633225 PARP4Q9UKK3 1724 aaKnown RBP25.87■■□□□ 1.73
SKIDA1-204ENST00000633225 CCDC184Q52MB2 194 aa25.86■■□□□ 1.73
SKIDA1-204ENST00000633225 LRRC37A3O60309 1634 aa25.86■■□□□ 1.73
SKIDA1-204ENST00000633225 AEBP1Q8IUX7 1158 aa25.85■■□□□ 1.73
SKIDA1-204ENST00000633225 KDRP35968 1356 aa25.84■■□□□ 1.73
SKIDA1-204ENST00000633225 BRWD3Q6RI45 1802 aa25.83■■□□□ 1.73
SKIDA1-204ENST00000633225 IL2RBP14784 551 aa25.81■■□□□ 1.72
SKIDA1-204ENST00000633225 SEPT12Q8IYM1 358 aa25.81■■□□□ 1.72
SKIDA1-204ENST00000633225 OVOS2A0A0G2JMS6 1433 aa25.81■■□□□ 1.72
SKIDA1-204ENST00000633225 SHANK3Q9BYB0 1731 aa25.81■■□□□ 1.72
SKIDA1-204ENST00000633225 SULT6B1Q6IMI4 303 aa25.8■■□□□ 1.72
SKIDA1-204ENST00000633225 U2SURPO15042 1029 aaKnown RBP25.79■■□□□ 1.72
SKIDA1-204ENST00000633225 HMOX1P09601 288 aa25.79■■□□□ 1.72
SKIDA1-204ENST00000633225 PKD1L3Q7Z443 1732 aa25.78■■□□□ 1.72
SKIDA1-204ENST00000633225 TNS2Q63HR2 1409 aa25.78■■□□□ 1.72
SKIDA1-204ENST00000633225 A0A0G2JS52 829 aa25.77■■□□□ 1.72
SKIDA1-204ENST00000633225 MYT1Q01538 1121 aa25.77■■□□□ 1.72
SKIDA1-204ENST00000633225 CDCA7Q9BWT1 371 aaPredicted RBP25.77■■□□□ 1.72
SKIDA1-204ENST00000633225 NUDCQ9Y266 331 aa25.77■■□□□ 1.72
SKIDA1-204ENST00000633225 RAPGEF4Q8WZA2 1011 aa25.75■■□□□ 1.71
SKIDA1-204ENST00000633225 U2AF1L5P0DN76 240 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms