RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
CHD2-218ENST00000629346 CDK19Q9BWU1 502 aa17.66■□□□□ 0.42
CHD2-218ENST00000629346 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
CHD2-218ENST00000629346 ITSN1Q15811 1721 aa17.66■□□□□ 0.42
CHD2-218ENST00000629346 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
CHD2-218ENST00000629346 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
CHD2-218ENST00000629346 USP19O94966 1318 aa17.65■□□□□ 0.42
CHD2-218ENST00000629346 POLR3AO14802 1390 aaPredicted RBP17.64■□□□□ 0.41
CHD2-218ENST00000629346 CCDC61Q9Y6R9 512 aa17.61■□□□□ 0.41
CHD2-218ENST00000629346 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
CHD2-218ENST00000629346 PLEKHG3A1L390 1219 aa17.59■□□□□ 0.41
CHD2-218ENST00000629346 DCAF11Q8TEB1 546 aa17.58■□□□□ 0.4
CHD2-218ENST00000629346 GOLGB1Q14789 3259 aaKnown RBP17.58■□□□□ 0.4
CHD2-218ENST00000629346 AATKQ6ZMQ8 1374 aa17.57■□□□□ 0.4
CHD2-218ENST00000629346 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
CHD2-218ENST00000629346 BCL9O00512 1426 aa17.56■□□□□ 0.4
CHD2-218ENST00000629346 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
CHD2-218ENST00000629346 SHANK3Q9BYB0 1731 aa17.56■□□□□ 0.4
CHD2-218ENST00000629346 EXOC5O00471 708 aa17.56■□□□□ 0.4
CHD2-218ENST00000629346 NLRP6P59044 892 aa17.56■□□□□ 0.4
CHD2-218ENST00000629346 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
CHD2-218ENST00000629346 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
CHD2-218ENST00000629346 WDR17Q8IZU2 1322 aa17.55■□□□□ 0.4
CHD2-218ENST00000629346 ZNF827Q17R98 1081 aa17.55■□□□□ 0.4
CHD2-218ENST00000629346 NLGN2Q8NFZ4 835 aa17.55■□□□□ 0.4
CHD2-218ENST00000629346 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
CHD2-218ENST00000629346 TOPAZ1Q8N9V7 1692 aa17.54■□□□□ 0.4
CHD2-218ENST00000629346 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
CHD2-218ENST00000629346 POLD1P28340 1107 aa17.53■□□□□ 0.4
CHD2-218ENST00000629346 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
CHD2-218ENST00000629346 SRPK2P78362 688 aaKnown RBP17.51■□□□□ 0.39
CHD2-218ENST00000629346 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
CHD2-218ENST00000629346 SOX12O15370 315 aa17.5■□□□□ 0.39
CHD2-218ENST00000629346 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHD2-218ENST00000629346 HSPA6P17066 643 aa17.5■□□□□ 0.39
CHD2-218ENST00000629346 CARD10Q9BWT7 1032 aa17.5■□□□□ 0.39
CHD2-218ENST00000629346 ZNF526Q8TF50 670 aaPredicted RBP17.49■□□□□ 0.39
CHD2-218ENST00000629346 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
CHD2-218ENST00000629346 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
CHD2-218ENST00000629346 GRIN3BO60391 1043 aa17.48■□□□□ 0.39
CHD2-218ENST00000629346 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
CHD2-218ENST00000629346 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
CHD2-218ENST00000629346 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
CHD2-218ENST00000629346 COL18A1P39060 1754 aa17.48■□□□□ 0.39
CHD2-218ENST00000629346 PAPPAQ13219 1627 aa17.47■□□□□ 0.39
CHD2-218ENST00000629346 SLIT3O75094 1523 aa17.47■□□□□ 0.39
CHD2-218ENST00000629346 USP6P35125 1406 aa17.46■□□□□ 0.39
CHD2-218ENST00000629346 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
CHD2-218ENST00000629346 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
CHD2-218ENST00000629346 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
CHD2-218ENST00000629346 AKT1S1Q96B36 256 aa17.45■□□□□ 0.38
CHD2-218ENST00000629346 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
CHD2-218ENST00000629346 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
CHD2-218ENST00000629346 TFCP2L1Q9NZI6 479 aa17.44■□□□□ 0.38
CHD2-218ENST00000629346 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
CHD2-218ENST00000629346 PNPLA7Q6ZV29 1317 aa17.44■□□□□ 0.38
CHD2-218ENST00000629346 RGPD5Q99666 1765 aa17.43■□□□□ 0.38
CHD2-218ENST00000629346 KCNQ4P56696 695 aa17.43■□□□□ 0.38
CHD2-218ENST00000629346 CCDC7Q96M83 1385 aa17.42■□□□□ 0.38
CHD2-218ENST00000629346 STAC3Q96MF2 364 aa17.41■□□□□ 0.38
CHD2-218ENST00000629346 BTAF1O14981 1849 aa17.41■□□□□ 0.38
CHD2-218ENST00000629346 MSH5O43196 834 aa17.4■□□□□ 0.38
CHD2-218ENST00000629346 KCNH5Q8NCM2 988 aa17.4■□□□□ 0.38
CHD2-218ENST00000629346 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
CHD2-218ENST00000629346 KAT6BQ8WYB5 2073 aa17.39■□□□□ 0.37
CHD2-218ENST00000629346 PIK3C2AO00443 1686 aa17.39■□□□□ 0.37
CHD2-218ENST00000629346 SLC27A3Q5K4L6 730 aa17.37■□□□□ 0.37
CHD2-218ENST00000629346 TRPM1Q7Z4N2 1603 aa17.36■□□□□ 0.37
CHD2-218ENST00000629346 IL2RBP14784 551 aa17.36■□□□□ 0.37
CHD2-218ENST00000629346 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
CHD2-218ENST00000629346 MSL1Q68DK7 614 aa17.36■□□□□ 0.37
CHD2-218ENST00000629346 ABCC6O95255 1503 aa17.36■□□□□ 0.37
CHD2-218ENST00000629346 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
CHD2-218ENST00000629346 CAPN15O75808 1086 aa17.35■□□□□ 0.37
CHD2-218ENST00000629346 CENPJQ9HC77 1338 aaPredicted RBP17.35■□□□□ 0.37
CHD2-218ENST00000629346 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
CHD2-218ENST00000629346 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
CHD2-218ENST00000629346 QSER1Q2KHR3 1735 aa17.33■□□□□ 0.37
CHD2-218ENST00000629346 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
CHD2-218ENST00000629346 WWC3Q9ULE0 1092 aa17.33■□□□□ 0.36
CHD2-218ENST00000629346 ADCY9O60503 1353 aa17.32■□□□□ 0.36
CHD2-218ENST00000629346 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
CHD2-218ENST00000629346 TUBGCP6Q96RT7 1819 aa17.32■□□□□ 0.36
CHD2-218ENST00000629346 APLP1P51693 650 aa17.31■□□□□ 0.36
CHD2-218ENST00000629346 QRICH2Q9H0J4 1663 aa17.3■□□□□ 0.36
CHD2-218ENST00000629346 ERBB3P21860 1342 aa17.3■□□□□ 0.36
CHD2-218ENST00000629346 KIF3CO14782 793 aa17.3■□□□□ 0.36
CHD2-218ENST00000629346 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
CHD2-218ENST00000629346 DNAJC5GQ8N7S2 189 aa17.29■□□□□ 0.36
CHD2-218ENST00000629346 NFAT5O94916 1531 aa17.29■□□□□ 0.36
CHD2-218ENST00000629346 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
CHD2-218ENST00000629346 ANKRD24Q8TF21 1146 aa17.28■□□□□ 0.36
CHD2-218ENST00000629346 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
CHD2-218ENST00000629346 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
CHD2-218ENST00000629346 CD2APQ9Y5K6 639 aa17.28■□□□□ 0.36
CHD2-218ENST00000629346 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
CHD2-218ENST00000629346 COL13A1Q5TAT6 717 aaPredicted RBP17.27■□□□□ 0.36
CHD2-218ENST00000629346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHD2-218ENST00000629346 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
CHD2-218ENST00000629346 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms