RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 LRRCC1Q9C099 1032 aa13.94□□□□□ -0.18
SHPRH-211ENST00000629427 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.185e-10■■■■■ 39.2
SHPRH-211ENST00000629427 SEPT7Q16181 437 aaKnown RBP13.94□□□□□ -0.18
SHPRH-211ENST00000629427 SERPINC1P01008 464 aa13.94□□□□□ -0.18
SHPRH-211ENST00000629427 SPC24Q8NBT2 197 aa13.94□□□□□ -0.18
SHPRH-211ENST00000629427 CYP46A1Q9Y6A2 500 aa13.94□□□□□ -0.18
SHPRH-211ENST00000629427 ERLIN2O94905 339 aa13.93□□□□□ -0.18
SHPRH-211ENST00000629427 ZSCAN25Q6NSZ9 544 aa13.93□□□□□ -0.18
SHPRH-211ENST00000629427 TDO2P48775 406 aa13.93□□□□□ -0.18
SHPRH-211ENST00000629427 CCT4P50991 539 aaKnown RBP13.93□□□□□ -0.18
SHPRH-211ENST00000629427 JMYQ8N9B5 988 aa13.93□□□□□ -0.18
SHPRH-211ENST00000629427 TSPY26PQ9H489 355 aa13.93□□□□□ -0.18
SHPRH-211ENST00000629427 PRPF40AO75400 957 aaKnown RBP13.93□□□□□ -0.18
SHPRH-211ENST00000629427 ANKRD62A6NC57 917 aa13.93□□□□□ -0.18
SHPRH-211ENST00000629427 TSR2Q969E8 191 aaKnown RBP13.93□□□□□ -0.18
SHPRH-211ENST00000629427 ZNF76P36508 570 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 ANKRD1Q15327 319 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 PIBF1Q8WXW3 757 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
SHPRH-211ENST00000629427 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
SHPRH-211ENST00000629427 ME1P48163 572 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 PNISRQ8TF01 805 aaKnown RBP13.92□□□□□ -0.18
SHPRH-211ENST00000629427 PRDM11Q9NQV5 511 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 CABP1Q9NZU7 370 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 BRD4O60885 1362 aaPredicted RBP13.92□□□□□ -0.18
SHPRH-211ENST00000629427 SYNJ2O15056 1496 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 H0YHG0 523 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 CCDC191Q8NCU4 936 aa13.92□□□□□ -0.18
SHPRH-211ENST00000629427 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
SHPRH-211ENST00000629427 GCC1Q96CN9 775 aa13.91□□□□□ -0.18
SHPRH-211ENST00000629427 PPP2R1AP30153 589 aa13.91□□□□□ -0.18
SHPRH-211ENST00000629427 ZRSR2Q15696 482 aaKnown RBP13.91□□□□□ -0.18
SHPRH-211ENST00000629427 SEPT11Q9NVA2 429 aaKnown RBP13.91□□□□□ -0.18
SHPRH-211ENST00000629427 LRP2BPQ9P2M1 347 aa13.91□□□□□ -0.18
SHPRH-211ENST00000629427 SSBP05455 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
SHPRH-211ENST00000629427 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
SHPRH-211ENST00000629427 CCP110O43303 1012 aa13.91□□□□□ -0.18
SHPRH-211ENST00000629427 USP5P45974 858 aa13.91□□□□□ -0.18
SHPRH-211ENST00000629427 LUC7LQ9NQ29 371 aaKnown RBP13.91□□□□□ -0.18
SHPRH-211ENST00000629427 PPFIBP1Q86W92 1011 aa13.9□□□□□ -0.18
SHPRH-211ENST00000629427 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
SHPRH-211ENST00000629427 PDZRN3Q9UPQ7 1066 aa13.9□□□□□ -0.18
SHPRH-211ENST00000629427 AACSQ86V21 672 aa13.9□□□□□ -0.18
SHPRH-211ENST00000629427 SLC12A5Q9H2X9 1139 aa13.9□□□□□ -0.18
SHPRH-211ENST00000629427 TRAK2O60296 914 aa13.9□□□□□ -0.18
SHPRH-211ENST00000629427 RAI14Q9P0K7 980 aa13.9□□□□□ -0.18
SHPRH-211ENST00000629427 DACH1Q9UI36 760 aa13.9□□□□□ -0.19
SHPRH-211ENST00000629427 AXDND1Q5T1B0 1012 aaPredicted RBP13.89□□□□□ -0.19
SHPRH-211ENST00000629427 LRRC9Q6ZRR7 1453 aa13.89□□□□□ -0.19
SHPRH-211ENST00000629427 CALRP27797 417 aaKnown RBP13.89□□□□□ -0.19
SHPRH-211ENST00000629427 CCDC85AQ96PX6 553 aaPredicted RBP13.89□□□□□ -0.19
SHPRH-211ENST00000629427 UBAC1Q9BSL1 405 aa13.89□□□□□ -0.19
SHPRH-211ENST00000629427 NOL7Q9UMY1 257 aaKnown RBP13.89□□□□□ -0.19
SHPRH-211ENST00000629427 MBD3O95983 291 aa13.89□□□□□ -0.19
SHPRH-211ENST00000629427 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
SHPRH-211ENST00000629427 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
SHPRH-211ENST00000629427 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
SHPRH-211ENST00000629427 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
SHPRH-211ENST00000629427 RABEP1Q15276 862 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 SLC26A8Q96RN1 970 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 TNMDQ9H2S6 317 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 NCOA2Q15596 1464 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 KIF21BO75037 1637 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 IGHMBP2P38935 993 aaKnown RBP13.88□□□□□ -0.19
SHPRH-211ENST00000629427 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 SCAPERQ9BY12 1400 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 GOLGA6L10A6NI86 522 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 AEBP1Q8IUX7 1158 aa13.88□□□□□ -0.19
SHPRH-211ENST00000629427 BCAR3O75815 825 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 NEBLO76041 1014 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
SHPRH-211ENST00000629427 FANCIQ9NVI1 1328 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 MRE11P49959 708 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
SHPRH-211ENST00000629427 CWC27Q6UX04 472 aaKnown RBP13.87□□□□□ -0.19
SHPRH-211ENST00000629427 ANKRD18AQ8IVF6 992 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 STARD3NLO95772 234 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 CEP126Q9P2H0 1117 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 ABCF2Q9UG63 623 aa13.87□□□□□ -0.19
SHPRH-211ENST00000629427 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
SHPRH-211ENST00000629427 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
SHPRH-211ENST00000629427 FAM177A1Q8N128 213 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-211ENST00000629427 SUPT6HQ7KZ85 1726 aaKnown RBP13.86□□□□□ -0.19
SHPRH-211ENST00000629427 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-211ENST00000629427 DESP17661 470 aa13.86□□□□□ -0.19
SHPRH-211ENST00000629427 LARP1BQ659C4 914 aaKnown RBP13.86□□□□□ -0.19
SHPRH-211ENST00000629427 TMOD2Q9NZR1 351 aa13.86□□□□□ -0.19
SHPRH-211ENST00000629427 CDKL5O76039 1030 aa13.86□□□□□ -0.19
SHPRH-211ENST00000629427 IDH1O75874 414 aaKnown RBP13.86□□□□□ -0.19
SHPRH-211ENST00000629427 ZPR1O75312 459 aa13.86□□□□□ -0.19
SHPRH-211ENST00000629427 CWC15Q9P013 229 aaKnown RBP13.85□□□□□ -0.19
SHPRH-211ENST00000629427 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
SHPRH-211ENST00000629427 CCDC97Q96F63 343 aaPredicted RBP13.85□□□□□ -0.19
SHPRH-211ENST00000629427 IGF1RP08069 1367 aa13.85□□□□□ -0.19
SHPRH-211ENST00000629427 BLOC1S2Q6QNY1 142 aa13.85□□□□□ -0.19
SHPRH-211ENST00000629427 TSPYL1Q9H0U9 437 aa13.85□□□□□ -0.19
SHPRH-211ENST00000629427 ZNF652Q9Y2D9 606 aa13.84□□□□□ -0.19
SHPRH-211ENST00000629427 CENPHQ9H3R5 247 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms