RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 OVOS2Q6IE36 1432 aa27.08■■□□□ 1.93
SMN2-215ENST00000628696 CSB-PGBD3P0DP91 1061 aa27.08■■□□□ 1.93
SMN2-215ENST00000628696 ARHGEF25Q86VW2 580 aa27.08■■□□□ 1.93
SMN2-215ENST00000628696 WDR17Q8IZU2 1322 aa27.08■■□□□ 1.93
SMN2-215ENST00000628696 CPSF1Q10570 1443 aaKnown RBP27.07■■□□□ 1.92
SMN2-215ENST00000628696 LRRC37A3O60309 1634 aa27.06■■□□□ 1.92
SMN2-215ENST00000628696 TTC21AQ8NDW8 1320 aa27.06■■□□□ 1.92
SMN2-215ENST00000628696 KTN1Q86UP2 1357 aaKnown RBP27.06■■□□□ 1.92
SMN2-215ENST00000628696 SBF2Q86WG5 1849 aa27.05■■□□□ 1.92
SMN2-215ENST00000628696 PEAK1Q9H792 1746 aa27.04■■□□□ 1.92
SMN2-215ENST00000628696 WNK3Q9BYP7 1800 aa27.02■■□□□ 1.92
SMN2-215ENST00000628696 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.02■■□□□ 1.92
SMN2-215ENST00000628696 CDCA7Q9BWT1 371 aaPredicted RBP27.02■■□□□ 1.92
SMN2-215ENST00000628696 MARCH10Q8NA82 808 aaPredicted RBP27.01■■□□□ 1.91
SMN2-215ENST00000628696 PTF1AQ7RTS3 328 aa27■■□□□ 1.91
SMN2-215ENST00000628696 CARD10Q9BWT7 1032 aa27■■□□□ 1.91
SMN2-215ENST00000628696 CARD11Q9BXL7 1154 aa26.99■■□□□ 1.91
SMN2-215ENST00000628696 BCL11BQ9C0K0 894 aaPredicted RBP26.99■■□□□ 1.91
SMN2-215ENST00000628696 PLSCR1O15162 318 aa26.98■■□□□ 1.91
SMN2-215ENST00000628696 TMC1Q8TDI8 760 aa26.98■■□□□ 1.91
SMN2-215ENST00000628696 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
SMN2-215ENST00000628696 NFAT5O94916 1531 aa26.96■■□□□ 1.91
SMN2-215ENST00000628696 EXOC5O00471 708 aa26.96■■□□□ 1.91
SMN2-215ENST00000628696 SPON1Q9HCB6 807 aa26.96■■□□□ 1.91
SMN2-215ENST00000628696 PPP1R1BQ9UD71 204 aaPredicted RBP26.96■■□□□ 1.91
SMN2-215ENST00000628696 RGPD3A6NKT7 1758 aaPredicted RBP26.94■■□□□ 1.9
SMN2-215ENST00000628696 RGPD4Q7Z3J3 1758 aa26.94■■□□□ 1.9
SMN2-215ENST00000628696 KCNQ2O43526 872 aa26.94■■□□□ 1.9
SMN2-215ENST00000628696 NME9Q86XW9 330 aa26.93■■□□□ 1.9
SMN2-215ENST00000628696 HDGFL2Q7Z4V5 671 aaPredicted RBP26.92■■□□□ 1.9
SMN2-215ENST00000628696 CCDC7Q96M83 1385 aa26.92■■□□□ 1.9
SMN2-215ENST00000628696 SBNO2Q9Y2G9 1366 aa26.92■■□□□ 1.9
SMN2-215ENST00000628696 SLC12A5Q9H2X9 1139 aa26.91■■□□□ 1.9
SMN2-215ENST00000628696 ANO8Q9HCE9 1232 aaPredicted RBP26.91■■□□□ 1.9
SMN2-215ENST00000628696 USP31Q70CQ4 1352 aa26.9■■□□□ 1.9
SMN2-215ENST00000628696 NLRP2Q9NX02 1062 aa26.9■■□□□ 1.9
SMN2-215ENST00000628696 PROM2Q8N271 834 aa26.89■■□□□ 1.9
SMN2-215ENST00000628696 BCL9O00512 1426 aa26.89■■□□□ 1.89
SMN2-215ENST00000628696 CD163L1Q9NR16 1453 aa26.87■■□□□ 1.89
SMN2-215ENST00000628696 TONSLQ96HA7 1378 aa26.87■■□□□ 1.89
SMN2-215ENST00000628696 LTN1O94822 1766 aa26.87■■□□□ 1.89
SMN2-215ENST00000628696 ABCC6O95255 1503 aa26.87■■□□□ 1.89
SMN2-215ENST00000628696 KAT6BQ8WYB5 2073 aa26.87■■□□□ 1.89
SMN2-215ENST00000628696 TXNRD1Q16881 649 aa26.85■■□□□ 1.89
SMN2-215ENST00000628696 TERF2IPQ9NYB0 399 aa26.85■■□□□ 1.89
SMN2-215ENST00000628696 ERBB3P21860 1342 aa26.85■■□□□ 1.89
SMN2-215ENST00000628696 PDGFDQ9GZP0 370 aaPredicted RBP26.84■■□□□ 1.89
SMN2-215ENST00000628696 TNS2Q63HR2 1409 aa26.83■■□□□ 1.89
SMN2-215ENST00000628696 USP54Q70EL1 1684 aa26.83■■□□□ 1.89
SMN2-215ENST00000628696 ANKRD24Q8TF21 1146 aa26.83■■□□□ 1.89
SMN2-215ENST00000628696 ACSBG1Q96GR2 724 aa26.83■■□□□ 1.89
SMN2-215ENST00000628696 STK32BQ9NY57 414 aa26.82■■□□□ 1.88
SMN2-215ENST00000628696 EDC4Q6P2E9 1401 aaKnown RBP26.82■■□□□ 1.88
SMN2-215ENST00000628696 DCAF8L1A6NGE4 600 aa26.81■■□□□ 1.88
SMN2-215ENST00000628696 ZBTB7AO95365 584 aa26.81■■□□□ 1.88
SMN2-215ENST00000628696 IL2RBP14784 551 aa26.81■■□□□ 1.88
SMN2-215ENST00000628696 CASZ1Q86V15 1759 aa26.81■■□□□ 1.88
SMN2-215ENST00000628696 A0A1W2PP64 1363 aa26.8■■□□□ 1.88
SMN2-215ENST00000628696 NINLQ9Y2I6 1382 aa26.79■■□□□ 1.88
SMN2-215ENST00000628696 YY1P25490 414 aa26.78■■□□□ 1.88
SMN2-215ENST00000628696 SLC15A2Q16348 729 aa26.77■■□□□ 1.88
SMN2-215ENST00000628696 PUS7Q96PZ0 661 aaKnown RBP26.77■■□□□ 1.88
SMN2-215ENST00000628696 ATF5Q9Y2D1 282 aaPredicted RBP26.77■■□□□ 1.88
SMN2-215ENST00000628696 NHSQ6T4R5 1651 aa26.76■■□□□ 1.87
SMN2-215ENST00000628696 LTV1Q96GA3 475 aaPredicted RBP26.76■■□□□ 1.87
SMN2-215ENST00000628696 ST20-MTHFSA0A0A6YYL1 179 aa26.74■■□□□ 1.87
SMN2-215ENST00000628696 IP6K1Q92551 441 aa26.73■■□□□ 1.87
SMN2-215ENST00000628696 DDX54Q8TDD1 881 aaKnown RBP26.71■■□□□ 1.87
SMN2-215ENST00000628696 TESK2Q96S53 571 aa26.71■■□□□ 1.87
SMN2-215ENST00000628696 BTAF1O14981 1849 aa26.71■■□□□ 1.87
SMN2-215ENST00000628696 COG3Q96JB2 828 aa26.7■■□□□ 1.86
SMN2-215ENST00000628696 PTGER2P43116 358 aa26.69■■□□□ 1.86
SMN2-215ENST00000628696 MYOM1P52179 1685 aa26.68■■□□□ 1.86
SMN2-215ENST00000628696 FBLN1P23142 703 aa26.67■■□□□ 1.86
SMN2-215ENST00000628696 AMPHP49418 695 aa26.67■■□□□ 1.86
SMN2-215ENST00000628696 MTFR1LQ9H019 292 aa26.67■■□□□ 1.86
SMN2-215ENST00000628696 SLC24A1O60721 1099 aa26.65■■□□□ 1.86
SMN2-215ENST00000628696 MAP3K19Q56UN5 1328 aa26.65■■□□□ 1.86
SMN2-215ENST00000628696 FAM208AQ9UK61 1670 aaKnown RBP26.64■■□□□ 1.86
SMN2-215ENST00000628696 HOXC9P31274 260 aa26.63■■□□□ 1.85
SMN2-215ENST00000628696 FHDC1Q9C0D6 1143 aaPredicted RBP26.62■■□□□ 1.85
SMN2-215ENST00000628696 RGPD2P0DJD1 1756 aa26.61■■□□□ 1.85
SMN2-215ENST00000628696 SYTL4Q96C24 671 aaPredicted RBP26.61■■□□□ 1.85
SMN2-215ENST00000628696 LRRC4BQ9NT99 713 aa26.61■■□□□ 1.85
SMN2-215ENST00000628696 ZNF827Q17R98 1081 aa26.6■■□□□ 1.85
SMN2-215ENST00000628696 SYT17Q9BSW7 474 aa26.6■■□□□ 1.85
SMN2-215ENST00000628696 ANKRD36BQ8N2N9 1353 aa26.59■■□□□ 1.85
SMN2-215ENST00000628696 PAPPAQ13219 1627 aa26.59■■□□□ 1.85
SMN2-215ENST00000628696 SGIP1Q9BQI5 828 aa26.58■■□□□ 1.85
SMN2-215ENST00000628696 PRIM1P49642 420 aaKnown RBP26.57■■□□□ 1.84
SMN2-215ENST00000628696 TMF1P82094 1093 aa26.57■■□□□ 1.84
SMN2-215ENST00000628696 RRS1Q15050 365 aaKnown RBP26.57■■□□□ 1.84
SMN2-215ENST00000628696 ZCRB1Q8TBF4 217 aaKnown RBP26.57■■□□□ 1.84
SMN2-215ENST00000628696 ARXQ96QS3 562 aa26.57■■□□□ 1.84
SMN2-215ENST00000628696 GGNBP2Q9H3C7 697 aa26.56■■□□□ 1.84
SMN2-215ENST00000628696 SLC27A3Q5K4L6 730 aa26.55■■□□□ 1.84
SMN2-215ENST00000628696 FYB1O15117 783 aa26.54■■□□□ 1.84
SMN2-215ENST00000628696 KCNQ4P56696 695 aa26.54■■□□□ 1.84
SMN2-215ENST00000628696 AKT1S1Q96B36 256 aa26.53■■□□□ 1.84
SMN2-215ENST00000628696 USP47Q96K76 1375 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms