RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 IP6K1Q92551 441 aa11.31□□□□□ -0.6
MECP2-220ENST00000631210 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
MECP2-220ENST00000631210 COL14A1Q05707 1796 aaKnown RBP11.31□□□□□ -0.6
MECP2-220ENST00000631210 PLCH1Q4KWH8 1693 aa11.3□□□□□ -0.6
MECP2-220ENST00000631210 SLIT2O94813 1529 aa11.3□□□□□ -0.6
MECP2-220ENST00000631210 RTL1A6NKG5 1358 aa11.3□□□□□ -0.6
MECP2-220ENST00000631210 NRAPQ86VF7 1730 aa11.3□□□□□ -0.6
MECP2-220ENST00000631210 ANP32CO43423 234 aa11.3□□□□□ -0.6
MECP2-220ENST00000631210 ADAMTS2O95450 1211 aa11.3□□□□□ -0.6
MECP2-220ENST00000631210 HSP90AB2PQ58FF8 381 aa11.3□□□□□ -0.6
MECP2-220ENST00000631210 RGPD1P0DJD0 1748 aa11.29□□□□□ -0.6
MECP2-220ENST00000631210 FLT4P35916 1363 aa11.28□□□□□ -0.6
MECP2-220ENST00000631210 BCL9LQ86UU0 1499 aa11.28□□□□□ -0.6
MECP2-220ENST00000631210 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
MECP2-220ENST00000631210 PRDM11Q9NQV5 511 aa11.28□□□□□ -0.6
MECP2-220ENST00000631210 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
MECP2-220ENST00000631210 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.6
MECP2-220ENST00000631210 COL5A2P05997 1499 aaPredicted RBP11.27□□□□□ -0.6
MECP2-220ENST00000631210 NWD2Q9ULI1 1742 aa11.27□□□□□ -0.61
MECP2-220ENST00000631210 IL13P35225 146 aa11.27□□□□□ -0.61
MECP2-220ENST00000631210 EIF4A2Q14240 407 aaKnown RBP11.27□□□□□ -0.61
MECP2-220ENST00000631210 AMPHP49418 695 aa11.26□□□□□ -0.61
MECP2-220ENST00000631210 ERBB3P21860 1342 aa11.26□□□□□ -0.61
MECP2-220ENST00000631210 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
MECP2-220ENST00000631210 FAM208AQ9UK61 1670 aaKnown RBP11.25□□□□□ -0.61
MECP2-220ENST00000631210 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
MECP2-220ENST00000631210 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
MECP2-220ENST00000631210 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
MECP2-220ENST00000631210 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
MECP2-220ENST00000631210 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.25□□□□□ -0.61
MECP2-220ENST00000631210 RGS17Q9UGC6 210 aaPredicted RBP11.24□□□□□ -0.61
MECP2-220ENST00000631210 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
MECP2-220ENST00000631210 NBPF6Q5VWK0 638 aa11.23□□□□□ -0.61
MECP2-220ENST00000631210 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
MECP2-220ENST00000631210 NBPF4Q96M43 638 aa11.23□□□□□ -0.61
MECP2-220ENST00000631210 C8orf37Q96NL8 207 aa11.23□□□□□ -0.61
MECP2-220ENST00000631210 EYA1Q99502 592 aa11.23□□□□□ -0.61
MECP2-220ENST00000631210 WDR17Q8IZU2 1322 aa11.23□□□□□ -0.61
MECP2-220ENST00000631210 AFF2P51816 1311 aa11.22□□□□□ -0.61
MECP2-220ENST00000631210 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
MECP2-220ENST00000631210 UNC5CLQ8IV45 518 aa11.22□□□□□ -0.61
MECP2-220ENST00000631210 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
MECP2-220ENST00000631210 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
MECP2-220ENST00000631210 LTV1Q96GA3 475 aaPredicted RBP11.22□□□□□ -0.61
MECP2-220ENST00000631210 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
MECP2-220ENST00000631210 ATRNO75882 1429 aa11.21□□□□□ -0.61
MECP2-220ENST00000631210 KDRP35968 1356 aa11.21□□□□□ -0.61
MECP2-220ENST00000631210 DIAPH1O60610 1272 aaKnown RBP11.21□□□□□ -0.61
MECP2-220ENST00000631210 GLI3P10071 1580 aa11.2□□□□□ -0.62
MECP2-220ENST00000631210 CRB1P82279 1406 aa11.2□□□□□ -0.62
MECP2-220ENST00000631210 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
MECP2-220ENST00000631210 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
MECP2-220ENST00000631210 DISP2A7MBM2 1401 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 SPATA31A5Q5VU36 1347 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 SPATA31A7Q8IWB4 1347 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 VPS72Q15906 364 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 USHBP1Q8N6Y0 703 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 USP21Q9UK80 565 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
MECP2-220ENST00000631210 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
MECP2-220ENST00000631210 RSPH6AQ9H0K4 717 aa11.18□□□□□ -0.62
MECP2-220ENST00000631210 ADAMTS8Q9UP79 889 aa11.18□□□□□ -0.62
MECP2-220ENST00000631210 MEGF6O75095 1541 aa11.18□□□□□ -0.62
MECP2-220ENST00000631210 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
MECP2-220ENST00000631210 HMOX1P09601 288 aa11.16□□□□□ -0.62
MECP2-220ENST00000631210 EVA1CP58658 441 aa11.16□□□□□ -0.62
MECP2-220ENST00000631210 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
MECP2-220ENST00000631210 NLRP2Q9NX02 1062 aa11.16□□□□□ -0.62
MECP2-220ENST00000631210 THSD7AQ9UPZ6 1657 aa11.16□□□□□ -0.62
MECP2-220ENST00000631210 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
MECP2-220ENST00000631210 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
MECP2-220ENST00000631210 CSB-PGBD3P0DP91 1061 aa11.15□□□□□ -0.62
MECP2-220ENST00000631210 SULT6B1Q6IMI4 303 aa11.15□□□□□ -0.62
MECP2-220ENST00000631210 POTEAQ6S8J7 498 aa11.15□□□□□ -0.62
MECP2-220ENST00000631210 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.63
MECP2-220ENST00000631210 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
MECP2-220ENST00000631210 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
MECP2-220ENST00000631210 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
MECP2-220ENST00000631210 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
MECP2-220ENST00000631210 TCP11L2Q8N4U5 519 aa11.14□□□□□ -0.63
MECP2-220ENST00000631210 GJD4Q96KN9 370 aaPredicted RBP11.14□□□□□ -0.63
MECP2-220ENST00000631210 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
MECP2-220ENST00000631210 QTRT2Q9H974 415 aaKnown RBP11.14□□□□□ -0.63
MECP2-220ENST00000631210 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
MECP2-220ENST00000631210 PARP4Q9UKK3 1724 aaKnown RBP11.13□□□□□ -0.63
MECP2-220ENST00000631210 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
MECP2-220ENST00000631210 FCHSD2O94868 740 aa11.13□□□□□ -0.63
MECP2-220ENST00000631210 TRPC5Q9UL62 973 aaPredicted RBP11.13□□□□□ -0.63
MECP2-220ENST00000631210 LRRC37A3O60309 1634 aa11.13□□□□□ -0.63
MECP2-220ENST00000631210 PRKAR2BP31323 418 aa11.12□□□□□ -0.63
MECP2-220ENST00000631210 ZNF772Q68DY9 489 aaPredicted RBP11.12□□□□□ -0.63
MECP2-220ENST00000631210 USP35Q9P2H5 1018 aa11.12□□□□□ -0.63
MECP2-220ENST00000631210 THRAP3Q9Y2W1 955 aaKnown RBP11.12□□□□□ -0.63
MECP2-220ENST00000631210 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
MECP2-220ENST00000631210 IL2RBP14784 551 aa11.11□□□□□ -0.63
MECP2-220ENST00000631210 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms