RNA–Protein interactions for RNA: ENST00000630607.2

UBE3A-221, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-221ENST00000630607 TGIF2Q9GZN2 237 aa10.96□□□□□ -0.65
UBE3A-221ENST00000630607 IRF2BPLQ9H1B7 796 aa10.96□□□□□ -0.65
UBE3A-221ENST00000630607 USP17L3A6NCW0 530 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 USP17L4A6NCW7 530 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 PIK3CDO00329 1044 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 ZNF211Q13398 564 aaPredicted RBP10.95□□□□□ -0.66
UBE3A-221ENST00000630607 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 USP17L1Q7RTZ2 530 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 ABL1P00519 1130 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 DNAJA1P31689 397 aaKnown RBP10.95□□□□□ -0.66
UBE3A-221ENST00000630607 TNNI2P48788 182 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
UBE3A-221ENST00000630607 RNF187Q5TA31 235 aaPredicted RBP10.95□□□□□ -0.66
UBE3A-221ENST00000630607 RPUSD2Q8IZ73 545 aaKnown RBP10.95□□□□□ -0.66
UBE3A-221ENST00000630607 GMLQ99445 158 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 CCSER2Q9H7U1 834 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 PCDH12Q9NPG4 1184 aa10.95□□□□□ -0.66
UBE3A-221ENST00000630607 MRPL42Q9Y6G3 142 aaKnown RBP10.95□□□□□ -0.66
UBE3A-221ENST00000630607 GJA5P36382 358 aa10.94□□□□□ -0.66
UBE3A-221ENST00000630607 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
UBE3A-221ENST00000630607 ACBD3Q9H3P7 528 aa10.94□□□□□ -0.66
UBE3A-221ENST00000630607 ANO2Q9NQ90 1003 aa10.94□□□□□ -0.66
UBE3A-221ENST00000630607 PAX3P23760 479 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 HSD3B2P26439 372 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 CCDC146Q8IYE0 955 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 TMEM87AQ8NBN3 555 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 EGFL7Q9UHF1 273 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 DCTN4Q9UJW0 460 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 G3BP2Q9UN86 482 aaKnown RBP10.93□□□□□ -0.66
UBE3A-221ENST00000630607 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 HMGB1P1B2RPK0 211 aaPredicted RBP10.93□□□□□ -0.66
UBE3A-221ENST00000630607 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
UBE3A-221ENST00000630607 RAPGEF2Q9Y4G8 1499 aa10.93□□□□□ -0.66
UBE3A-221ENST00000630607 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
UBE3A-221ENST00000630607 MAP3K7O43318 606 aa10.92□□□□□ -0.66
UBE3A-221ENST00000630607 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
UBE3A-221ENST00000630607 ZSCAN29Q8IWY8 852 aaPredicted RBP10.92□□□□□ -0.66
UBE3A-221ENST00000630607 KIF12Q96FN5 646 aa10.92□□□□□ -0.66
UBE3A-221ENST00000630607 IFT57Q9NWB7 429 aa10.92□□□□□ -0.66
UBE3A-221ENST00000630607 PRXQ9BXM0 1461 aa10.92□□□□□ -0.66
UBE3A-221ENST00000630607 APLP1P51693 650 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 FANCCQ00597 558 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 LONRF3Q496Y0 759 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 FAM200AQ8TCP9 573 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 OSBPL2Q9H1P3 480 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 DHX57Q6P158 1386 aaKnown RBP10.91□□□□□ -0.66
UBE3A-221ENST00000630607 EVI5O60447 810 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 ICMTO60725 284 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 PTK7Q13308 1070 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 PRPF38BQ5VTL8 546 aaKnown RBP10.91□□□□□ -0.66
UBE3A-221ENST00000630607 FILIP1Q7Z7B0 1213 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 NUTM1Q86Y26 1132 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 GLYCTKQ8IVS8 523 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 STAG1Q8WVM7 1258 aa10.91□□□□□ -0.66
UBE3A-221ENST00000630607 C2orf72A6NCS6 295 aa10.9□□□□□ -0.66
UBE3A-221ENST00000630607 CD46P15529 392 aa10.9□□□□□ -0.66
UBE3A-221ENST00000630607 ECM1Q16610 540 aa10.9□□□□□ -0.66
UBE3A-221ENST00000630607 C1orf216Q8TAB5 229 aa10.9□□□□□ -0.66
UBE3A-221ENST00000630607 SH3BP5O60239 455 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 FAM161BQ96MY7 647 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 PRR12Q9ULL5 1215 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 HOXA2O43364 376 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 P4HBP07237 508 aaKnown RBP10.89□□□□□ -0.67
UBE3A-221ENST00000630607 TBX4P57082 545 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 ZFYVE27Q5T4F4 411 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 TSHZ1Q6ZSZ6 1077 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 DEPDC4Q8N2C3 294 aa10.89□□□□□ -0.67
UBE3A-221ENST00000630607 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
UBE3A-221ENST00000630607 MAP3K1Q13233 1512 aa10.88□□□□□ -0.67
UBE3A-221ENST00000630607 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
UBE3A-221ENST00000630607 ILDR1Q86SU0 546 aaPredicted RBP10.87□□□□□ -0.67
UBE3A-221ENST00000630607 RGL4Q8IZJ4 473 aa10.87□□□□□ -0.67
UBE3A-221ENST00000630607 FAM9BQ8IZU0 186 aa10.87□□□□□ -0.67
UBE3A-221ENST00000630607 MAF1Q9H063 256 aa10.87□□□□□ -0.67
UBE3A-221ENST00000630607 PNMA2Q9UL42 364 aa10.87□□□□□ -0.67
UBE3A-221ENST00000630607 FOXD4Q12950 439 aaPredicted RBP10.87□□□□□ -0.67
UBE3A-221ENST00000630607 MICALL2Q8IY33 904 aa10.87□□□□□ -0.67
UBE3A-221ENST00000630607 RNF34Q969K3 372 aa10.87□□□□□ -0.67
UBE3A-221ENST00000630607 DDX56Q9NY93 547 aaKnown RBP10.87□□□□□ -0.67
UBE3A-221ENST00000630607 ARAP1Q96P48 1450 aa10.86□□□□□ -0.67
UBE3A-221ENST00000630607 KIF3CO14782 793 aa10.86□□□□□ -0.67
UBE3A-221ENST00000630607 S100BP04271 92 aaPredicted RBP10.86□□□□□ -0.67
UBE3A-221ENST00000630607 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
UBE3A-221ENST00000630607 ARHGAP4P98171 946 aa10.86□□□□□ -0.67
UBE3A-221ENST00000630607 GNL2Q13823 731 aaKnown RBP10.86□□□□□ -0.67
UBE3A-221ENST00000630607 C4orf46Q504U0 113 aa10.86□□□□□ -0.67
UBE3A-221ENST00000630607 PLEKHM2Q8IWE5 1019 aa10.86□□□□□ -0.67
UBE3A-221ENST00000630607 CCAR1Q8IX12 1150 aaKnown RBP10.86□□□□□ -0.67
UBE3A-221ENST00000630607 ZBTB3Q9H5J0 574 aa10.86□□□□□ -0.67
UBE3A-221ENST00000630607 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
UBE3A-221ENST00000630607 PITPNM1O00562 1244 aa10.85□□□□□ -0.67
UBE3A-221ENST00000630607 RHBDL3P58872 404 aa10.85□□□□□ -0.67
UBE3A-221ENST00000630607 PADI6Q6TGC4 694 aa10.85□□□□□ -0.67
UBE3A-221ENST00000630607 NFATC2IPQ8NCF5 419 aa10.85□□□□□ -0.67
UBE3A-221ENST00000630607 METTL5Q9NRN9 209 aaKnown RBP10.85□□□□□ -0.67
UBE3A-221ENST00000630607 RASA1P20936 1047 aa10.85□□□□□ -0.67
UBE3A-221ENST00000630607 SWI5Q1ZZU3 235 aa10.85□□□□□ -0.67
UBE3A-221ENST00000630607 FMNL3Q8IVF7 1028 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms